| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524515
Identifier: 222524515
GI number: 222524515
Start: 1574315
End: 1575991
Strand: Reverse
Name: 222524515
Synonym: Chy400_1239
Alternate gene names: NA
Gene position: 1575991-1574315 (Counterclockwise)
Preceding gene: 222524518
Following gene: 222524512
Centisome position: 29.91
GC content: 58.14
Gene sequence:
>1677_bases ATGCCCGCAATTGATTTCACGCGCTATTACCGTCCACACGAAGTTGAAGCCGCATTGAAAGCCTGGGCCGAAGAGTATCC TCACCTTTGTTCTCTGCGTAGCATCGGTACCAGCTACGAGGGACGTTCGATCTGGTTGCTGACGTTGACCAATCAGGCTA CCGGAGCCGATGACGAAAAACCGGCTTTCTGGCTTGATGCCAACATCCATGCGACCGAAGTGACCGGTTGTATGGGGGCG CTGCACGTTATTCAGACTGTGCTGACCGGCTACGGTCACGATCCTAACCTGACTGCTTTGCTCGATGAACGTGCATTGTA TATCGTGCCATGCCTCAACCCCGATGGCATGGAACAGGCGCTCACCTCACCGGTCTATGTGCGCTCAGGTACCCGGCGTT ACCCATTCACCGACGACCGGGACGGTCTCTACCCGGCTGATATTGATGGCGATGGTTTGATCTTGCAGATGCGCGTGGTC GATCCCGATGGGGGCTGGAAGGTGAGTGAGCGCGATCCGCGGCTGATGCGGCGGCGTGCTCCCGACGAGCGCGGTGGCAC GTACTACCGGGTCTATACCGAGGGATTGATTCGCAATTTTGATGGCTACGAGGTCAAGATTGCACCACCGGCCCAGGGGC TGGATTTTAATCGCAATTTTCCCTACATCTGGGCACCGGAAGGGGTACAGCGTGGTGCTGGCCCGTATCCAACCTCTGAG CCGGAGATTCGGGCGGCGGTTGAGTTTCTCACCTCCCATCTGAACGTTAGTGGGGCCATCTCATACCACACCTATTCCGG TGCTATTCTCCGCCCCTATTCCGATAAACCCGACGATCAGATGCCGATTGATGATCTCTGGACGTACAAAGAGCTGGGGA ATCGCGGCCAGGAGATCACCGGCTACAAACACGTCTCGGTTTATCACGGCTTTCGTTATCACCCGCGTGAAGTCATGCGC GGCGCTTTCGATGATTGGGCCTACGAACAGCTTGGCATCTTCGCCTTTACCGTCGAGTTGTGGGATATGATCGGCGAGGC CGGCATTAAGGATCGTGATTTCATCGAATGGTTCCGCGATCATCCCGAAGAGGACGATCTCAAGCTCTTGCGCTGGAATG ATGAACAGCTTGGCGGCGCCGGTTTTGTCAACTGGCGACCGTTCAATCATCCGCAGCTTGGCCCGGTCGAAATTGGGGGA TGGATCGAGCGCCGCACGTTTGGCAATCCGCCCGAACAATTTCTGCTACGAACGCTGGAACCCAATACACGCTTTGTCCT GGCCTTTGCTCAGACCGGCCCACGGCTCGAATTGCGCCACGTGCAGGCCGAAGCGCTAGGCGGTGATCTCTACCGCTTGC AGGCAGTCGTGGTCAACAGCGGCTATCTGCCGACGTATGGCAGCCGCAAGGCTTTAGAAGTAAAAGCAGTGCAGCCAATT GAGGTCGAAGTGTTGCTTCCTGAAGGCGGTGAGATCGTGAGCGGTGAACGGCGCCAGGAGATCGGCCAACTGGAAGGGCG GGCGAACAAGCGCGCGTTGTGGGGAGGGAGTTTCCCAACCGATCATCTGCGGCGCCTGACCTGGACGGTACGTGCACCGG CGGGCAGCAGCGTCTCGGTGGTTGCCCGTTCCCAGCGCGCCGGTACGGCCCGGGCAACGGTGCAGCTAGACGGTTAG
Upstream 100 bases:
>100_bases GCTGATTGTTAGAAGTATACCATATGCTTTCTGTTATGTATGACGGGCCATTTGTGGTATTATTATGACGAAGAATGTTT GACAAAGCAAGGATTGTCTT
Downstream 100 bases:
>100_bases TATCGCCTTAGAGAATAGGCGGCACTGCACGTGCGCGACTTCTGGGAGGGCGGAACATCTGCTTCCGCCCTCCCAGTATG TTGCTCCGTGCAGCTATGAG
Product: peptidase M14 carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MPAIDFTRYYRPHEVEAALKAWAEEYPHLCSLRSIGTSYEGRSIWLLTLTNQATGADDEKPAFWLDANIHATEVTGCMGA LHVIQTVLTGYGHDPNLTALLDERALYIVPCLNPDGMEQALTSPVYVRSGTRRYPFTDDRDGLYPADIDGDGLILQMRVV DPDGGWKVSERDPRLMRRRAPDERGGTYYRVYTEGLIRNFDGYEVKIAPPAQGLDFNRNFPYIWAPEGVQRGAGPYPTSE PEIRAAVEFLTSHLNVSGAISYHTYSGAILRPYSDKPDDQMPIDDLWTYKELGNRGQEITGYKHVSVYHGFRYHPREVMR GAFDDWAYEQLGIFAFTVELWDMIGEAGIKDRDFIEWFRDHPEEDDLKLLRWNDEQLGGAGFVNWRPFNHPQLGPVEIGG WIERRTFGNPPEQFLLRTLEPNTRFVLAFAQTGPRLELRHVQAEALGGDLYRLQAVVVNSGYLPTYGSRKALEVKAVQPI EVEVLLPEGGEIVSGERRQEIGQLEGRANKRALWGGSFPTDHLRRLTWTVRAPAGSSVSVVARSQRAGTARATVQLDG
Sequences:
>Translated_558_residues MPAIDFTRYYRPHEVEAALKAWAEEYPHLCSLRSIGTSYEGRSIWLLTLTNQATGADDEKPAFWLDANIHATEVTGCMGA LHVIQTVLTGYGHDPNLTALLDERALYIVPCLNPDGMEQALTSPVYVRSGTRRYPFTDDRDGLYPADIDGDGLILQMRVV DPDGGWKVSERDPRLMRRRAPDERGGTYYRVYTEGLIRNFDGYEVKIAPPAQGLDFNRNFPYIWAPEGVQRGAGPYPTSE PEIRAAVEFLTSHLNVSGAISYHTYSGAILRPYSDKPDDQMPIDDLWTYKELGNRGQEITGYKHVSVYHGFRYHPREVMR GAFDDWAYEQLGIFAFTVELWDMIGEAGIKDRDFIEWFRDHPEEDDLKLLRWNDEQLGGAGFVNWRPFNHPQLGPVEIGG WIERRTFGNPPEQFLLRTLEPNTRFVLAFAQTGPRLELRHVQAEALGGDLYRLQAVVVNSGYLPTYGSRKALEVKAVQPI EVEVLLPEGGEIVSGERRQEIGQLEGRANKRALWGGSFPTDHLRRLTWTVRAPAGSSVSVVARSQRAGTARATVQLDG >Mature_557_residues PAIDFTRYYRPHEVEAALKAWAEEYPHLCSLRSIGTSYEGRSIWLLTLTNQATGADDEKPAFWLDANIHATEVTGCMGAL HVIQTVLTGYGHDPNLTALLDERALYIVPCLNPDGMEQALTSPVYVRSGTRRYPFTDDRDGLYPADIDGDGLILQMRVVD PDGGWKVSERDPRLMRRRAPDERGGTYYRVYTEGLIRNFDGYEVKIAPPAQGLDFNRNFPYIWAPEGVQRGAGPYPTSEP EIRAAVEFLTSHLNVSGAISYHTYSGAILRPYSDKPDDQMPIDDLWTYKELGNRGQEITGYKHVSVYHGFRYHPREVMRG AFDDWAYEQLGIFAFTVELWDMIGEAGIKDRDFIEWFRDHPEEDDLKLLRWNDEQLGGAGFVNWRPFNHPQLGPVEIGGW IERRTFGNPPEQFLLRTLEPNTRFVLAFAQTGPRLELRHVQAEALGGDLYRLQAVVVNSGYLPTYGSRKALEVKAVQPIE VEVLLPEGGEIVSGERRQEIGQLEGRANKRALWGGSFPTDHLRRLTWTVRAPAGSSVSVVARSQRAGTARATVQLDG
Specific function: Combines the specificities of mammalian Cpase A and B [H]
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M14 family [H]
Homologues:
Organism=Homo sapiens, GI217416390, Length=345, Percent_Identity=24.9275362318841, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI53832021, Length=132, Percent_Identity=34.8484848484849, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI38327526, Length=132, Percent_Identity=34.8484848484849, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI6631081, Length=132, Percent_Identity=34.8484848484849, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI22202611, Length=116, Percent_Identity=30.1724137931034, Blast_Score=73, Evalue=7e-13, Organism=Caenorhabditis elegans, GI25143424, Length=277, Percent_Identity=26.3537906137184, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI32563693, Length=334, Percent_Identity=27.5449101796407, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI32563699, Length=348, Percent_Identity=24.1379310344828, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193207630, Length=134, Percent_Identity=36.5671641791045, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71990283, Length=113, Percent_Identity=31.858407079646, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25141274, Length=114, Percent_Identity=29.8245614035088, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI221372165, Length=113, Percent_Identity=35.3982300884956, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI221372158, Length=113, Percent_Identity=35.3982300884956, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI221372169, Length=113, Percent_Identity=35.3982300884956, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI221372162, Length=113, Percent_Identity=35.3982300884956, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 62971; Mature: 62840
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIDFTRYYRPHEVEAALKAWAEEYPHLCSLRSIGTSYEGRSIWLLTLTNQATGADDEK CCCCCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCC PAFWLDANIHATEVTGCMGALHVIQTVLTGYGHDPNLTALLDERALYIVPCLNPDGMEQA CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCHHHH LTSPVYVRSGTRRYPFTDDRDGLYPADIDGDGLILQMRVVDPDGGWKVSERDPRLMRRRA HCCCEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHCC PDERGGTYYRVYTEGLIRNFDGYEVKIAPPAQGLDFNRNFPYIWAPEGVQRGAGPYPTSE CCCCCCCEEEEEECHHHCCCCCCEEEECCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCC PEIRAAVEFLTSHLNVSGAISYHTYSGAILRPYSDKPDDQMPIDDLWTYKELGNRGQEIT HHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCC GYKHVSVYHGFRYHPREVMRGAFDDWAYEQLGIFAFTVELWDMIGEAGIKDRDFIEWFRD CEEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHEEEHHHHHHHHHHCCCCCHHHHHHHHC HPEEDDLKLLRWNDEQLGGAGFVNWRPFNHPQLGPVEIGGWIERRTFGNPPEQFLLRTLE CCCCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCEEECCEEEECCCCCCHHHHHHHHCC PNTRFVLAFAQTGPRLELRHVQAEALGGDLYRLQAVVVNSGYLPTYGSRKALEVKAVQPI CCCEEEEEEECCCCCEEEEEEEHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCE EVEVLLPEGGEIVSGERRQEIGQLEGRANKRALWGGSFPTDHLRRLTWTVRAPAGSSVSV EEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHEEEEEEEECCCCCCEEE VARSQRAGTARATVQLDG EEECCCCCCEEEEEEECC >Mature Secondary Structure PAIDFTRYYRPHEVEAALKAWAEEYPHLCSLRSIGTSYEGRSIWLLTLTNQATGADDEK CCCCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCC PAFWLDANIHATEVTGCMGALHVIQTVLTGYGHDPNLTALLDERALYIVPCLNPDGMEQA CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCHHHH LTSPVYVRSGTRRYPFTDDRDGLYPADIDGDGLILQMRVVDPDGGWKVSERDPRLMRRRA HCCCEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHCC PDERGGTYYRVYTEGLIRNFDGYEVKIAPPAQGLDFNRNFPYIWAPEGVQRGAGPYPTSE CCCCCCCEEEEEECHHHCCCCCCEEEECCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCC PEIRAAVEFLTSHLNVSGAISYHTYSGAILRPYSDKPDDQMPIDDLWTYKELGNRGQEIT HHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCC GYKHVSVYHGFRYHPREVMRGAFDDWAYEQLGIFAFTVELWDMIGEAGIKDRDFIEWFRD CEEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHEEEHHHHHHHHHHCCCCCHHHHHHHHC HPEEDDLKLLRWNDEQLGGAGFVNWRPFNHPQLGPVEIGGWIERRTFGNPPEQFLLRTLE CCCCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCEEECCEEEECCCCCCHHHHHHHHCC PNTRFVLAFAQTGPRLELRHVQAEALGGDLYRLQAVVVNSGYLPTYGSRKALEVKAVQPI CCCEEEEEEECCCCCEEEEEEEHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCE EVEVLLPEGGEIVSGERRQEIGQLEGRANKRALWGGSFPTDHLRRLTWTVRAPAGSSVSV EEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHEEEEEEEECCCCCCEEE VARSQRAGTARATVQLDG EEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA