| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mngB [H]
Identifier: 222524490
GI number: 222524490
Start: 1547240
End: 1549963
Strand: Direct
Name: mngB [H]
Synonym: Chy400_1214
Alternate gene names: 222524490
Gene position: 1547240-1549963 (Clockwise)
Preceding gene: 222524489
Following gene: 222524491
Centisome position: 29.37
GC content: 53.16
Gene sequence:
>2724_bases ATGGCGTGCCGCCGTGCTCATTATGTGCTCAGTACCCACTGGGATCGTGAGTGGTACCGTCCATTTCAACATTTTCGCTA TGCGTTGGTAGCATTGCTCGATACTGTGCTCGATGGCTTGAATAACGGTGCTTTGCCTGGCCCATTTACCACGGATGGTC AGGCCGTTCTCCTGGAAGATTATCTCGAAGTGCGACCGGAGCGTCGGGAACAGATTGTCACATTAGCCGCTAACGGTAAA CTGGTGATAGGCCCGTGGTATGTAGCTCCCGATGAGTTTCTAAGTGGTGGTGAAGCGTTGATTCGTAATCTGCGGCGCGG TGCTCACGTTGCCCGACAGTTGGGCGGGCAGCCATCACGGGCTGGGCTGGTATGCGATCAGTTTGGGCATATTGGTCAGT TACCTCAGTTACTGGCCGGGTTTGGGATACACGGGATTCTCCTTTGGCGTGGTACAAACGAGCAAGCCCGCCACTTTCGC TGGTACGGTAGTGATGGCACGATGATGCCGGTCTATCGTTTTGGCCGTGTCGGGTATTGTAGTTTTGCCTTCGATGTTCG TCGTGCTGATTTATCCGGCTCTTCGCCTACCCGATCGGAACTTACTGCAAATCTGGCGGCATTTATTGCTGCTGAAGCTG CCGCTACGTCATTACCATCCATTCTCCTCTTTGATGGTGGTGATCATCTGGCCTGGGATCCACAAGTAACTGAGGTATTG CAATCGTATGCCGCAGATCCTGCTGCACCGGTTGAGATCGTTTTCAGCGATCTTGACTCCTACCTTGATGATATTCTGCC ACACGTTGATATGATTACTACCGAAGCCCGTGGTGAACTACGTGAACCAGCTCTGCCACCTCGTGCTGAAAATGAACAAT ACCTGATACCTGGGGTCTTGAGTAGTCGGATCGATTTGAAGCTGGCAAACGCAGCCTGTGAGCAGTTGTTAACTCAATGG GTTGAACCCTTTACCGCCTGGGCACACCTGGTAGCCGGAGCACCGGACGAAGCGGCATTTCTGGATGAGGGATGGCGCTG GTTGCTACTAAATCATCCACACGACTCGCTGGGTGGATGCAGTATCGATCTGGTGCATCGGGATATGCGCTACCGCTATA GCCAGTGCCGGCAAATTGGTGAACTTCTTACAGCCCAGGCTTTACAACGATTAGCCGCAGCCGTTGCTGACTCAGATTCC AATCAGGGCCGACGTTTAGTCGTCTTTAACCCATTACCTGTATCCGTTCAAGAGACTGTTGAATTAACTATCGAGCTACC CCCAGATTGGCCTGCTTTTGCCGAGTTCTTTGGTTTTGAGTCATTACCGGCGTTCCGTATCTATGATGCGGACGGACACG AAATTCCTTATCAACGACTTGCTCAGCACCGCCAGCGAACGCGCTTCACCTGCTTCCCCCACACCTTTCCCGATGTCTAT CAGGTCGATGAAGTGAAAGTGAGTCTCCCTCTCTCGCTCCCGCCGTTGGGTTACACTACACTGACGGTTCAGCCGGGGGA TCTCGATCCACTGCCCGCCCATCCGGCCCGGCGAACACCCGCACAACCTATCCGCTATCCAGGACAGGGCATGCTGATTG GTGAACGTCGCATAAGTAATGGGCGCTTGACGGTCGAGGTGGCTCACGATGGCACTCTGACAATTCATGATTTGGTTCAC GGGCAAGAATACCAGGGATTACTTGAGCTAAGTGATGACGCCGACATTGGTGATGGCTGGTACCACGGTCCGGCCCTGGC CGGTAACCCAACAGTGAGTAGCACCATGCTCAGTGTGAGCGTCATTCATAATGGTCCCTTTCTGACGACTCTGCGTGTTC AACGACAACTGCTCGTACCGGCCAACTTTGATTTTAACCTGATGCAGCGAGCCACTCATCTGGTTGAGTTACCGGTAACC ATCGATCTGAGTTTACGCCCTGAGAGCGACCGTCTCGAAATTCAGCTCTACCTCTGTAATACAGCCGCCGATCATCGCTT GCGGCTCCTGTTCCCAACCCATGCCCCGGCAACAACCTATCTGGCGGATGGGGCATTTGATGTTGTTGAACGGGCAATTT CGTTACGACCCGATAACTACCGCTATCGTGAACTCGAAGTAGAAACTCGCCCCCAGCGCAGTTGGACGGCAGTGTTTGCA GACGGACGAGGACTGGCATTGATTGCACCGGGTTTGCTGGAAACAGCGGTGCTTGATCGTCCTGATCGAGCGATTGCTCT GACGCTTTTACGGAGCACTCGTCGTACAGTCTTCACCGATGGCGAACCTGATGGATTACTGCTCAACACAGAACTTCATT ACCGCATGTGGTTACTCCCGTTAAGTGCTACACCTGATCGAGCACGCCTCAACCTCCTTGCCCAGCAGTTGGCAGGTGGG ATTCAATCAGTGCATTGTCGTCAACCAGACTATGGTCGACTCCCCCGCACTGCCAGCCTGCTCGTACTTGAAGGTCCGCT GACGTTAAGTTGTCTCAGACTGGCAGCAACACGCAGAATAGAAGTACGGGTGTTTAATCCGTATGAAACTCCTGAGTCTG GTAAACTCCACCTGGCATTGCCTGTTGAGGCAGCCCAACCGATCACGTTAGCTGGAGAAGCATTAGCCCCGCCGCAACCC TTGACAGATCGAACCTTACACATTCATTGTGGACCAAAGGAAATTCAAAGCTGGTGGTTCATCATTGGTGAGGAGGCGAC CTAA
Upstream 100 bases:
>100_bases TGGTCTGAGCGGCGCAGTTAAGGGATAATAATATCAGGTTCTGTCAAACCCCTGTTGAATAGCAATAGCTCATCGTGTCT TGAAGGAATGGAGATCATCG
Downstream 100 bases:
>100_bases TGAATGCATTGAGTGAACAACTACTAATCTGGTTCGCCGGTGATGAAGTACCATCACATCTGCCGGACCTGATCTTCAAC CATCGCGTTGCCGGTGTGAC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 907; Mature: 906
Protein sequence:
>907_residues MACRRAHYVLSTHWDREWYRPFQHFRYALVALLDTVLDGLNNGALPGPFTTDGQAVLLEDYLEVRPERREQIVTLAANGK LVIGPWYVAPDEFLSGGEALIRNLRRGAHVARQLGGQPSRAGLVCDQFGHIGQLPQLLAGFGIHGILLWRGTNEQARHFR WYGSDGTMMPVYRFGRVGYCSFAFDVRRADLSGSSPTRSELTANLAAFIAAEAAATSLPSILLFDGGDHLAWDPQVTEVL QSYAADPAAPVEIVFSDLDSYLDDILPHVDMITTEARGELREPALPPRAENEQYLIPGVLSSRIDLKLANAACEQLLTQW VEPFTAWAHLVAGAPDEAAFLDEGWRWLLLNHPHDSLGGCSIDLVHRDMRYRYSQCRQIGELLTAQALQRLAAAVADSDS NQGRRLVVFNPLPVSVQETVELTIELPPDWPAFAEFFGFESLPAFRIYDADGHEIPYQRLAQHRQRTRFTCFPHTFPDVY QVDEVKVSLPLSLPPLGYTTLTVQPGDLDPLPAHPARRTPAQPIRYPGQGMLIGERRISNGRLTVEVAHDGTLTIHDLVH GQEYQGLLELSDDADIGDGWYHGPALAGNPTVSSTMLSVSVIHNGPFLTTLRVQRQLLVPANFDFNLMQRATHLVELPVT IDLSLRPESDRLEIQLYLCNTAADHRLRLLFPTHAPATTYLADGAFDVVERAISLRPDNYRYRELEVETRPQRSWTAVFA DGRGLALIAPGLLETAVLDRPDRAIALTLLRSTRRTVFTDGEPDGLLLNTELHYRMWLLPLSATPDRARLNLLAQQLAGG IQSVHCRQPDYGRLPRTASLLVLEGPLTLSCLRLAATRRIEVRVFNPYETPESGKLHLALPVEAAQPITLAGEALAPPQP LTDRTLHIHCGPKEIQSWWFIIGEEAT
Sequences:
>Translated_907_residues MACRRAHYVLSTHWDREWYRPFQHFRYALVALLDTVLDGLNNGALPGPFTTDGQAVLLEDYLEVRPERREQIVTLAANGK LVIGPWYVAPDEFLSGGEALIRNLRRGAHVARQLGGQPSRAGLVCDQFGHIGQLPQLLAGFGIHGILLWRGTNEQARHFR WYGSDGTMMPVYRFGRVGYCSFAFDVRRADLSGSSPTRSELTANLAAFIAAEAAATSLPSILLFDGGDHLAWDPQVTEVL QSYAADPAAPVEIVFSDLDSYLDDILPHVDMITTEARGELREPALPPRAENEQYLIPGVLSSRIDLKLANAACEQLLTQW VEPFTAWAHLVAGAPDEAAFLDEGWRWLLLNHPHDSLGGCSIDLVHRDMRYRYSQCRQIGELLTAQALQRLAAAVADSDS NQGRRLVVFNPLPVSVQETVELTIELPPDWPAFAEFFGFESLPAFRIYDADGHEIPYQRLAQHRQRTRFTCFPHTFPDVY QVDEVKVSLPLSLPPLGYTTLTVQPGDLDPLPAHPARRTPAQPIRYPGQGMLIGERRISNGRLTVEVAHDGTLTIHDLVH GQEYQGLLELSDDADIGDGWYHGPALAGNPTVSSTMLSVSVIHNGPFLTTLRVQRQLLVPANFDFNLMQRATHLVELPVT IDLSLRPESDRLEIQLYLCNTAADHRLRLLFPTHAPATTYLADGAFDVVERAISLRPDNYRYRELEVETRPQRSWTAVFA DGRGLALIAPGLLETAVLDRPDRAIALTLLRSTRRTVFTDGEPDGLLLNTELHYRMWLLPLSATPDRARLNLLAQQLAGG IQSVHCRQPDYGRLPRTASLLVLEGPLTLSCLRLAATRRIEVRVFNPYETPESGKLHLALPVEAAQPITLAGEALAPPQP LTDRTLHIHCGPKEIQSWWFIIGEEAT >Mature_906_residues ACRRAHYVLSTHWDREWYRPFQHFRYALVALLDTVLDGLNNGALPGPFTTDGQAVLLEDYLEVRPERREQIVTLAANGKL VIGPWYVAPDEFLSGGEALIRNLRRGAHVARQLGGQPSRAGLVCDQFGHIGQLPQLLAGFGIHGILLWRGTNEQARHFRW YGSDGTMMPVYRFGRVGYCSFAFDVRRADLSGSSPTRSELTANLAAFIAAEAAATSLPSILLFDGGDHLAWDPQVTEVLQ SYAADPAAPVEIVFSDLDSYLDDILPHVDMITTEARGELREPALPPRAENEQYLIPGVLSSRIDLKLANAACEQLLTQWV EPFTAWAHLVAGAPDEAAFLDEGWRWLLLNHPHDSLGGCSIDLVHRDMRYRYSQCRQIGELLTAQALQRLAAAVADSDSN QGRRLVVFNPLPVSVQETVELTIELPPDWPAFAEFFGFESLPAFRIYDADGHEIPYQRLAQHRQRTRFTCFPHTFPDVYQ VDEVKVSLPLSLPPLGYTTLTVQPGDLDPLPAHPARRTPAQPIRYPGQGMLIGERRISNGRLTVEVAHDGTLTIHDLVHG QEYQGLLELSDDADIGDGWYHGPALAGNPTVSSTMLSVSVIHNGPFLTTLRVQRQLLVPANFDFNLMQRATHLVELPVTI DLSLRPESDRLEIQLYLCNTAADHRLRLLFPTHAPATTYLADGAFDVVERAISLRPDNYRYRELEVETRPQRSWTAVFAD GRGLALIAPGLLETAVLDRPDRAIALTLLRSTRRTVFTDGEPDGLLLNTELHYRMWLLPLSATPDRARLNLLAQQLAGGI QSVHCRQPDYGRLPRTASLLVLEGPLTLSCLRLAATRRIEVRVFNPYETPESGKLHLALPVEAAQPITLAGEALAPPQPL TDRTLHIHCGPKEIQSWWFIIGEEAT
Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 38 family [H]
Homologues:
Organism=Escherichia coli, GI1786952, Length=889, Percent_Identity=25.7592800899887, Blast_Score=233, Evalue=3e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR011682 - InterPro: IPR015341 - InterPro: IPR000602 [H]
Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]
EC number: NA
Molecular weight: Translated: 100984; Mature: 100853
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACRRAHYVLSTHWDREWYRPFQHFRYALVALLDTVLDGLNNGALPGPFTTDGQAVLLED CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEH YLEVRPERREQIVTLAANGKLVIGPWYVAPDEFLSGGEALIRNLRRGAHVARQLGGQPSR HHHCCCCCCCEEEEEEECCEEEEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC AGLVCDQFGHIGQLPQLLAGFGIHGILLWRGTNEQARHFRWYGSDGTMMPVYRFGRVGYC CCEEHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHHCCCCEEE SFAFDVRRADLSGSSPTRSELTANLAAFIAAEAAATSLPSILLFDGGDHLAWDPQVTEVL EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECHHHHHHH QSYAADPAAPVEIVFSDLDSYLDDILPHVDMITTEARGELREPALPPRAENEQYLIPGVL HHHCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCEEECHHH SSRIDLKLANAACEQLLTQWVEPFTAWAHLVAGAPDEAAFLDEGWRWLLLNHPHDSLGGC CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCCCCC SIDLVHRDMRYRYSQCRQIGELLTAQALQRLAAAVADSDSNQGRRLVVFNPLPVSVQETV EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEE ELTIELPPDWPAFAEFFGFESLPAFRIYDADGHEIPYQRLAQHRQRTRFTCFPHTFPDVY EEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCCCE QVDEVKVSLPLSLPPLGYTTLTVQPGDLDPLPAHPARRTPAQPIRYPGQGMLIGERRISN EECEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEECCC GRLTVEVAHDGTLTIHDLVHGQEYQGLLELSDDADIGDGWYHGPALAGNPTVSSTMLSVS CEEEEEEECCCEEEEEHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE VIHNGPFLTTLRVQRQLLVPANFDFNLMQRATHLVELPVTIDLSLRPESDRLEIQLYLCN EEECCCEEEEEEECEEEEECCCCCHHHHHHHHHEEEECEEEEEEECCCCCCEEEEEEEEC TAADHRLRLLFPTHAPATTYLADGAFDVVERAISLRPDNYRYRELEVETRPQRSWTAVFA CCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEE DGRGLALIAPGLLETAVLDRPDRAIALTLLRSTRRTVFTDGEPDGLLLNTELHYRMWLLP CCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCEEEECEEEEEEEEEE LSATPDRARLNLLAQQLAGGIQSVHCRQPDYGRLPRTASLLVLEGPLTLSCLRLAATRRI ECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCEE EVRVFNPYETPESGKLHLALPVEAAQPITLAGEALAPPQPLTDRTLHIHCGPKEIQSWWF EEEEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHCCEEE IIGEEAT EEECCCC >Mature Secondary Structure ACRRAHYVLSTHWDREWYRPFQHFRYALVALLDTVLDGLNNGALPGPFTTDGQAVLLED CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEH YLEVRPERREQIVTLAANGKLVIGPWYVAPDEFLSGGEALIRNLRRGAHVARQLGGQPSR HHHCCCCCCCEEEEEEECCEEEEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC AGLVCDQFGHIGQLPQLLAGFGIHGILLWRGTNEQARHFRWYGSDGTMMPVYRFGRVGYC CCEEHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHHCCCCEEE SFAFDVRRADLSGSSPTRSELTANLAAFIAAEAAATSLPSILLFDGGDHLAWDPQVTEVL EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECHHHHHHH QSYAADPAAPVEIVFSDLDSYLDDILPHVDMITTEARGELREPALPPRAENEQYLIPGVL HHHCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCEEECHHH SSRIDLKLANAACEQLLTQWVEPFTAWAHLVAGAPDEAAFLDEGWRWLLLNHPHDSLGGC CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCCCCC SIDLVHRDMRYRYSQCRQIGELLTAQALQRLAAAVADSDSNQGRRLVVFNPLPVSVQETV EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEE ELTIELPPDWPAFAEFFGFESLPAFRIYDADGHEIPYQRLAQHRQRTRFTCFPHTFPDVY EEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCCCE QVDEVKVSLPLSLPPLGYTTLTVQPGDLDPLPAHPARRTPAQPIRYPGQGMLIGERRISN EECEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEECCC GRLTVEVAHDGTLTIHDLVHGQEYQGLLELSDDADIGDGWYHGPALAGNPTVSSTMLSVS CEEEEEEECCCEEEEEHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE VIHNGPFLTTLRVQRQLLVPANFDFNLMQRATHLVELPVTIDLSLRPESDRLEIQLYLCN EEECCCEEEEEEECEEEEECCCCCHHHHHHHHHEEEECEEEEEEECCCCCCEEEEEEEEC TAADHRLRLLFPTHAPATTYLADGAFDVVERAISLRPDNYRYRELEVETRPQRSWTAVFA CCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEE DGRGLALIAPGLLETAVLDRPDRAIALTLLRSTRRTVFTDGEPDGLLLNTELHYRMWLLP CCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCEEEECEEEEEEEEEE LSATPDRARLNLLAQQLAGGIQSVHCRQPDYGRLPRTASLLVLEGPLTLSCLRLAATRRI ECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCEE EVRVFNPYETPESGKLHLALPVEAAQPITLAGEALAPPQPLTDRTLHIHCGPKEIQSWWF EEEEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHCCEEE IIGEEAT EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]