| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524569
Identifier: 222524569
GI number: 222524569
Start: 1656814
End: 1658172
Strand: Reverse
Name: 222524569
Synonym: Chy400_1293
Alternate gene names: NA
Gene position: 1658172-1656814 (Counterclockwise)
Preceding gene: 222524579
Following gene: 222524565
Centisome position: 31.47
GC content: 57.47
Gene sequence:
>1359_bases ATGACCTCTGCCAATTCGACAACCGTTCAGGCCACATCTGTGCAACCTACAGAGCAGTCTGGTTCATCGTTGCCGGGCAA TACATCATCACTCGTTCCTTCGGAAGTACGGCGCGGTTTACTCATTTCCATCTGGGAAGGTGCGATTGCCAATATTCATA TCAGCATTACAGGCGCTATCGGTGGGAGCGTCTTTCTCAGTGGATTTGCGCTGTTGCTCGGTGCCAATAATTTTCAACTC GGCTTGCTTGGTGCTTTGCCATTCATTGGCCAGATGTTTCAGTTCCTGAGTGCCTACCTGGAAGCCCGGTTTGCGAATCG ACGAGCCATTGTGCTCTTTTCGGCACTGGCGGGGCGGCTGGTTTGGGCGTTGTTGCTCTGCCTGCCGTTCACCGGCTGGC CGGCGACCTGGCAGCTTACCGTGTTTTTCGTGGCGCTGGGTTTCTCGTATGGGCTGAATGGCATGGCAGGCAATGCCTGG ATGAGTTGGATGAGCGATCTGGTTCCGCCTAACCGGCGTGGGAGCTATTTTGGCGTGCGGAATACGGTGGCCGGTATCAG CGCGATGGTGAGTGTCTATCTTGCCGGGTTGACCCTCGACCATTTTCGGGCGCAGGGTGCGGAAGCGCACGGGTATGCCC TGATCTTTGGGGTAGCGGTGCTGGCTGCTTTTGGGGCAGCCGTGCTGATTGCCCGCCAGCCAGAGCCGCCATTGCAGCCA CAACCGTGGCAGGGGGTTGGTTCGTTTCTGTTCGACCCGCTCCGCGATACGGCTTTTCGCCGTTTTACCGTGCTCGCGAC AGGTTGGGCGCTGGTTACCGGTATCGCCGCTCCCTTCTTTAATGCGTATGGCTTGACTACCCTGCAACTCGATTTCTCGC TGCTGGCACTGACCGGTATCGTGACCAGTGCCGTGGCGCTCTTTTTCTCGCCGCTTGTGGGATGGTTGATGGATCGCTAC GGCTATCGTGTGGTCGTGACGGCGTGTGTGATGGGGACGATTCCACTGCCGCTAGGTTGGATACTCTCAACACCAGACAA TATTCTCCCGCTCTGGCTAACGTCAATCTTTTCTGGCGTCTTCTGGCCGGGCGTGAATCAAGGGCTGGGCAATCTGCTGA TGGAACGCGCTCCTGCTGCCCAACGTGGGGTTGCAGTAGCAATCTTTAGTTTGCTTACCGGCCTGGGTACACTGATTGCA TCGTTGATCGGCGGTGCGTTAGGGCAGGTACTGACCGGGACTACGCTGATGCTGGGGCCATTGGCGGTTCACGGGCTGGC GGCATTGTTTGTGATCACGATGATTGGACGCATGGCCATGGTTGGTGCGTTTTGGCGCGTGCTGGCCGGCAATCGGTAG
Upstream 100 bases:
>100_bases CATACCGCACAACGCTACTCTGTGTGATGATACACGGTTTAGGTGATAATACTGCTGACCATCCTCAATCTTTACGCCAT TTTGTAACAAGGATCGCCCT
Downstream 100 bases:
>100_bases GCGTATTGAACAGAGAGTGTTTTGAGCTGTTGAAGGGGTATCTTGAATAGCAAGCAGTCCGTACCCCCTGAATAAAAATG TGAGCCTGCTGAAGCTCATG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Family Transporter; Twin-Arginine Translocation Pathway Signal; Permease Of Facilitator Superfamily
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MTSANSTTVQATSVQPTEQSGSSLPGNTSSLVPSEVRRGLLISIWEGAIANIHISITGAIGGSVFLSGFALLLGANNFQL GLLGALPFIGQMFQFLSAYLEARFANRRAIVLFSALAGRLVWALLLCLPFTGWPATWQLTVFFVALGFSYGLNGMAGNAW MSWMSDLVPPNRRGSYFGVRNTVAGISAMVSVYLAGLTLDHFRAQGAEAHGYALIFGVAVLAAFGAAVLIARQPEPPLQP QPWQGVGSFLFDPLRDTAFRRFTVLATGWALVTGIAAPFFNAYGLTTLQLDFSLLALTGIVTSAVALFFSPLVGWLMDRY GYRVVVTACVMGTIPLPLGWILSTPDNILPLWLTSIFSGVFWPGVNQGLGNLLMERAPAAQRGVAVAIFSLLTGLGTLIA SLIGGALGQVLTGTTLMLGPLAVHGLAALFVITMIGRMAMVGAFWRVLAGNR
Sequences:
>Translated_452_residues MTSANSTTVQATSVQPTEQSGSSLPGNTSSLVPSEVRRGLLISIWEGAIANIHISITGAIGGSVFLSGFALLLGANNFQL GLLGALPFIGQMFQFLSAYLEARFANRRAIVLFSALAGRLVWALLLCLPFTGWPATWQLTVFFVALGFSYGLNGMAGNAW MSWMSDLVPPNRRGSYFGVRNTVAGISAMVSVYLAGLTLDHFRAQGAEAHGYALIFGVAVLAAFGAAVLIARQPEPPLQP QPWQGVGSFLFDPLRDTAFRRFTVLATGWALVTGIAAPFFNAYGLTTLQLDFSLLALTGIVTSAVALFFSPLVGWLMDRY GYRVVVTACVMGTIPLPLGWILSTPDNILPLWLTSIFSGVFWPGVNQGLGNLLMERAPAAQRGVAVAIFSLLTGLGTLIA SLIGGALGQVLTGTTLMLGPLAVHGLAALFVITMIGRMAMVGAFWRVLAGNR >Mature_451_residues TSANSTTVQATSVQPTEQSGSSLPGNTSSLVPSEVRRGLLISIWEGAIANIHISITGAIGGSVFLSGFALLLGANNFQLG LLGALPFIGQMFQFLSAYLEARFANRRAIVLFSALAGRLVWALLLCLPFTGWPATWQLTVFFVALGFSYGLNGMAGNAWM SWMSDLVPPNRRGSYFGVRNTVAGISAMVSVYLAGLTLDHFRAQGAEAHGYALIFGVAVLAAFGAAVLIARQPEPPLQPQ PWQGVGSFLFDPLRDTAFRRFTVLATGWALVTGIAAPFFNAYGLTTLQLDFSLLALTGIVTSAVALFFSPLVGWLMDRYG YRVVVTACVMGTIPLPLGWILSTPDNILPLWLTSIFSGVFWPGVNQGLGNLLMERAPAAQRGVAVAIFSLLTGLGTLIAS LIGGALGQVLTGTTLMLGPLAVHGLAALFVITMIGRMAMVGAFWRVLAGNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47880; Mature: 47749
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSANSTTVQATSVQPTEQSGSSLPGNTSSLVPSEVRRGLLISIWEGAIANIHISITGAI CCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCHHHHHCCEEEEEECCCEEEEEEEEEECC GGSVFLSGFALLLGANNFQLGLLGALPFIGQMFQFLSAYLEARFANRRAIVLFSALAGRL CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VWALLLCLPFTGWPATWQLTVFFVALGFSYGLNGMAGNAWMSWMSDLVPPNRRGSYFGVR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH NTVAGISAMVSVYLAGLTLDHFRAQGAEAHGYALIFGVAVLAAFGAAVLIARQPEPPLQP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCC QPWQGVGSFLFDPLRDTAFRRFTVLATGWALVTGIAAPFFNAYGLTTLQLDFSLLALTGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH VTSAVALFFSPLVGWLMDRYGYRVVVTACVMGTIPLPLGWILSTPDNILPLWLTSIFSGV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHH FWPGVNQGLGNLLMERAPAAQRGVAVAIFSLLTGLGTLIASLIGGALGQVLTGTTLMLGP CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LAVHGLAALFVITMIGRMAMVGAFWRVLAGNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSANSTTVQATSVQPTEQSGSSLPGNTSSLVPSEVRRGLLISIWEGAIANIHISITGAI CCCCCCEEEEECCCCCHHCCCCCCCCCCCCCHHHHHCCEEEEEECCCEEEEEEEEEECC GGSVFLSGFALLLGANNFQLGLLGALPFIGQMFQFLSAYLEARFANRRAIVLFSALAGRL CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VWALLLCLPFTGWPATWQLTVFFVALGFSYGLNGMAGNAWMSWMSDLVPPNRRGSYFGVR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH NTVAGISAMVSVYLAGLTLDHFRAQGAEAHGYALIFGVAVLAAFGAAVLIARQPEPPLQP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCC QPWQGVGSFLFDPLRDTAFRRFTVLATGWALVTGIAAPFFNAYGLTTLQLDFSLLALTGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH VTSAVALFFSPLVGWLMDRYGYRVVVTACVMGTIPLPLGWILSTPDNILPLWLTSIFSGV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHH FWPGVNQGLGNLLMERAPAAQRGVAVAIFSLLTGLGTLIASLIGGALGQVLTGTTLMLGP CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LAVHGLAALFVITMIGRMAMVGAFWRVLAGNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA