| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524565
Identifier: 222524565
GI number: 222524565
Start: 1651527
End: 1652159
Strand: Reverse
Name: 222524565
Synonym: Chy400_1289
Alternate gene names: NA
Gene position: 1652159-1651527 (Counterclockwise)
Preceding gene: 222524569
Following gene: 222524564
Centisome position: 31.36
GC content: 59.24
Gene sequence:
>633_bases ATGAAAGTTGAGCGCAGAGCACAGGGCGCAACCCGGCGCAGCATTCTCCAGTTGTTACGCCGCCACGGTCAGATGAGCGC CATTGAGTTAAGCGATGCACTGGCAATTGGCGCGGTTGGTATTCGCCAGCACCTCACCGCTCTGGAGCAAGAGGGGCTGG TGTATGTCTGCGGTCTGCGCCGGAATGTCGGACGTCCGGCACACCTGTATGCGCTCACCGAACGGGCCGAGGCGTTCTTT CCCAAGCATTATGAGCGGCTCGTGTGTGAACTGATCGACAGTGTTGCGGCAGTCGGTGGCGAGCCGGCAGTCAGGGAGAT GCTGGAACAGCGGCGCAAAATGCTCTTCGCCCGCTTAGCCCCGCAACTGGCGGACAAGCCACGGGCAACACAGGTCGCGA TACTCGCCGAAGCGCTGGCCGAACAGGGGTATATGTGTGAGTGTGAACAGGGCGAGAAGGGTGATCTCTTCCTGACTCAG TATAACTGTCCGTTTGATTGCGTTGCCCGGCGCTATCCGCAAATCTGCGCCCAAGAGTTACGTCTTTACGAAGACCTGCT GGAGACCACTATCGAGCGTGATACCACGATTGCCGAAGGTGGTCACTGTTGCCGGTACCGGATTCCGGCCTAG
Upstream 100 bases:
>100_bases AAGCAGGTGTCATTATCTTGCTTGACAGTACGGAGTACGGTTGCTATACTCGCATTAAGACTATTCGATAGTAGCATACT CGTAAAGTGGTATATCGCCG
Downstream 100 bases:
>100_bases CACTTACTCGCACATCCGCGGTACAATACAGGTACGCCACAGATGACGGCCAGTGGTGGCCGTCGTTGTTTGCAATTGCT ACGGAGGTTTCACATGGCCT
Product: putative transcriptional regulator
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; Transcriptional Regulator TrmB; Transcriptional Regulatory Protein; Regulatory Protein ArsR; DeoR Family Transcriptional Regulator; HTH Domain Family; Transcriptional Regulator ArsR Family; Helix-Turn-Helix Type; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; ArsR Transcriptional Regulator; MarR Family Transcriptional Regulator; SufR Family Transcriptional Regulator; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator Protein; Transcriptional Regulator DeoR Family; Arsr Family Transcriptional Regulator; ArsR Family Regulator; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKVERRAQGATRRSILQLLRRHGQMSAIELSDALAIGAVGIRQHLTALEQEGLVYVCGLRRNVGRPAHLYALTERAEAFF PKHYERLVCELIDSVAAVGGEPAVREMLEQRRKMLFARLAPQLADKPRATQVAILAEALAEQGYMCECEQGEKGDLFLTQ YNCPFDCVARRYPQICAQELRLYEDLLETTIERDTTIAEGGHCCRYRIPA
Sequences:
>Translated_210_residues MKVERRAQGATRRSILQLLRRHGQMSAIELSDALAIGAVGIRQHLTALEQEGLVYVCGLRRNVGRPAHLYALTERAEAFF PKHYERLVCELIDSVAAVGGEPAVREMLEQRRKMLFARLAPQLADKPRATQVAILAEALAEQGYMCECEQGEKGDLFLTQ YNCPFDCVARRYPQICAQELRLYEDLLETTIERDTTIAEGGHCCRYRIPA >Mature_210_residues MKVERRAQGATRRSILQLLRRHGQMSAIELSDALAIGAVGIRQHLTALEQEGLVYVCGLRRNVGRPAHLYALTERAEAFF PKHYERLVCELIDSVAAVGGEPAVREMLEQRRKMLFARLAPQLADKPRATQVAILAEALAEQGYMCECEQGEKGDLFLTQ YNCPFDCVARRYPQICAQELRLYEDLLETTIERDTTIAEGGHCCRYRIPA
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23707; Mature: 23707
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVERRAQGATRRSILQLLRRHGQMSAIELSDALAIGAVGIRQHLTALEQEGLVYVCGLR CCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC RNVGRPAHLYALTERAEAFFPKHYERLVCELIDSVAAVGGEPAVREMLEQRRKMLFARLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH PQLADKPRATQVAILAEALAEQGYMCECEQGEKGDLFLTQYNCPFDCVARRYPQICAQEL HHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH RLYEDLLETTIERDTTIAEGGHCCRYRIPA HHHHHHHHHHHHCCCCCCCCCCEEEEECCC >Mature Secondary Structure MKVERRAQGATRRSILQLLRRHGQMSAIELSDALAIGAVGIRQHLTALEQEGLVYVCGLR CCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC RNVGRPAHLYALTERAEAFFPKHYERLVCELIDSVAAVGGEPAVREMLEQRRKMLFARLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH PQLADKPRATQVAILAEALAEQGYMCECEQGEKGDLFLTQYNCPFDCVARRYPQICAQEL HHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH RLYEDLLETTIERDTTIAEGGHCCRYRIPA HHHHHHHHHHHHCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA