| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is malT [H]
Identifier: 222525334
GI number: 222525334
Start: 2639867
End: 2642617
Strand: Reverse
Name: malT [H]
Synonym: Chy400_2077
Alternate gene names: 222525334
Gene position: 2642617-2639867 (Counterclockwise)
Preceding gene: 222525338
Following gene: 222525332
Centisome position: 50.15
GC content: 54.45
Gene sequence:
>2751_bases ATGATGCCACTTGTGCGCACCAAATTGCAGCCGCCGGAAGTGCGGCCTTCGTTGCTTCCACGTCCCCGCTTGTACGAACA GTTACGGCTTGCCCTGCACAGTCGATTGGTATTGATTGCGGCACCGGCCGGCTACGGTAAAACATCGTTGCTGGCTGAAT GGATTGTTGAGGCCCGCAAAGAATGGTCACACATTGCCTGGTTGAGTCTTGATGAGACCGACAATGATATTCGCCGTTTA CTGGCCTACTTGCTGGAGGCGTTGAGTAATTTGCCACATGAGCGACGTGCACAGTTGCAGGCACTGTTAAGTGAAGACTC TGAAATTGATACGACACAATGGTGTGCTGAACTACTGAACGATCTGGCCGAGACAGCCGGGCCAACGGTCATTGTGCTCG ATGACTACCATCTGATCAACGATCCGCTCATTCATAACGCGATTACCTTTCTCATCGATCACCTGCCACCCCGTTGCCGT TTACTGATTGCCAGCCGCCGCGATCCACCACTGCCTCTGGCGCGCTGGCGCGCCCGTGGTCATCTCACCGAGTTGCGTAG TTTCGATTTGGCCTTTAACCCTGAAGAGACGGCAGCCTTTCTGCTTGAAACGATGGAACTACCCTTGAGTCGCGATCAGA TCGTGGCATTACTGGAAAGTACTGAGGGCTGGCCGGCCGGCTTACGACTGATTGCACTGGCGATCCGTGATCGGGTTAAC CGTGGTGAATTGATTGATGAATTAATCAGTGGTAATCGCTACGTTGCAGATTATTTAATTGAAGATGTATTTAACCATTT ATCACACCAGTTACAACAATTTCTCCTTCAGACATCCATCCTCGATCAGTTGTGTGGAGCGCTATGCGATGCAGTTATCG GTGTCCATGATGAAACAGAGGTACGAACACCGGTTCAATCAAGTCAACAAATCCTGACCGAACTTGAGCGTAACAATCTC TTTCTCTTTCCGCTCGGTAGCGAGCGGGTCTGGTACCGGTATCATCATCTGTTCGCCGAGGTTTTACGGGATCGACTGAT GGCAAGTCACTCACCAGACCAGGTGGCGATCCTGCATCGTCGGGCCGGGGCGTGGTACGCAGCGCATGGCATGCTGACGC AAGCAGTCAACCATGCGTTGCAGGCACAGGCATTTGACGATGTTGTTGCTATGCTGGAACCAATTGGTTTAGCGGTCATT TCACAGGTCGGCGAGGTAACGCTCCGGCGATGGTTACCATCTCTTCCTGTAGAGGCTTTTGAGCGTCATCCACGACTGGC TCTCTTACGAGCCTGGCTGGCGACGGCAGATTATCAGGTTGATGAGGCTGCCCATTGGATTGCGGTTGCCGAACGCGCCC TGGCCGGCGTCGCCAGTGGTGCAGCAACGCCTATTGGACCAATTGCGAATTTACGCGGTGAATTGAGTGCGGTACGGGTA CGTCTGGCGGCCTTACAGGGTGATACCGATCAGGTGATAGCAGAAGGAAAACAGGCGCTGAACTGGTTGCAGAGCGATTA CCAATCACTACGGATGCGAATCGCCAAAGACCTGGGTTACGCCTGTATTGCCCAACGCGATCTGGTACGGGCAGAGCAGT CGTTCAGCGAAGCCATGGTCAACGGCTTTCACGTTGGCCTGCCGTACATTTCAGCAATGGCAACGATCGATTACGCCTAT ACGCTCATGCTGCGTGGCGCATACACGAACGCGATTAATGCCTGCCGGGATACCATCGATCAAATGATGCATCACCAGCG TAATCGAACCGTTCCTGGTATTGGCTTACCCTTCCTGGCCCTGGCCGACCTGCATACGATCCGCCACGAATTTGCCGGTG CCTTACCGGCCCTGGCCGAAGCGGAAAGTGCGATCAAGTCAGGACATACCACCAGTTATCTCTGTCTGCTGATCGTCATG GCACGGGTAGCCCGTGCCCGCAATGATCTCCCCGGTGCGCTACGGATCATCCGGCAGGCCCGCTTTATGGCGCGCCAGCG GCGAGTGGGCTGGGTACGTGCTGTACTGGATGGTTTAGAGTCTCAAATTATGATCGAGCAGGGTGATTTGGAAGCAGCCG GCCAACTCATCACCAACATTGTGGCCACGCCAAGTGAGTTTCAATATCTGCCAACAGCAGCATTTTATGCTCGTGAACAC ATAACTCGTGCTCACTATGAATGGCGGCTGGCTCACTACCAGGACACTGGCGACTGTCAGGCACTTCACGATCTGGCAAT GGAATTAAGTACACCATCAGGCACAGAACTCTGGCAACGTCTCTCACCACTCGATGCGGCATTGCTGCGCGGATTGGCCC TGGCAGCAGCCGGTGACGATGCCACAGAGGCTATCCTGAGCGCACTCGATCTGGCGACCAGCGAACGGATTGTTACCCCT TTTCAACAGGCAGGTGAACCGCTACGCCGCATCCTCAACCAGCTTTTGAGCCGGCAACGACTGCCACCGTTTGGGGAATA CCTGCTCTCGCTCCTTGACGATTATGAACCTTCGCCGATTGCTGTACTGAGCACGCCTTCATCTGATGCGCTGCCCGAAC CGCTCAGCCAGCGTGAGATCGAGGTACTACGGTTGATGGCCGAAGGGCGCAGCAACCAGGAGATTGCCGGTCACCTGATT ATTGCCATCAGTACGGTAAAATCGCATGTTAACAACATCTTTAGTAAACTGGGCGTCGCCTCGCGCACGCAAGCGGTAGC ACGCGGGCGACGGCTCGGTCTGATTCCTTAA
Upstream 100 bases:
>100_bases AACACCGACCTACCATTCGGGCATCAGCCGTGGTAGACTAGATAGTGCAACGGTGTTCCAAACCAGCTACCAACTTTCCA TCATTGCACGGAGACGGCAT
Downstream 100 bases:
>100_bases TGACGCTTCAGACGATGACGAATATCAATCACATCACGTAGCATAGCCTGACAGGTACCGAGAGGGCCATCTTCGAGACT GCTGACCGTTGAACGACCGG
Product: LuxR family ATP-dependent transcriptional regulator
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 916; Mature: 916
Protein sequence:
>916_residues MMPLVRTKLQPPEVRPSLLPRPRLYEQLRLALHSRLVLIAAPAGYGKTSLLAEWIVEARKEWSHIAWLSLDETDNDIRRL LAYLLEALSNLPHERRAQLQALLSEDSEIDTTQWCAELLNDLAETAGPTVIVLDDYHLINDPLIHNAITFLIDHLPPRCR LLIASRRDPPLPLARWRARGHLTELRSFDLAFNPEETAAFLLETMELPLSRDQIVALLESTEGWPAGLRLIALAIRDRVN RGELIDELISGNRYVADYLIEDVFNHLSHQLQQFLLQTSILDQLCGALCDAVIGVHDETEVRTPVQSSQQILTELERNNL FLFPLGSERVWYRYHHLFAEVLRDRLMASHSPDQVAILHRRAGAWYAAHGMLTQAVNHALQAQAFDDVVAMLEPIGLAVI SQVGEVTLRRWLPSLPVEAFERHPRLALLRAWLATADYQVDEAAHWIAVAERALAGVASGAATPIGPIANLRGELSAVRV RLAALQGDTDQVIAEGKQALNWLQSDYQSLRMRIAKDLGYACIAQRDLVRAEQSFSEAMVNGFHVGLPYISAMATIDYAY TLMLRGAYTNAINACRDTIDQMMHHQRNRTVPGIGLPFLALADLHTIRHEFAGALPALAEAESAIKSGHTTSYLCLLIVM ARVARARNDLPGALRIIRQARFMARQRRVGWVRAVLDGLESQIMIEQGDLEAAGQLITNIVATPSEFQYLPTAAFYAREH ITRAHYEWRLAHYQDTGDCQALHDLAMELSTPSGTELWQRLSPLDAALLRGLALAAAGDDATEAILSALDLATSERIVTP FQQAGEPLRRILNQLLSRQRLPPFGEYLLSLLDDYEPSPIAVLSTPSSDALPEPLSQREIEVLRLMAEGRSNQEIAGHLI IAISTVKSHVNNIFSKLGVASRTQAVARGRRLGLIP
Sequences:
>Translated_916_residues MMPLVRTKLQPPEVRPSLLPRPRLYEQLRLALHSRLVLIAAPAGYGKTSLLAEWIVEARKEWSHIAWLSLDETDNDIRRL LAYLLEALSNLPHERRAQLQALLSEDSEIDTTQWCAELLNDLAETAGPTVIVLDDYHLINDPLIHNAITFLIDHLPPRCR LLIASRRDPPLPLARWRARGHLTELRSFDLAFNPEETAAFLLETMELPLSRDQIVALLESTEGWPAGLRLIALAIRDRVN RGELIDELISGNRYVADYLIEDVFNHLSHQLQQFLLQTSILDQLCGALCDAVIGVHDETEVRTPVQSSQQILTELERNNL FLFPLGSERVWYRYHHLFAEVLRDRLMASHSPDQVAILHRRAGAWYAAHGMLTQAVNHALQAQAFDDVVAMLEPIGLAVI SQVGEVTLRRWLPSLPVEAFERHPRLALLRAWLATADYQVDEAAHWIAVAERALAGVASGAATPIGPIANLRGELSAVRV RLAALQGDTDQVIAEGKQALNWLQSDYQSLRMRIAKDLGYACIAQRDLVRAEQSFSEAMVNGFHVGLPYISAMATIDYAY TLMLRGAYTNAINACRDTIDQMMHHQRNRTVPGIGLPFLALADLHTIRHEFAGALPALAEAESAIKSGHTTSYLCLLIVM ARVARARNDLPGALRIIRQARFMARQRRVGWVRAVLDGLESQIMIEQGDLEAAGQLITNIVATPSEFQYLPTAAFYAREH ITRAHYEWRLAHYQDTGDCQALHDLAMELSTPSGTELWQRLSPLDAALLRGLALAAAGDDATEAILSALDLATSERIVTP FQQAGEPLRRILNQLLSRQRLPPFGEYLLSLLDDYEPSPIAVLSTPSSDALPEPLSQREIEVLRLMAEGRSNQEIAGHLI IAISTVKSHVNNIFSKLGVASRTQAVARGRRLGLIP >Mature_916_residues MMPLVRTKLQPPEVRPSLLPRPRLYEQLRLALHSRLVLIAAPAGYGKTSLLAEWIVEARKEWSHIAWLSLDETDNDIRRL LAYLLEALSNLPHERRAQLQALLSEDSEIDTTQWCAELLNDLAETAGPTVIVLDDYHLINDPLIHNAITFLIDHLPPRCR LLIASRRDPPLPLARWRARGHLTELRSFDLAFNPEETAAFLLETMELPLSRDQIVALLESTEGWPAGLRLIALAIRDRVN RGELIDELISGNRYVADYLIEDVFNHLSHQLQQFLLQTSILDQLCGALCDAVIGVHDETEVRTPVQSSQQILTELERNNL FLFPLGSERVWYRYHHLFAEVLRDRLMASHSPDQVAILHRRAGAWYAAHGMLTQAVNHALQAQAFDDVVAMLEPIGLAVI SQVGEVTLRRWLPSLPVEAFERHPRLALLRAWLATADYQVDEAAHWIAVAERALAGVASGAATPIGPIANLRGELSAVRV RLAALQGDTDQVIAEGKQALNWLQSDYQSLRMRIAKDLGYACIAQRDLVRAEQSFSEAMVNGFHVGLPYISAMATIDYAY TLMLRGAYTNAINACRDTIDQMMHHQRNRTVPGIGLPFLALADLHTIRHEFAGALPALAEAESAIKSGHTTSYLCLLIVM ARVARARNDLPGALRIIRQARFMARQRRVGWVRAVLDGLESQIMIEQGDLEAAGQLITNIVATPSEFQYLPTAAFYAREH ITRAHYEWRLAHYQDTGDCQALHDLAMELSTPSGTELWQRLSPLDAALLRGLALAAAGDDATEAILSALDLATSERIVTP FQQAGEPLRRILNQLLSRQRLPPFGEYLLSLLDDYEPSPIAVLSTPSSDALPEPLSQREIEVLRLMAEGRSNQEIAGHLI IAISTVKSHVNNIFSKLGVASRTQAVARGRRLGLIP
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=662, Percent_Identity=27.3413897280967, Blast_Score=200, Evalue=4e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 102147; Mature: 102147
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPLVRTKLQPPEVRPSLLPRPRLYEQLRLALHSRLVLIAAPAGYGKTSLLAEWIVEARK CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHH EWSHIAWLSLDETDNDIRRLLAYLLEALSNLPHERRAQLQALLSEDSEIDTTQWCAELLN HHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH DLAETAGPTVIVLDDYHLINDPLIHNAITFLIDHLPPRCRLLIASRRDPPLPLARWRARG HHHHHCCCEEEEEECCHHHCCHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHH HLTELRSFDLAFNPEETAAFLLETMELPLSRDQIVALLESTEGWPAGLRLIALAIRDRVN HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC RGELIDELISGNRYVADYLIEDVFNHLSHQLQQFLLQTSILDQLCGALCDAVIGVHDETE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH VRTPVQSSQQILTELERNNLFLFPLGSERVWYRYHHLFAEVLRDRLMASHSPDQVAILHR HCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHH RAGAWYAAHGMLTQAVNHALQAQAFDDVVAMLEPIGLAVISQVGEVTLRRWLPSLPVEAF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ERHPRLALLRAWLATADYQVDEAAHWIAVAERALAGVASGAATPIGPIANLRGELSAVRV HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RLAALQGDTDQVIAEGKQALNWLQSDYQSLRMRIAKDLGYACIAQRDLVRAEQSFSEAMV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NGFHVGLPYISAMATIDYAYTLMLRGAYTNAINACRDTIDQMMHHQRNRTVPGIGLPFLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LADLHTIRHEFAGALPALAEAESAIKSGHTTSYLCLLIVMARVARARNDLPGALRIIRQA HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RFMARQRRVGWVRAVLDGLESQIMIEQGDLEAAGQLITNIVATPSEFQYLPTAAFYAREH HHHHHHHHHHHHHHHHHCCHHEEEEECCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH ITRAHYEWRLAHYQDTGDCQALHDLAMELSTPSGTELWQRLSPLDAALLRGLALAAAGDD HHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCH ATEAILSALDLATSERIVTPFQQAGEPLRRILNQLLSRQRLPPFGEYLLSLLDDYEPSPI HHHHHHHHHHHHHCCHHCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCE AVLSTPSSDALPEPLSQREIEVLRLMAEGRSNQEIAGHLIIAISTVKSHVNNIFSKLGVA EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH SRTQAVARGRRLGLIP HHHHHHHCCCCCCCCC >Mature Secondary Structure MMPLVRTKLQPPEVRPSLLPRPRLYEQLRLALHSRLVLIAAPAGYGKTSLLAEWIVEARK CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHH EWSHIAWLSLDETDNDIRRLLAYLLEALSNLPHERRAQLQALLSEDSEIDTTQWCAELLN HHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH DLAETAGPTVIVLDDYHLINDPLIHNAITFLIDHLPPRCRLLIASRRDPPLPLARWRARG HHHHHCCCEEEEEECCHHHCCHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHH HLTELRSFDLAFNPEETAAFLLETMELPLSRDQIVALLESTEGWPAGLRLIALAIRDRVN HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC RGELIDELISGNRYVADYLIEDVFNHLSHQLQQFLLQTSILDQLCGALCDAVIGVHDETE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH VRTPVQSSQQILTELERNNLFLFPLGSERVWYRYHHLFAEVLRDRLMASHSPDQVAILHR HCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHH RAGAWYAAHGMLTQAVNHALQAQAFDDVVAMLEPIGLAVISQVGEVTLRRWLPSLPVEAF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ERHPRLALLRAWLATADYQVDEAAHWIAVAERALAGVASGAATPIGPIANLRGELSAVRV HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RLAALQGDTDQVIAEGKQALNWLQSDYQSLRMRIAKDLGYACIAQRDLVRAEQSFSEAMV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NGFHVGLPYISAMATIDYAYTLMLRGAYTNAINACRDTIDQMMHHQRNRTVPGIGLPFLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LADLHTIRHEFAGALPALAEAESAIKSGHTTSYLCLLIVMARVARARNDLPGALRIIRQA HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RFMARQRRVGWVRAVLDGLESQIMIEQGDLEAAGQLITNIVATPSEFQYLPTAAFYAREH HHHHHHHHHHHHHHHHHCCHHEEEEECCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH ITRAHYEWRLAHYQDTGDCQALHDLAMELSTPSGTELWQRLSPLDAALLRGLALAAAGDD HHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCH ATEAILSALDLATSERIVTPFQQAGEPLRRILNQLLSRQRLPPFGEYLLSLLDDYEPSPI HHHHHHHHHHHHHCCHHCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCE AVLSTPSSDALPEPLSQREIEVLRLMAEGRSNQEIAGHLIIAISTVKSHVNNIFSKLGVA EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH SRTQAVARGRRLGLIP HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA