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The map label for this gene is ccdA [H]

Identifier: 222524923

GI number: 222524923

Start: 2087236

End: 2088159

Strand: Direct

Name: ccdA [H]

Synonym: Chy400_1657

Alternate gene names: 222524923

Gene position: 2087236-2088159 (Clockwise)

Preceding gene: 222524922

Following gene: 222524924

Centisome position: 39.61

GC content: 57.58

Gene sequence:

>924_bases
ATGAAATCACAACCGATAGAATCAACACCGCGTCGCATAGGCAAGCGCAGTGTCGTAGCCATAGCGATGATCGGCATTCT
GGCTCTTCTGATCTTCTTTGCACTGAGCTTAGACCCTGGCGAGCAGGCCCGGTTTCTTACCGGTGGCGGGAGTGTGCTGG
TACTGGCCCTACCGGCATTCATCGCCGGAGTACTCAGCTTTCTTTCACCCTGCACGCTTCCCATTTTACCGGCCTACTTT
GCCTTCACCTTTCAGGCCAGCGGGCAAGGTAAAGCACGCATCGCGATGATGGGCATCGCATTTTTCCTTGGTCTGGCAAC
GACCATGACCCTGCTGGGGGCAAGCGCCACTGCGCTCAGCGGTCTGCTCTTTGCCAACCGCAGTGCACTTACCTTTTGGG
GCGGGCTAATCATCATTGGCTTTGGGATCATGGGCATGCTTGGCAAGGGATTTGCCGGGCCTCAACTGCAAGAACGTCCG
GCAGCCACCTTTGCCGGATCCTACATCTACGGAGCCACCTTTGCGCTGGGCTGGACGGCCTGTGTTGGTCCGATTCTGGG
TGCGCTCTTAACCCTCCTGGCGGCAACCAGTGATGTTGCCATCATTCAGGGCGCAGTCCTGGCCTTCATTTATTCGCTTG
GGCTAGGTCTACCTCTCATCCTGATCGCGACCTTCTTTCACCGACTAGGCACCGGATCGCGGGTGTGGCGTCTCTTGCGT
GGACGCGGCTTTACCGTCCACCTCTTTGGTCGTGAACTGTTTCTGCATTCGACCAGCCTGGCCAGCGGTGCCTTAATGGT
TGTGATGGGGATCTTGCTGGCCACCGGTCGGCTCGAATGGATTTCGCAGCAAGCCAACGCCACCCCAATGGCACAGTGGT
GGGTCGAGATTGAAGCTGCCATTGGCCGCCTGTTTGGGCTTTGA

Upstream 100 bases:

>100_bases
TTTTTATGGGGGCAACCCCGGTAAGCGAGGAAGAAGCCGCGCGCATCCGCCGCACCGCTCCCCGTTTACCGACAATCTCA
CCATCACCGGCGAGGGCTGC

Downstream 100 bases:

>100_bases
GGATTGTATGACCAGTAGCCCCATTCGTGCCGCCGGTTGTGTTGTGCTGGCCCGTGACCCAACGGGCCGGCTTCTTGTCT
TATTGATCCAGGATCGGCGA

Product: cytochrome c biogenesis protein transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKSQPIESTPRRIGKRSVVAIAMIGILALLIFFALSLDPGEQARFLTGGGSVLVLALPAFIAGVLSFLSPCTLPILPAYF
AFTFQASGQGKARIAMMGIAFFLGLATTMTLLGASATALSGLLFANRSALTFWGGLIIIGFGIMGMLGKGFAGPQLQERP
AATFAGSYIYGATFALGWTACVGPILGALLTLLAATSDVAIIQGAVLAFIYSLGLGLPLILIATFFHRLGTGSRVWRLLR
GRGFTVHLFGRELFLHSTSLASGALMVVMGILLATGRLEWISQQANATPMAQWWVEIEAAIGRLFGL

Sequences:

>Translated_307_residues
MKSQPIESTPRRIGKRSVVAIAMIGILALLIFFALSLDPGEQARFLTGGGSVLVLALPAFIAGVLSFLSPCTLPILPAYF
AFTFQASGQGKARIAMMGIAFFLGLATTMTLLGASATALSGLLFANRSALTFWGGLIIIGFGIMGMLGKGFAGPQLQERP
AATFAGSYIYGATFALGWTACVGPILGALLTLLAATSDVAIIQGAVLAFIYSLGLGLPLILIATFFHRLGTGSRVWRLLR
GRGFTVHLFGRELFLHSTSLASGALMVVMGILLATGRLEWISQQANATPMAQWWVEIEAAIGRLFGL
>Mature_307_residues
MKSQPIESTPRRIGKRSVVAIAMIGILALLIFFALSLDPGEQARFLTGGGSVLVLALPAFIAGVLSFLSPCTLPILPAYF
AFTFQASGQGKARIAMMGIAFFLGLATTMTLLGASATALSGLLFANRSALTFWGGLIIIGFGIMGMLGKGFAGPQLQERP
AATFAGSYIYGATFALGWTACVGPILGALLTLLAATSDVAIIQGAVLAFIYSLGLGLPLILIATFFHRLGTGSRVWRLLR
GRGFTVHLFGRELFLHSTSLASGALMVVMGILLATGRLEWISQQANATPMAQWWVEIEAAIGRLFGL

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 32317; Mature: 32317

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQPIESTPRRIGKRSVVAIAMIGILALLIFFALSLDPGEQARFLTGGGSVLVLALPAF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHH
IAGVLSFLSPCTLPILPAYFAFTFQASGQGKARIAMMGIAFFLGLATTMTLLGASATALS
HHHHHHHHCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
GLLFANRSALTFWGGLIIIGFGIMGMLGKGFAGPQLQERPAATFAGSYIYGATFALGWTA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHCCCHHHHHHHHHHHHH
CVGPILGALLTLLAATSDVAIIQGAVLAFIYSLGLGLPLILIATFFHRLGTGSRVWRLLR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH
GRGFTVHLFGRELFLHSTSLASGALMVVMGILLATGRLEWISQQANATPMAQWWVEIEAA
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHH
IGRLFGL
HHHHHCC
>Mature Secondary Structure
MKSQPIESTPRRIGKRSVVAIAMIGILALLIFFALSLDPGEQARFLTGGGSVLVLALPAF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHH
IAGVLSFLSPCTLPILPAYFAFTFQASGQGKARIAMMGIAFFLGLATTMTLLGASATALS
HHHHHHHHCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
GLLFANRSALTFWGGLIIIGFGIMGMLGKGFAGPQLQERPAATFAGSYIYGATFALGWTA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHCCCHHHHHHHHHHHHH
CVGPILGALLTLLAATSDVAIIQGAVLAFIYSLGLGLPLILIATFFHRLGTGSRVWRLLR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH
GRGFTVHLFGRELFLHSTSLASGALMVVMGILLATGRLEWISQQANATPMAQWWVEIEAA
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHH
IGRLFGL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]