Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222525577

Identifier: 222525577

GI number: 222525577

Start: 2940637

End: 2942217

Strand: Direct

Name: 222525577

Synonym: Chy400_2326

Alternate gene names: NA

Gene position: 2940637-2942217 (Clockwise)

Preceding gene: 222525576

Following gene: 222525578

Centisome position: 55.81

GC content: 57.31

Gene sequence:

>1581_bases
ATGCCGGTTACGCTGTCTTATCCGGGTGTGTACATTGAAGAGGTGCCGAGTGGCGTGCGCACTATCACCGGTGTGGCGAC
ATCGATTACCGCCTTTGTTGGGCGGGCGCGGCGCGGCCCGGTGAATGATCCGGTACGGATTCAGAATTTTGGTGATTATG
AGCGCCTCTTTGGTGGTTTGTGGGAAGCCAGTACGATGAGCTATGCGGTGCAACACTTTTTTCTCAATGGGGGTACCGAT
GCGCTCATCGTGCGCCTGACCAACGGTGCGCAGCGGGCACAGTTCAGCCTCGCATCGGTCAGTGGGCCTGATAACCTGGT
GTTGGAGGCGAGCAGTGAGGGTGCCTGGGGTAATGATTTGCGGATTGCGATTGATCACGATACCCGTCCTTTGAGCAGCG
CCGAGGCTGATAAGGTCTTTAATCTGACCGTGGTTGAGGTTGTGCCGGGGAGCAATCCGTTGCAGGCGGCGCGGCGGGAA
ACGTTCCGTAATGTCTCGATTGATCCGACGGCGCCGAGCTATGTGGGAACAGTGCTGGCTCAGGAGTCGCTGCTGTTACG
GGTGCCCGATCCGTATCCCGGTACGTTCCCGACGGTGCGTCCGGCGGTTGCTGGCACAGCAGGTGATCTCAGTACCTTCA
CCGCGCCAACGACGAACGGTTCTGATGGCAATCCACTGACCAGTGCGCAATACGAGGGTAGTTTTGATGATAAGACCGGT
GTGTATGCTCTGCGAAAGGCCGATCTCTTCAATTTGCTCTGTATCCCGCCGTTTACCCGTGATACGGATGTGAGTGAGGC
GGTCTGGACGAGGGCTCTGCAATTTTGCCGCTCGGAGCGGGCATTTCTGATCATCGATGCGCCATCTGGCTGGAAGAGTA
TTGCAGCGGCGGTAAGTGGGATTGGTACGTTCAGTGCGGCAGTGGCGCGGGATGATCACGCGGCGATCTATTTTCCGCGG
GTGCGGATACCCGATCCGTTGCGCGAGAATCGCCTGGAGGAATTTGCTCCCTGTGGTGCGGTTGCCGGTGTTTTTGCCCG
TACTGACGCGCAGCGTGGGGTGTGGAAGGCACCGGCTGGTCAGGACGCGACCCTGTTCGGTGTGCGGGCGTTAGCCGTCA
ATCTTACCGATGGCGAGCAAGGGCAGCTCAATCCGTTGGGAGTGAATTGTCTGCGTTCATTTCCGGTCAGTGGCAATGTG
GTTTGGGGGGCACGCACGTACCGGGGTGCCGATCAGTTGGCGTCGGAATGGAAGTATATTCCGGTGCGTCGGCTGGCGTT
GTTTATCGAAGAGACGCTCTACCGCAGTCTGCAATGGGTGGTCTTCGAGCCGAATGATGAACCGTTGTGGTCACAAATTC
GCTTGAACGTCGGTGCCTTTATGCAAACGCTCTTTCGCCAGGGTGCGTTTCAAGGTCGCTCCCCGCGTGAAGCGTATCTG
GTGAAGTGTGACCGTGAGACAACGACCCAAACCGACATCAATATGGGTGTGGTCAATATCGTGGTTGGGTTTGCGCCACT
CAAACCGGCTGAATTTGTCATTATCAAGATTCAGCAGTTGGCCGGTCAGATTGCAGTCTGA

Upstream 100 bases:

>100_bases
AGCGGTAGTACTGTTGCAAGCCGCGGAGTTGCGCTGATGAGATGGGGTGGGCTGGTGAGTCTGGGTGGCGGAGAGGTCGG
TCTGTTCAAGGAGCAATTGT

Downstream 100 bases:

>100_bases
TCGAAACTCTCTGCGGCTTGTCACTTCGGAGCGGGGTCGGGGGTGAGCGGTTGGATTTGCAGCGATAAGGGGACACTCTA
TGGCTCAGTTTAGCGTGAAT

Product: tail sheath protein

Products: NA

Alternate protein names: Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein Gp; Phage Tail Sheath Family Protein; Phage Tail Sheath Protein FI-Like Protein; Phage Tail Sheath Protein Fi-Like Protein; LOW QUALITY PROTEIN Phage Tail Sheath Protein; Cytoplasmic Fibril Protein; Phage Tail Sheath Protein Fi-Like; Phage SPO1 DNA Polymerase-Related Protein; Bacteriophage Tail Sheath Protein; Phage Protein

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MPVTLSYPGVYIEEVPSGVRTITGVATSITAFVGRARRGPVNDPVRIQNFGDYERLFGGLWEASTMSYAVQHFFLNGGTD
ALIVRLTNGAQRAQFSLASVSGPDNLVLEASSEGAWGNDLRIAIDHDTRPLSSAEADKVFNLTVVEVVPGSNPLQAARRE
TFRNVSIDPTAPSYVGTVLAQESLLLRVPDPYPGTFPTVRPAVAGTAGDLSTFTAPTTNGSDGNPLTSAQYEGSFDDKTG
VYALRKADLFNLLCIPPFTRDTDVSEAVWTRALQFCRSERAFLIIDAPSGWKSIAAAVSGIGTFSAAVARDDHAAIYFPR
VRIPDPLRENRLEEFAPCGAVAGVFARTDAQRGVWKAPAGQDATLFGVRALAVNLTDGEQGQLNPLGVNCLRSFPVSGNV
VWGARTYRGADQLASEWKYIPVRRLALFIEETLYRSLQWVVFEPNDEPLWSQIRLNVGAFMQTLFRQGAFQGRSPREAYL
VKCDRETTTQTDINMGVVNIVVGFAPLKPAEFVIIKIQQLAGQIAV

Sequences:

>Translated_526_residues
MPVTLSYPGVYIEEVPSGVRTITGVATSITAFVGRARRGPVNDPVRIQNFGDYERLFGGLWEASTMSYAVQHFFLNGGTD
ALIVRLTNGAQRAQFSLASVSGPDNLVLEASSEGAWGNDLRIAIDHDTRPLSSAEADKVFNLTVVEVVPGSNPLQAARRE
TFRNVSIDPTAPSYVGTVLAQESLLLRVPDPYPGTFPTVRPAVAGTAGDLSTFTAPTTNGSDGNPLTSAQYEGSFDDKTG
VYALRKADLFNLLCIPPFTRDTDVSEAVWTRALQFCRSERAFLIIDAPSGWKSIAAAVSGIGTFSAAVARDDHAAIYFPR
VRIPDPLRENRLEEFAPCGAVAGVFARTDAQRGVWKAPAGQDATLFGVRALAVNLTDGEQGQLNPLGVNCLRSFPVSGNV
VWGARTYRGADQLASEWKYIPVRRLALFIEETLYRSLQWVVFEPNDEPLWSQIRLNVGAFMQTLFRQGAFQGRSPREAYL
VKCDRETTTQTDINMGVVNIVVGFAPLKPAEFVIIKIQQLAGQIAV
>Mature_525_residues
PVTLSYPGVYIEEVPSGVRTITGVATSITAFVGRARRGPVNDPVRIQNFGDYERLFGGLWEASTMSYAVQHFFLNGGTDA
LIVRLTNGAQRAQFSLASVSGPDNLVLEASSEGAWGNDLRIAIDHDTRPLSSAEADKVFNLTVVEVVPGSNPLQAARRET
FRNVSIDPTAPSYVGTVLAQESLLLRVPDPYPGTFPTVRPAVAGTAGDLSTFTAPTTNGSDGNPLTSAQYEGSFDDKTGV
YALRKADLFNLLCIPPFTRDTDVSEAVWTRALQFCRSERAFLIIDAPSGWKSIAAAVSGIGTFSAAVARDDHAAIYFPRV
RIPDPLRENRLEEFAPCGAVAGVFARTDAQRGVWKAPAGQDATLFGVRALAVNLTDGEQGQLNPLGVNCLRSFPVSGNVV
WGARTYRGADQLASEWKYIPVRRLALFIEETLYRSLQWVVFEPNDEPLWSQIRLNVGAFMQTLFRQGAFQGRSPREAYLV
KCDRETTTQTDINMGVVNIVVGFAPLKPAEFVIIKIQQLAGQIAV

Specific function: Unknown

COG id: COG3497

COG function: function code R; Phage tail sheath protein FI

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57155; Mature: 57024

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTLSYPGVYIEEVPSGVRTITGVATSITAFVGRARRGPVNDPVRIQNFGDYERLFGGL
CCEEECCCCEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHH
WEASTMSYAVQHFFLNGGTDALIVRLTNGAQRAQFSLASVSGPDNLVLEASSEGAWGNDL
HHHHHHHHHHHHHEECCCCCEEEEEECCCCCHHEEEEEECCCCCCEEEEECCCCCCCCCE
RIAIDHDTRPLSSAEADKVFNLTVVEVVPGSNPLQAARRETFRNVSIDPTAPSYVGTVLA
EEEEECCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QESLLLRVPDPYPGTFPTVRPAVAGTAGDLSTFTAPTTNGSDGNPLTSAQYEGSFDDKTG
CCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
VYALRKADLFNLLCIPPFTRDTDVSEAVWTRALQFCRSERAFLIIDAPSGWKSIAAAVSG
EEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC
IGTFSAAVARDDHAAIYFPRVRIPDPLRENRLEEFAPCGAVAGVFARTDAQRGVWKAPAG
CHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
QDATLFGVRALAVNLTDGEQGQLNPLGVNCLRSFPVSGNVVWGARTYRGADQLASEWKYI
CCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCHHHHHHCCCCC
PVRRLALFIEETLYRSLQWVVFEPNDEPLWSQIRLNVGAFMQTLFRQGAFQGRSPREAYL
HHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
VKCDRETTTQTDINMGVVNIVVGFAPLKPAEFVIIKIQQLAGQIAV
EEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCCC
>Mature Secondary Structure 
PVTLSYPGVYIEEVPSGVRTITGVATSITAFVGRARRGPVNDPVRIQNFGDYERLFGGL
CEEECCCCEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHH
WEASTMSYAVQHFFLNGGTDALIVRLTNGAQRAQFSLASVSGPDNLVLEASSEGAWGNDL
HHHHHHHHHHHHHEECCCCCEEEEEECCCCCHHEEEEEECCCCCCEEEEECCCCCCCCCE
RIAIDHDTRPLSSAEADKVFNLTVVEVVPGSNPLQAARRETFRNVSIDPTAPSYVGTVLA
EEEEECCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QESLLLRVPDPYPGTFPTVRPAVAGTAGDLSTFTAPTTNGSDGNPLTSAQYEGSFDDKTG
CCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
VYALRKADLFNLLCIPPFTRDTDVSEAVWTRALQFCRSERAFLIIDAPSGWKSIAAAVSG
EEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC
IGTFSAAVARDDHAAIYFPRVRIPDPLRENRLEEFAPCGAVAGVFARTDAQRGVWKAPAG
CHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
QDATLFGVRALAVNLTDGEQGQLNPLGVNCLRSFPVSGNVVWGARTYRGADQLASEWKYI
CCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCHHHHHHCCCCC
PVRRLALFIEETLYRSLQWVVFEPNDEPLWSQIRLNVGAFMQTLFRQGAFQGRSPREAYL
HHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
VKCDRETTTQTDINMGVVNIVVGFAPLKPAEFVIIKIQQLAGQIAV
EEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA