| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524520
Identifier: 222524520
GI number: 222524520
Start: 1583056
End: 1583778
Strand: Direct
Name: 222524520
Synonym: Chy400_1244
Alternate gene names: NA
Gene position: 1583056-1583778 (Clockwise)
Preceding gene: 222524519
Following gene: 222524521
Centisome position: 30.04
GC content: 48.69
Gene sequence:
>723_bases ATGACGTCATCAACCCCTTCATGCCGACGTCGTCTCGTTGTCGGGATTGCCGGTGCCGTTTCGTTTTCGTTATTGATCTC ATTCATTGGGTTGGGCCTGTTCTTATTCCTTCAAGATCAGGCCATTCGGCGATCACGGCAACTTGAAAAGATACTGGAAA CAACGCTCGATCTCAAGGCAGACTTTCTGATAGCCCGCCAGTACGATTACGACCTGATTGAGCTGGCGCGTCACAATCAA CGCCTCGACTCGATAGTTGAGAGGAAACATTCAGCAGCCATCACTAATGTTGTAACAGGGTTGCATGAACTGGCGACGTT TGATGCAGATGTTCCTGAACTGGTATCCCATCGACAAGCGATGGCTCGTCTGCTGGAGCAATACCAGACGACAGTAAACC AGATCAAAGATCAGATCGAACAGCGTCAGCGTACTGACGGTATTGAACAGGAGCTGCGTGACGCACGGTACAAACTCTGG CAACACCTTGAGCGTAGTCCCGCCGACTTTCGAGAACTTGGTTTACGTCTCTCCTTAGACGAACAGGCATATCTCTCGAC CCGACGACAAGAGTATATCGATAATGTTCGACTTCAGATTAATAAACTCTACGCCATCGCATCCTCTTTGCCGGATACGG AACGAGTCGTGGTAGAACGAGATGTTGCTGACTATCTGGAAGATTTTTTACTGTTAGTCACACTTGATCGCGATTTGCAG TAA
Upstream 100 bases:
>100_bases ATCAACAGACTCTTGAGCAAAGAGGATTACTCTTTCGGCTAATTGATGTAGACCCTGCGGTACGTGAACTGTACCGTGCG GCGTGGATAGAGGTACGCCA
Downstream 100 bases:
>100_bases CACGCTAACACCTTACAGTATCAGACTGATGATCTCCTGCTGATCATCAGCGAACTTACGCGCATACTGAAATCTGAACA ACAACAAGTAAATGCCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MTSSTPSCRRRLVVGIAGAVSFSLLISFIGLGLFLFLQDQAIRRSRQLEKILETTLDLKADFLIARQYDYDLIELARHNQ RLDSIVERKHSAAITNVVTGLHELATFDADVPELVSHRQAMARLLEQYQTTVNQIKDQIEQRQRTDGIEQELRDARYKLW QHLERSPADFRELGLRLSLDEQAYLSTRRQEYIDNVRLQINKLYAIASSLPDTERVVVERDVADYLEDFLLLVTLDRDLQ
Sequences:
>Translated_240_residues MTSSTPSCRRRLVVGIAGAVSFSLLISFIGLGLFLFLQDQAIRRSRQLEKILETTLDLKADFLIARQYDYDLIELARHNQ RLDSIVERKHSAAITNVVTGLHELATFDADVPELVSHRQAMARLLEQYQTTVNQIKDQIEQRQRTDGIEQELRDARYKLW QHLERSPADFRELGLRLSLDEQAYLSTRRQEYIDNVRLQINKLYAIASSLPDTERVVVERDVADYLEDFLLLVTLDRDLQ >Mature_239_residues TSSTPSCRRRLVVGIAGAVSFSLLISFIGLGLFLFLQDQAIRRSRQLEKILETTLDLKADFLIARQYDYDLIELARHNQR LDSIVERKHSAAITNVVTGLHELATFDADVPELVSHRQAMARLLEQYQTTVNQIKDQIEQRQRTDGIEQELRDARYKLWQ HLERSPADFRELGLRLSLDEQAYLSTRRQEYIDNVRLQINKLYAIASSLPDTERVVVERDVADYLEDFLLLVTLDRDLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27845; Mature: 27714
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSTPSCRRRLVVGIAGAVSFSLLISFIGLGLFLFLQDQAIRRSRQLEKILETTLDLKA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFLIARQYDYDLIELARHNQRLDSIVERKHSAAITNVVTGLHELATFDADVPELVSHRQA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH MARLLEQYQTTVNQIKDQIEQRQRTDGIEQELRDARYKLWQHLERSPADFRELGLRLSLD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC EQAYLSTRRQEYIDNVRLQINKLYAIASSLPDTERVVVERDVADYLEDFLLLVTLDRDLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSSTPSCRRRLVVGIAGAVSFSLLISFIGLGLFLFLQDQAIRRSRQLEKILETTLDLKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFLIARQYDYDLIELARHNQRLDSIVERKHSAAITNVVTGLHELATFDADVPELVSHRQA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH MARLLEQYQTTVNQIKDQIEQRQRTDGIEQELRDARYKLWQHLERSPADFRELGLRLSLD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC EQAYLSTRRQEYIDNVRLQINKLYAIASSLPDTERVVVERDVADYLEDFLLLVTLDRDLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA