| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222525219
Identifier: 222525219
GI number: 222525219
Start: 2487655
End: 2488797
Strand: Direct
Name: 222525219
Synonym: Chy400_1959
Alternate gene names: NA
Gene position: 2487655-2488797 (Clockwise)
Preceding gene: 222525218
Following gene: 222525220
Centisome position: 47.21
GC content: 54.86
Gene sequence:
>1143_bases ATGAAGATACAGGTTGCTCCTGCGTTATTACGTTGGGCCTGTGAGCGAGCAGGTTTTCGTGAGGAAGATCTGAAAGGAAA ATTTCCCAGGCTCGACCGCTGGCTCAACGAAGAAGATCAGCCGACACTCAAGCAGTTGGAGCGTTTCGCTCAGGCCACGC ATACGCCCATTGGGTTTTTCTTCCTATCGGAACCTCCAACAGAGGCGATCCCGATCCCGGATCTTCGAACTGTTGGAAAC ATCCGTGTCAGCCGCCCAACGCCTGATCTTCTGGACACCATCTACCTCTGTCAGCAACGGCAGGAGTGGTACCGCGAATT TGCCCTGATCGCAGGCGAACCTCCGCTGTCGTTCGTTGGTTCAGTCCGAGTTACCGACGATGTTGTCGCCACAGCAGAAC GTGTTCGGCAAGCCCTGGGCTTCGATCTTGAAGAGCGTAGACAGCTCTCCTCCTGGACAGATGCCCTGCGGCGATTCATC GAGCAGGCAGACGCTCTCGGCGTACTCGTTATGGTGAATGGCGTCGTTGGCAGCAATAATCGCCGCAAGCTAAACCCTGC GGAGTTTCGCGGCTTCGCACTCTCAGATCCTCTTGCCCCTTTGATTTTCATCAACGGCGCCGATAGCAAAGCCGCTCAGA TGTTTACGCTGGCCCACGAACTCGCCCACCTGTGGCTCGGCCAATCCGCTTTGTCCGATGTAGGACCGACAACTACACCA GAAAACGACGTAGAATGGTGGTGCAATGCGGTTGCCGCTGAGTTGCTCGTGCCGCTTGCCGCACTCCGGTCGGAACTGTA TTCACGGGAAGAACTGCGTCACACACTTGATCGCCTTTCCCGGCAATTCAAAGTGAGCACCCTGGTGATCTTGCGGCGGC TGTATGACGTGGAATATCTCACGAGAGAGCAGCTTTGGGCGGAGTACGAAGTAGAGGTGGATCGTCTCAGCCGGATTTCC GCTGCGAGCGGCGGCAATTTTTATTCGACAACTGCTGCACGGGTCAGCAAGCGCTTTGCTCGCGCGGTAGCGATTTCTGT CTGGGAGGGACGTACCTCTTTTAGCGAAGCTAGCCGATTGCTTGGTTTCAAAAATATGTCTACCTTTCGTGAATTTAGCA TACAACTGGGAATAGTTGCGTAA
Upstream 100 bases:
>100_bases GGCTTGTTGCCCAGCTCCGTGAGCAACAGGCTGAGGCGGCGAAACTCGATGAGGCGATTGTTGCCAATCTGCAAGAACTG GGCTTTTGGGAGCAGAAGAG
Downstream 100 bases:
>100_bases TGGCCTACCTGCTCGATGCCAATGTCTTCATCTCAGCAAAGAACCTGCACTACGGACTGGATTTTTGTCCAGCATTCTGG GATTGGCTTGTTCGTGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKIQVAPALLRWACERAGFREEDLKGKFPRLDRWLNEEDQPTLKQLERFAQATHTPIGFFFLSEPPTEAIPIPDLRTVGN IRVSRPTPDLLDTIYLCQQRQEWYREFALIAGEPPLSFVGSVRVTDDVVATAERVRQALGFDLEERRQLSSWTDALRRFI EQADALGVLVMVNGVVGSNNRRKLNPAEFRGFALSDPLAPLIFINGADSKAAQMFTLAHELAHLWLGQSALSDVGPTTTP ENDVEWWCNAVAAELLVPLAALRSELYSREELRHTLDRLSRQFKVSTLVILRRLYDVEYLTREQLWAEYEVEVDRLSRIS AASGGNFYSTTAARVSKRFARAVAISVWEGRTSFSEASRLLGFKNMSTFREFSIQLGIVA
Sequences:
>Translated_380_residues MKIQVAPALLRWACERAGFREEDLKGKFPRLDRWLNEEDQPTLKQLERFAQATHTPIGFFFLSEPPTEAIPIPDLRTVGN IRVSRPTPDLLDTIYLCQQRQEWYREFALIAGEPPLSFVGSVRVTDDVVATAERVRQALGFDLEERRQLSSWTDALRRFI EQADALGVLVMVNGVVGSNNRRKLNPAEFRGFALSDPLAPLIFINGADSKAAQMFTLAHELAHLWLGQSALSDVGPTTTP ENDVEWWCNAVAAELLVPLAALRSELYSREELRHTLDRLSRQFKVSTLVILRRLYDVEYLTREQLWAEYEVEVDRLSRIS AASGGNFYSTTAARVSKRFARAVAISVWEGRTSFSEASRLLGFKNMSTFREFSIQLGIVA >Mature_380_residues MKIQVAPALLRWACERAGFREEDLKGKFPRLDRWLNEEDQPTLKQLERFAQATHTPIGFFFLSEPPTEAIPIPDLRTVGN IRVSRPTPDLLDTIYLCQQRQEWYREFALIAGEPPLSFVGSVRVTDDVVATAERVRQALGFDLEERRQLSSWTDALRRFI EQADALGVLVMVNGVVGSNNRRKLNPAEFRGFALSDPLAPLIFINGADSKAAQMFTLAHELAHLWLGQSALSDVGPTTTP ENDVEWWCNAVAAELLVPLAALRSELYSREELRHTLDRLSRQFKVSTLVILRRLYDVEYLTREQLWAEYEVEVDRLSRIS AASGGNFYSTTAARVSKRFARAVAISVWEGRTSFSEASRLLGFKNMSTFREFSIQLGIVA
Specific function: Unknown
COG id: COG2856
COG function: function code E; Predicted Zn peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43065; Mature: 43065
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQVAPALLRWACERAGFREEDLKGKFPRLDRWLNEEDQPTLKQLERFAQATHTPIGFF CCEEHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE FLSEPPTEAIPIPDLRTVGNIRVSRPTPDLLDTIYLCQQRQEWYREFALIAGEPPLSFVG EECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC SVRVTDDVVATAERVRQALGFDLEERRQLSSWTDALRRFIEQADALGVLVMVNGVVGSNN CCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECEECCCC RRKLNPAEFRGFALSDPLAPLIFINGADSKAAQMFTLAHELAHLWLGQSALSDVGPTTTP CCCCCHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC ENDVEWWCNAVAAELLVPLAALRSELYSREELRHTLDRLSRQFKVSTLVILRRLYDVEYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TREQLWAEYEVEVDRLSRISAASGGNFYSTTAARVSKRFARAVAISVWEGRTSFSEASRL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LGFKNMSTFREFSIQLGIVA HHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MKIQVAPALLRWACERAGFREEDLKGKFPRLDRWLNEEDQPTLKQLERFAQATHTPIGFF CCEEHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE FLSEPPTEAIPIPDLRTVGNIRVSRPTPDLLDTIYLCQQRQEWYREFALIAGEPPLSFVG EECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC SVRVTDDVVATAERVRQALGFDLEERRQLSSWTDALRRFIEQADALGVLVMVNGVVGSNN CCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECEECCCC RRKLNPAEFRGFALSDPLAPLIFINGADSKAAQMFTLAHELAHLWLGQSALSDVGPTTTP CCCCCHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC ENDVEWWCNAVAAELLVPLAALRSELYSREELRHTLDRLSRQFKVSTLVILRRLYDVEYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TREQLWAEYEVEVDRLSRISAASGGNFYSTTAARVSKRFARAVAISVWEGRTSFSEASRL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LGFKNMSTFREFSIQLGIVA HHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA