| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is psuG
Identifier: 222525448
GI number: 222525448
Start: 2782190
End: 2783107
Strand: Direct
Name: psuG
Synonym: Chy400_2196
Alternate gene names: 222525448
Gene position: 2782190-2783107 (Clockwise)
Preceding gene: 222525447
Following gene: 222525449
Centisome position: 52.8
GC content: 60.78
Gene sequence:
>918_bases ATGCTGCGCATTGCTGAAGAAGTTACCACTGCGCTCGAAGAAGGGCGGGCAGTGGTTGCGCTGGAGAGCACATTAATTAG CCACGGCCTTCCCTACCCCCACAACCTGGCCGTAGCGGAGGGTCTGGAAGCCGAAGTGCGTGCTGCGGGTGCGGTACCGG CGACTATCGGTCTGATCGAAGGAGTGCCGGTCATTGGTCTGAATGGCAATGAGCTGGAACGGCTGGCGGTTGGTGGTGAT CGGGTGCGCAAGTTGAGTCGGCGTGATATTGGTGCGGCAATTGTCGATCACGCCGATGGCGCCACAACAGTGGCGGCAAC GATGGCGCTCGCGGCTGCGGCTGGGATTGAGGTCTTCGCTACCGGTGGGATTGGCGGCGTTCATCGTGGCGCAACCCATA GCTGGGATGTGAGTGCCGATCTGACCGAATTGGGTCGTACACCTGTGCTGGTTGTGTGTGCTGGTGCGAAGGCAATCCTC GACCTGCCGGCGACGCTCGAATACCTGGAGACTCAGGGCGTACCGGTGGTTGGCTACCAGACGGTAGAATTCCCGGCCTT TTACACACCCCATAGCGGCCTGACAGTAGCGGCTGTGGCGGCTGATGCGCTGGCAGCCGCCCGAATGTGGCGTATTCAGC GCCGTTACCACACATTTGCTGCTCCTGGCGGTATGCTGCTCTGCGTCCCCCCACCAGAACGCCATGCCCTGGAACGAGAG GCTGTCGAAGCCGCGATTGGTCGGGCATTGGCTCGTGCTGAGGCAGAAGGTGTGCGTGGGCCGGCAGTCACGCCGTTTCT CCTGGCAGCAATGGCCGAAGAGACCAGCGGCGAGAGTATCGAGACTAACATCGCTTTGCTGCGAAACAATACCCGTGTAG CCGCTGAAGTTGCGGTTCGGATCAGTGAATTGGGTTGA
Upstream 100 bases:
>100_bases CGTTGCAAATAGATCGTACAGGTGCGATTATTCCTTGTGCGTGAAAAGTAATAAACGCTGTCGTTTATGCCGGTGCAGTA CATAATGAGGAGACATTGCT
Downstream 100 bases:
>100_bases AACCTGGGTGAACAAACCGTGTGCAAAGTACTTGACAAATTGCGTTATTGCTTTTATACTAACTATCGCTGTTATCAGAT GTAACAGCTTGCACCGTCAC
Product: Indigoidine synthase A family protein
Products: NA
Alternate protein names: PsiMP glycosidase
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MLRIAEEVTTALEEGRAVVALESTLISHGLPYPHNLAVAEGLEAEVRAAGAVPATIGLIEGVPVIGLNGNELERLAVGGD RVRKLSRRDIGAAIVDHADGATTVAATMALAAAAGIEVFATGGIGGVHRGATHSWDVSADLTELGRTPVLVVCAGAKAIL DLPATLEYLETQGVPVVGYQTVEFPAFYTPHSGLTVAAVAADALAAARMWRIQRRYHTFAAPGGMLLCVPPPERHALERE AVEAAIGRALARAEAEGVRGPAVTPFLLAAMAEETSGESIETNIALLRNNTRVAAEVAVRISELG
Sequences:
>Translated_305_residues MLRIAEEVTTALEEGRAVVALESTLISHGLPYPHNLAVAEGLEAEVRAAGAVPATIGLIEGVPVIGLNGNELERLAVGGD RVRKLSRRDIGAAIVDHADGATTVAATMALAAAAGIEVFATGGIGGVHRGATHSWDVSADLTELGRTPVLVVCAGAKAIL DLPATLEYLETQGVPVVGYQTVEFPAFYTPHSGLTVAAVAADALAAARMWRIQRRYHTFAAPGGMLLCVPPPERHALERE AVEAAIGRALARAEAEGVRGPAVTPFLLAAMAEETSGESIETNIALLRNNTRVAAEVAVRISELG >Mature_305_residues MLRIAEEVTTALEEGRAVVALESTLISHGLPYPHNLAVAEGLEAEVRAAGAVPATIGLIEGVPVIGLNGNELERLAVGGD RVRKLSRRDIGAAIVDHADGATTVAATMALAAAAGIEVFATGGIGGVHRGATHSWDVSADLTELGRTPVLVVCAGAKAIL DLPATLEYLETQGVPVVGYQTVEFPAFYTPHSGLTVAAVAADALAAARMWRIQRRYHTFAAPGGMLLCVPPPERHALERE AVEAAIGRALARAEAEGVRGPAVTPFLLAAMAEETSGESIETNIALLRNNTRVAAEVAVRISELG
Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil
COG id: COG2313
COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family
Homologues:
Organism=Escherichia coli, GI1788490, Length=304, Percent_Identity=49.671052631579, Blast_Score=272, Evalue=2e-74, Organism=Caenorhabditis elegans, GI25147470, Length=304, Percent_Identity=46.3815789473684, Blast_Score=262, Evalue=1e-70, Organism=Drosophila melanogaster, GI24580669, Length=302, Percent_Identity=49.0066225165563, Blast_Score=268, Evalue=4e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSUG_CHLSY (B9LGZ1)
Other databases:
- EMBL: CP001364 - RefSeq: YP_002569919.1 - ProteinModelPortal: B9LGZ1 - SMR: B9LGZ1 - GeneID: 7405510 - GenomeReviews: CP001364_GR - KEGG: chl:Chy400_2196 - OMA: PATIAVM - ProtClustDB: CLSK862888 - HAMAP: MF_01876 - InterPro: IPR022830 - InterPro: IPR007342 - PANTHER: PTHR10584:SF1
Pfam domain/function: PF04227 Indigoidine_A; SSF110581 Indigdn_synthA
EC number: NA
Molecular weight: Translated: 31605; Mature: 31605
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIAEEVTTALEEGRAVVALESTLISHGLPYPHNLAVAEGLEAEVRAAGAVPATIGLIE CCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCHHHCCCCHHHHHCCCCHHHHHHHC GVPVIGLNGNELERLAVGGDRVRKLSRRDIGAAIVDHADGATTVAATMALAAAAGIEVFA CCCEEECCCCCHHHEECCHHHHHHHHHHHHCHHEEECCCCHHHHHHHHHHHHHCCEEEEE TGGIGGVHRGATHSWDVSADLTELGRTPVLVVCAGAKAILDLPATLEYLETQGVPVVGYQ ECCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHCCCCEEEEE TVEFPAFYTPHSGLTVAAVAADALAAARMWRIQRRYHTFAAPGGMLLCVPPPERHALERE EEECCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH AVEAAIGRALARAEAEGVRGPAVTPFLLAAMAEETSGESIETNIALLRNNTRVAAEVAVR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEHHHHHH ISELG HHCCC >Mature Secondary Structure MLRIAEEVTTALEEGRAVVALESTLISHGLPYPHNLAVAEGLEAEVRAAGAVPATIGLIE CCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCHHHCCCCHHHHHCCCCHHHHHHHC GVPVIGLNGNELERLAVGGDRVRKLSRRDIGAAIVDHADGATTVAATMALAAAAGIEVFA CCCEEECCCCCHHHEECCHHHHHHHHHHHHCHHEEECCCCHHHHHHHHHHHHHCCEEEEE TGGIGGVHRGATHSWDVSADLTELGRTPVLVVCAGAKAILDLPATLEYLETQGVPVVGYQ ECCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHCCCCEEEEE TVEFPAFYTPHSGLTVAAVAADALAAARMWRIQRRYHTFAAPGGMLLCVPPPERHALERE EEECCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH AVEAAIGRALARAEAEGVRGPAVTPFLLAAMAEETSGESIETNIALLRNNTRVAAEVAVR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEHHHHHH ISELG HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA