| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525447
Identifier: 222525447
GI number: 222525447
Start: 2780964
End: 2782133
Strand: Direct
Name: 222525447
Synonym: Chy400_2195
Alternate gene names: NA
Gene position: 2780964-2782133 (Clockwise)
Preceding gene: 222525446
Following gene: 222525448
Centisome position: 52.78
GC content: 56.92
Gene sequence:
>1170_bases ATGACACCTTTACGCATCGTGACCGGAATTGCCGTGATCTGGCTGATATTTGATCCGCAGCCGGTCGTTGGCTTTGTGGC CTACACCCTGATAGGTCTCCAGGTCATAGGCTGGTTCTGGCCACGCATTGCCCGTAACCAGATCACCTGGCAACGGTGTG CACCTCTGGCGCTGGCACCCGATGAGGTAGCCGAGGTCGAGATTCACGTGACCTACCGTGGCTGGTTGCCGTTACCATAC CTGGTGGTGCGGGAGGACATTCCGGTTATGCTAGGTAATGTCCCCCGCCGGGAATGGGTGCTGAGCCTCTGGCCCGGCCA GAGGCATACCCTGCGCTACCCGATTCAATGCCGTCAGCGTGGTCTCTACTGGTTGGGGCCACTCAGCCTGCGGATTGGCT CGGTGTTTGAGCAGAATGAGATTCAGCTTACTGAACAGCAACCAACACCAATCACTGTCACCCCGGCAGTCGTTTCGTTG CGCTTGCTTCATCTGATCGCAGCTCTCCCTTACAGTCAGGAGCGCTATCACCTGAGTCTGTTCGAGGACGCTACTCAGAA AACTGGCGTTCGTACCTATCAGGTGGGCGATCCGCCGCGACGGATCGACTGGAAAACAAGCGCACGTCTCGGTGATCTTC AGGTACGTGAATTGACCCCTACCATTGCCCGTGAAACCCTGATCGTGCTGGCTTTTGCCGAGGCTGAGTATCCGGGGCGG TTTGCCTACGACAATCGTGAACGGGCAGTTGTTGCCACAGCTTCCCTGGCTTCCACGCTTATCCAGCGGCGTCAGGCAGT TGGCTTGTGCAGCAACGGCTACGATCCGTTACACCGCAAAGCTGGCATCACGTTGTTGCCTGCGACCGGCATTGAACATC TGCGCGAACTATTGGTTCGCCTCGGTCGGCTCGAACCGGCGACAGACGTGCCACTGATCGAAGAGGTAATAACGGGCGAG CCTATCCTACGTCCCGGCGCAACCCTGGTTCTGATCACCGGTGCCCTGAGCACCCAAATCCTGACGACTCTGGTGACTAT CCGTCAACGTGCAATGAAAGTGGTATTGGTCCTGACCGATCCGTTTCTGAGCGATCTTCTCCAGGCCCAACAGTATGGTA TCGTCACGTTGCAAATAGATCGTACAGGTGCGATTATTCCTTGTGCGTGA
Upstream 100 bases:
>100_bases CCGGTAGAGACGCGGCGCGTGCTGGCGTTGGGACTGGCGGCTGCCGCCGAAGCGCCGGTGCAACCGACCCGTTTCGGCGT CTTTCGCATGTAGGTCTGCC
Downstream 100 bases:
>100_bases AAAGTAATAAACGCTGTCGTTTATGCCGGTGCAGTACATAATGAGGAGACATTGCTATGCTGCGCATTGCTGAAGAAGTT ACCACTGCGCTCGAAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTPLRIVTGIAVIWLIFDPQPVVGFVAYTLIGLQVIGWFWPRIARNQITWQRCAPLALAPDEVAEVEIHVTYRGWLPLPY LVVREDIPVMLGNVPRREWVLSLWPGQRHTLRYPIQCRQRGLYWLGPLSLRIGSVFEQNEIQLTEQQPTPITVTPAVVSL RLLHLIAALPYSQERYHLSLFEDATQKTGVRTYQVGDPPRRIDWKTSARLGDLQVRELTPTIARETLIVLAFAEAEYPGR FAYDNRERAVVATASLASTLIQRRQAVGLCSNGYDPLHRKAGITLLPATGIEHLRELLVRLGRLEPATDVPLIEEVITGE PILRPGATLVLITGALSTQILTTLVTIRQRAMKVVLVLTDPFLSDLLQAQQYGIVTLQIDRTGAIIPCA
Sequences:
>Translated_389_residues MTPLRIVTGIAVIWLIFDPQPVVGFVAYTLIGLQVIGWFWPRIARNQITWQRCAPLALAPDEVAEVEIHVTYRGWLPLPY LVVREDIPVMLGNVPRREWVLSLWPGQRHTLRYPIQCRQRGLYWLGPLSLRIGSVFEQNEIQLTEQQPTPITVTPAVVSL RLLHLIAALPYSQERYHLSLFEDATQKTGVRTYQVGDPPRRIDWKTSARLGDLQVRELTPTIARETLIVLAFAEAEYPGR FAYDNRERAVVATASLASTLIQRRQAVGLCSNGYDPLHRKAGITLLPATGIEHLRELLVRLGRLEPATDVPLIEEVITGE PILRPGATLVLITGALSTQILTTLVTIRQRAMKVVLVLTDPFLSDLLQAQQYGIVTLQIDRTGAIIPCA >Mature_388_residues TPLRIVTGIAVIWLIFDPQPVVGFVAYTLIGLQVIGWFWPRIARNQITWQRCAPLALAPDEVAEVEIHVTYRGWLPLPYL VVREDIPVMLGNVPRREWVLSLWPGQRHTLRYPIQCRQRGLYWLGPLSLRIGSVFEQNEIQLTEQQPTPITVTPAVVSLR LLHLIAALPYSQERYHLSLFEDATQKTGVRTYQVGDPPRRIDWKTSARLGDLQVRELTPTIARETLIVLAFAEAEYPGRF AYDNRERAVVATASLASTLIQRRQAVGLCSNGYDPLHRKAGITLLPATGIEHLRELLVRLGRLEPATDVPLIEEVITGEP ILRPGATLVLITGALSTQILTTLVTIRQRAMKVVLVLTDPFLSDLLQAQQYGIVTLQIDRTGAIIPCA
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43666; Mature: 43535
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLRIVTGIAVIWLIFDPQPVVGFVAYTLIGLQVIGWFWPRIARNQITWQRCAPLALAP CCCHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEECC DEVAEVEIHVTYRGWLPLPYLVVREDIPVMLGNVPRREWVLSLWPGQRHTLRYPIQCRQR CCCEEEEEEEEEECCCCCCEEEEECCCCCEECCCCCHHEEEEECCCCCCEEECCHHHHHC GLYWLGPLSLRIGSVFEQNEIQLTEQQPTPITVTPAVVSLRLLHLIAALPYSQERYHLSL CCEEECCHHHHHCCCCCCCCEEEECCCCCCEEECHHHHHHHHHHHHHHCCCCCCCEEEEH FEDATQKTGVRTYQVGDPPRRIDWKTSARLGDLQVRELTPTIARETLIVLAFAEAEYPGR HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHCEEEEEEEECCCCCCC FAYDNRERAVVATASLASTLIQRRQAVGLCSNGYDPLHRKAGITLLPATGIEHLRELLVR CCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCHHHHHHHHHH LGRLEPATDVPLIEEVITGEPILRPGATLVLITGALSTQILTTLVTIRQRAMKVVLVLTD HHCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHEEEEEEEEC PFLSDLLQAQQYGIVTLQIDRTGAIIPCA HHHHHHHHHHHCCEEEEEECCCCCEEECC >Mature Secondary Structure TPLRIVTGIAVIWLIFDPQPVVGFVAYTLIGLQVIGWFWPRIARNQITWQRCAPLALAP CCHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEECC DEVAEVEIHVTYRGWLPLPYLVVREDIPVMLGNVPRREWVLSLWPGQRHTLRYPIQCRQR CCCEEEEEEEEEECCCCCCEEEEECCCCCEECCCCCHHEEEEECCCCCCEEECCHHHHHC GLYWLGPLSLRIGSVFEQNEIQLTEQQPTPITVTPAVVSLRLLHLIAALPYSQERYHLSL CCEEECCHHHHHCCCCCCCCEEEECCCCCCEEECHHHHHHHHHHHHHHCCCCCCCEEEEH FEDATQKTGVRTYQVGDPPRRIDWKTSARLGDLQVRELTPTIARETLIVLAFAEAEYPGR HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHCEEEEEEEECCCCCCC FAYDNRERAVVATASLASTLIQRRQAVGLCSNGYDPLHRKAGITLLPATGIEHLRELLVR CCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCHHHHHHHHHH LGRLEPATDVPLIEEVITGEPILRPGATLVLITGALSTQILTTLVTIRQRAMKVVLVLTD HHCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHEEEEEEEEC PFLSDLLQAQQYGIVTLQIDRTGAIIPCA HHHHHHHHHHHCCEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA