| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525332
Identifier: 222525332
GI number: 222525332
Start: 2637929
End: 2638678
Strand: Reverse
Name: 222525332
Synonym: Chy400_2075
Alternate gene names: NA
Gene position: 2638678-2637929 (Counterclockwise)
Preceding gene: 222525334
Following gene: 222525331
Centisome position: 50.08
GC content: 52.4
Gene sequence:
>750_bases ATGAAACAGTGTCAGGTTCCGTGCCCGTTCATCGCATTACACAGCCAGGATATGGCAAGTATTCGTAAACACTTGCTTGA AGGTCACCAGTGTCGTGATGCCTGGGTAGCCTTGAGCAAGCTGGTACAAGATGCACGCCAGCGCAAAGATTGTCTGGAAC GGGCATCAATTCTGGCGCCTGATGATGAGGAGCTACAGATTGCGTATCTGGAAGCACGACTGGCTGTTGATCCTGCTGAC ATGTTTGCCCAGCAACGGCTGAACGAAATCCGCACGATGCGATTACTTTCCGACGTAAAGACGCCCTATTTCCACGAACC ACCGAAGCCACGGTTAATCGGCGACATTCTCATCTCGATAGGAGCCATTACCGAAGCGGAACTAAATGAAGTGCTGGCCG AGCAACGTCGTGGTAGTCTGCTGGTATCGGATCGACGGATCGGGCAACTACTTTTACGGCGTGGCATGATCACACCTGCC AAACTCGCCAAAGCCTTGATCATTCAGCAGCAAGAGCGGAGTCGGGCACGCACAGCACCCCAGGTGTTAGGCGAATATCT GGTTGAAAAGGGATATATCACTGCTGCCCAACTGGAAGCAGTGCTCACCGAACAGATTCGCCTGGATCAGCAAGGAAAGC GCTATAGCCTGGGTCAGCTTCTGGTTCGCATGCATCTAATGTCGAAAGAAGCGGTTGAGAAAGCGGCCCGGGAGTACGAG CAAATCTTCTGGCAGCAATTTAACACGTAG
Upstream 100 bases:
>100_bases TGACTTGAGCGTGTATAATATAAAGTCACACACAGCAGTTAAGCAAATCAAGATTTGCGTCGCAGCACCTATGCAAAGGG TATACGACAGGGTCTACCAA
Downstream 100 bases:
>100_bases TTTAATATCCTGAATGCAGAGCCTTTCAAGCATTCCGCGATACAGCGTGGGCTGACAGGCAACTTGCTTACCCGTTCGGT GCTACAGTGAGCAGCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKQCQVPCPFIALHSQDMASIRKHLLEGHQCRDAWVALSKLVQDARQRKDCLERASILAPDDEELQIAYLEARLAVDPAD MFAQQRLNEIRTMRLLSDVKTPYFHEPPKPRLIGDILISIGAITEAELNEVLAEQRRGSLLVSDRRIGQLLLRRGMITPA KLAKALIIQQQERSRARTAPQVLGEYLVEKGYITAAQLEAVLTEQIRLDQQGKRYSLGQLLVRMHLMSKEAVEKAAREYE QIFWQQFNT
Sequences:
>Translated_249_residues MKQCQVPCPFIALHSQDMASIRKHLLEGHQCRDAWVALSKLVQDARQRKDCLERASILAPDDEELQIAYLEARLAVDPAD MFAQQRLNEIRTMRLLSDVKTPYFHEPPKPRLIGDILISIGAITEAELNEVLAEQRRGSLLVSDRRIGQLLLRRGMITPA KLAKALIIQQQERSRARTAPQVLGEYLVEKGYITAAQLEAVLTEQIRLDQQGKRYSLGQLLVRMHLMSKEAVEKAAREYE QIFWQQFNT >Mature_249_residues MKQCQVPCPFIALHSQDMASIRKHLLEGHQCRDAWVALSKLVQDARQRKDCLERASILAPDDEELQIAYLEARLAVDPAD MFAQQRLNEIRTMRLLSDVKTPYFHEPPKPRLIGDILISIGAITEAELNEVLAEQRRGSLLVSDRRIGQLLLRRGMITPA KLAKALIIQQQERSRARTAPQVLGEYLVEKGYITAAQLEAVLTEQIRLDQQGKRYSLGQLLVRMHLMSKEAVEKAAREYE QIFWQQFNT
Specific function: Unknown
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28510; Mature: 28510
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQCQVPCPFIALHSQDMASIRKHLLEGHQCRDAWVALSKLVQDARQRKDCLERASILAP CCCCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDEELQIAYLEARLAVDPADMFAQQRLNEIRTMRLLSDVKTPYFHEPPKPRLIGDILISI CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH GAITEAELNEVLAEQRRGSLLVSDRRIGQLLLRRGMITPAKLAKALIIQQQERSRARTAP HCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH QVLGEYLVEKGYITAAQLEAVLTEQIRLDQQGKRYSLGQLLVRMHLMSKEAVEKAAREYE HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QIFWQQFNT HHHHHHCCC >Mature Secondary Structure MKQCQVPCPFIALHSQDMASIRKHLLEGHQCRDAWVALSKLVQDARQRKDCLERASILAP CCCCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDEELQIAYLEARLAVDPADMFAQQRLNEIRTMRLLSDVKTPYFHEPPKPRLIGDILISI CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH GAITEAELNEVLAEQRRGSLLVSDRRIGQLLLRRGMITPAKLAKALIIQQQERSRARTAP HCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH QVLGEYLVEKGYITAAQLEAVLTEQIRLDQQGKRYSLGQLLVRMHLMSKEAVEKAAREYE HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QIFWQQFNT HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA