Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222525332

Identifier: 222525332

GI number: 222525332

Start: 2637929

End: 2638678

Strand: Reverse

Name: 222525332

Synonym: Chy400_2075

Alternate gene names: NA

Gene position: 2638678-2637929 (Counterclockwise)

Preceding gene: 222525334

Following gene: 222525331

Centisome position: 50.08

GC content: 52.4

Gene sequence:

>750_bases
ATGAAACAGTGTCAGGTTCCGTGCCCGTTCATCGCATTACACAGCCAGGATATGGCAAGTATTCGTAAACACTTGCTTGA
AGGTCACCAGTGTCGTGATGCCTGGGTAGCCTTGAGCAAGCTGGTACAAGATGCACGCCAGCGCAAAGATTGTCTGGAAC
GGGCATCAATTCTGGCGCCTGATGATGAGGAGCTACAGATTGCGTATCTGGAAGCACGACTGGCTGTTGATCCTGCTGAC
ATGTTTGCCCAGCAACGGCTGAACGAAATCCGCACGATGCGATTACTTTCCGACGTAAAGACGCCCTATTTCCACGAACC
ACCGAAGCCACGGTTAATCGGCGACATTCTCATCTCGATAGGAGCCATTACCGAAGCGGAACTAAATGAAGTGCTGGCCG
AGCAACGTCGTGGTAGTCTGCTGGTATCGGATCGACGGATCGGGCAACTACTTTTACGGCGTGGCATGATCACACCTGCC
AAACTCGCCAAAGCCTTGATCATTCAGCAGCAAGAGCGGAGTCGGGCACGCACAGCACCCCAGGTGTTAGGCGAATATCT
GGTTGAAAAGGGATATATCACTGCTGCCCAACTGGAAGCAGTGCTCACCGAACAGATTCGCCTGGATCAGCAAGGAAAGC
GCTATAGCCTGGGTCAGCTTCTGGTTCGCATGCATCTAATGTCGAAAGAAGCGGTTGAGAAAGCGGCCCGGGAGTACGAG
CAAATCTTCTGGCAGCAATTTAACACGTAG

Upstream 100 bases:

>100_bases
TGACTTGAGCGTGTATAATATAAAGTCACACACAGCAGTTAAGCAAATCAAGATTTGCGTCGCAGCACCTATGCAAAGGG
TATACGACAGGGTCTACCAA

Downstream 100 bases:

>100_bases
TTTAATATCCTGAATGCAGAGCCTTTCAAGCATTCCGCGATACAGCGTGGGCTGACAGGCAACTTGCTTACCCGTTCGGT
GCTACAGTGAGCAGCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKQCQVPCPFIALHSQDMASIRKHLLEGHQCRDAWVALSKLVQDARQRKDCLERASILAPDDEELQIAYLEARLAVDPAD
MFAQQRLNEIRTMRLLSDVKTPYFHEPPKPRLIGDILISIGAITEAELNEVLAEQRRGSLLVSDRRIGQLLLRRGMITPA
KLAKALIIQQQERSRARTAPQVLGEYLVEKGYITAAQLEAVLTEQIRLDQQGKRYSLGQLLVRMHLMSKEAVEKAAREYE
QIFWQQFNT

Sequences:

>Translated_249_residues
MKQCQVPCPFIALHSQDMASIRKHLLEGHQCRDAWVALSKLVQDARQRKDCLERASILAPDDEELQIAYLEARLAVDPAD
MFAQQRLNEIRTMRLLSDVKTPYFHEPPKPRLIGDILISIGAITEAELNEVLAEQRRGSLLVSDRRIGQLLLRRGMITPA
KLAKALIIQQQERSRARTAPQVLGEYLVEKGYITAAQLEAVLTEQIRLDQQGKRYSLGQLLVRMHLMSKEAVEKAAREYE
QIFWQQFNT
>Mature_249_residues
MKQCQVPCPFIALHSQDMASIRKHLLEGHQCRDAWVALSKLVQDARQRKDCLERASILAPDDEELQIAYLEARLAVDPAD
MFAQQRLNEIRTMRLLSDVKTPYFHEPPKPRLIGDILISIGAITEAELNEVLAEQRRGSLLVSDRRIGQLLLRRGMITPA
KLAKALIIQQQERSRARTAPQVLGEYLVEKGYITAAQLEAVLTEQIRLDQQGKRYSLGQLLVRMHLMSKEAVEKAAREYE
QIFWQQFNT

Specific function: Unknown

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28510; Mature: 28510

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQCQVPCPFIALHSQDMASIRKHLLEGHQCRDAWVALSKLVQDARQRKDCLERASILAP
CCCCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DDEELQIAYLEARLAVDPADMFAQQRLNEIRTMRLLSDVKTPYFHEPPKPRLIGDILISI
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
GAITEAELNEVLAEQRRGSLLVSDRRIGQLLLRRGMITPAKLAKALIIQQQERSRARTAP
HCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
QVLGEYLVEKGYITAAQLEAVLTEQIRLDQQGKRYSLGQLLVRMHLMSKEAVEKAAREYE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QIFWQQFNT
HHHHHHCCC
>Mature Secondary Structure
MKQCQVPCPFIALHSQDMASIRKHLLEGHQCRDAWVALSKLVQDARQRKDCLERASILAP
CCCCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DDEELQIAYLEARLAVDPADMFAQQRLNEIRTMRLLSDVKTPYFHEPPKPRLIGDILISI
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
GAITEAELNEVLAEQRRGSLLVSDRRIGQLLLRRGMITPAKLAKALIIQQQERSRARTAP
HCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
QVLGEYLVEKGYITAAQLEAVLTEQIRLDQQGKRYSLGQLLVRMHLMSKEAVEKAAREYE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QIFWQQFNT
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA