| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is muT4 [H]
Identifier: 222524924
GI number: 222524924
Start: 2088167
End: 2088607
Strand: Direct
Name: muT4 [H]
Synonym: Chy400_1658
Alternate gene names: 222524924
Gene position: 2088167-2088607 (Clockwise)
Preceding gene: 222524923
Following gene: 222524925
Centisome position: 39.63
GC content: 56.01
Gene sequence:
>441_bases ATGACCAGTAGCCCCATTCGTGCCGCCGGTTGTGTTGTGCTGGCCCGTGACCCAACGGGCCGGCTTCTTGTCTTATTGAT CCAGGATCGGCGAGGGATATGGACACTCCCAAAGGGCCATGTTGATGAAGGGGAGAGTGACGAAGAGGCCGCAGTACGTG AAGTAGCTGAAGAGACCGGGATTCACTGCACGATTGCTGAACGGCTCGAACGGATTACCTATCCTATCTATCACCGTGGT CGCTGGCAAGACAAACAGGTCACCTTTTTTCTCGCCAGTGCTGCACCTGAACCACCGACACCTGCCGTTGACGAAGGAAT TCGTACCGCAGCCTGGGTGCCCCTTGACGAAGCTCCGCCCAAAATCATCTACCGCCAGATTCGCAATCTGCTCCAGCGTG TTGCGCGCCGGCTTGGTCCGAACAAATCCAATTCACAATAG
Upstream 100 bases:
>100_bases CTCGAATGGATTTCGCAGCAAGCCAACGCCACCCCAATGGCACAGTGGTGGGTCGAGATTGAAGCTGCCATTGGCCGCCT GTTTGGGCTTTGAGGATTGT
Downstream 100 bases:
>100_bases GCCCCAATCGCAACTTTTCGCCGCGTAATCTCTTCGCATAGACCAGATAGACGTGCTATAATGCACCATACAGCGCACCG ATGTGTGCGTATTTTCGAGC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTSSPIRAAGCVVLARDPTGRLLVLLIQDRRGIWTLPKGHVDEGESDEEAAVREVAEETGIHCTIAERLERITYPIYHRG RWQDKQVTFFLASAAPEPPTPAVDEGIRTAAWVPLDEAPPKIIYRQIRNLLQRVARRLGPNKSNSQ
Sequences:
>Translated_146_residues MTSSPIRAAGCVVLARDPTGRLLVLLIQDRRGIWTLPKGHVDEGESDEEAAVREVAEETGIHCTIAERLERITYPIYHRG RWQDKQVTFFLASAAPEPPTPAVDEGIRTAAWVPLDEAPPKIIYRQIRNLLQRVARRLGPNKSNSQ >Mature_145_residues TSSPIRAAGCVVLARDPTGRLLVLLIQDRRGIWTLPKGHVDEGESDEEAAVREVAEETGIHCTIAERLERITYPIYHRGR WQDKQVTFFLASAAPEPPTPAVDEGIRTAAWVPLDEAPPKIIYRQIRNLLQRVARRLGPNKSNSQ
Specific function: May be involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine, 8-oxo-dGTP) from DNA and the nucleotide pool. In vitro has dATPase rather than 8-oxo-dGTPase activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: NA
Molecular weight: Translated: 16359; Mature: 16228
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSPIRAAGCVVLARDPTGRLLVLLIQDRRGIWTLPKGHVDEGESDEEAAVREVAEETG CCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHC IHCTIAERLERITYPIYHRGRWQDKQVTFFLASAAPEPPTPAVDEGIRTAAWVPLDEAPP CEEEHHHHHHHHCCCHHCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCEEEECCCCCCCH KIIYRQIRNLLQRVARRLGPNKSNSQ HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TSSPIRAAGCVVLARDPTGRLLVLLIQDRRGIWTLPKGHVDEGESDEEAAVREVAEETG CCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHC IHCTIAERLERITYPIYHRGRWQDKQVTFFLASAAPEPPTPAVDEGIRTAAWVPLDEAPP CEEEHHHHHHHHCCCHHCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCEEEECCCCCCCH KIIYRQIRNLLQRVARRLGPNKSNSQ HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]