Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222524475

Identifier: 222524475

GI number: 222524475

Start: 1528343

End: 1530046

Strand: Direct

Name: 222524475

Synonym: Chy400_1199

Alternate gene names: NA

Gene position: 1528343-1530046 (Clockwise)

Preceding gene: 222524474

Following gene: 222524476

Centisome position: 29.01

GC content: 60.15

Gene sequence:

>1704_bases
ATGGGTCTTATCGCTAGCTTTATCAGCCTGATCACAGGTGCCGTGTTCTGTTTTGGGCTGGCCCGGATTGGAATTACCCG
CCGTCTGGCATTGCTGGCCGCGCTGGCGACCGGCCTGGCAGCTATTGGTGTCATCGCCAATCCGCTAGAAACGACCCCGG
CAGAACCGCTGTCGAGTATCGGTGCATTATCGCTCGTTCTGCCGGCAGCGCCCGAACTGAGTGAACGAGCAATTGCGGTC
ATGTTCCTGGTTGGGGGCACCCTTGGCTTACTGGCCCTGGCCGTGGTTGTACCGCCGGAGGTAGAGGGATTTGGCGCGTT
GTTCGGCTGGCTCTTGCTGGCCCTGACTGCCGCCCTGCTCAGCTTAACCATTCCACCGCTCAGCTTTCTGACCCCGTTGA
GCTGGGCACTGGCGGTGATTGCCGCTCATGGAGCGCTGATTGCCGCAGGCGTTGATCCAGCACCTGATCAATTACCGCCC
CATTTGATTGCCGGCGGGCTAGCCGTGGTCGCTGTGACAGGTCTGATTGCAACGAGCGCCGCCTTACCTCCAGACACCCT
GCCACCAACTACGCTGGTCGGACTGGCGCTGTTCGGTGCGCTGGCTTTGGCCGGAGCACCTCCCTTTGGCGGTGCGCGCA
GTGCTTTTACCGCGGCACCGGCCCTGGTGGCTGCGCTCATGAGCGGACTGACCCTGCCCACTATTGGGCTTGGCTTTATC
GTTCGTTTCCTGCCACAGATACCTCCTTTGCCGGCATCAACCGGTTTCATCATGGCTGCTGTTGGCGCATTTGGGGCACT
GGGGGCAGCATTCACCGCCCTCAATGCGCAGTCCGGTCGCGATCTGGTCGCTCGCCACGGCGCGTTGCAGGCAGGAGTGG
TCGTATGCGCGGCTGCCCTCAATGAACCGTTAGCTGGTCTGGCAGCACCGGCCCTGTTGTTGTCGCTCCAGCTCCACGCC
GTTGCCGGCGGATTGGTTTGCGCTGCGATTGAACGACTGCAAGGTTCCGACCTGCTCGATGGCAAGCAACCGACAGCACA
ACTACCGTTCATTGGCCTGATCTGGCTTGTGACAACGGCAGCCGCAACCGGTCTACCGCTGACCTGGAGCTTTTGGGGAT
GGCGCTGGCTGATAGAGGCCGCCACCAGCCATCACGTGTGGATTATTGGCCCCTTGATGACTGCGGCAGTTATCGGTTTT
GCCGCCGGATTGCCACTGCTCATTCGTTGCTGGCAGGGGAAAACACCAGTTTATACACATTGGCCAGAGGGTATGCTAAG
CCTGCCGATCCTGATCCCCTTGATCCTGGCCGGGTTTGTGCCCTGGCTGGCCTGGCCACTCTGGCTGAGCTGGTCACCGT
TCGCCCCACCGGTCATGCCTGCCGAACCACTTGCCTGGCCTTTTATCGGCACGGCCATCGCGACCGGCGTCATAAGCTGG
TTCCTGTTACGCAAGGCCAATCCCTACCAGACAGAGCGTATGCCTGAAGACCCGGCAGTCAGTCCAACCTGGCAAGGCAT
GGGAGAACTCTTGCAGGGCATGAGCGAGCTGGCCGATGCCCGTCGGCTATTCAGCCTTCTCGGTCATGGGATCGACCGCG
TAAGCAGCTCGCTCCATACCATTATGATCATCTTTGAGCAACGGTATTATCTATTTGGGGTGATGATTGGCCTGTTGGCA
ATCCTGTTTCTGATGGCGCAATAG

Upstream 100 bases:

>100_bases
TCGGACGTAGTTAGTGTCCAGAACCCTGATGCCGCATTGCAGAGCCGTGTCTATGTAGTGTGTCACCCGGTGGAGTACCG
GGTTGTTATATCGAGGATGC

Downstream 100 bases:

>100_bases
AAACCCGGTAACAAGACGCGGCCCGGATAGGTGAAGAGTAACCTTCACCTACTCAAAATAAAACCCGTTGCAGCTTGTTC
GGATAGACGTTCAAGATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MGLIASFISLITGAVFCFGLARIGITRRLALLAALATGLAAIGVIANPLETTPAEPLSSIGALSLVLPAAPELSERAIAV
MFLVGGTLGLLALAVVVPPEVEGFGALFGWLLLALTAALLSLTIPPLSFLTPLSWALAVIAAHGALIAAGVDPAPDQLPP
HLIAGGLAVVAVTGLIATSAALPPDTLPPTTLVGLALFGALALAGAPPFGGARSAFTAAPALVAALMSGLTLPTIGLGFI
VRFLPQIPPLPASTGFIMAAVGAFGALGAAFTALNAQSGRDLVARHGALQAGVVVCAAALNEPLAGLAAPALLLSLQLHA
VAGGLVCAAIERLQGSDLLDGKQPTAQLPFIGLIWLVTTAAATGLPLTWSFWGWRWLIEAATSHHVWIIGPLMTAAVIGF
AAGLPLLIRCWQGKTPVYTHWPEGMLSLPILIPLILAGFVPWLAWPLWLSWSPFAPPVMPAEPLAWPFIGTAIATGVISW
FLLRKANPYQTERMPEDPAVSPTWQGMGELLQGMSELADARRLFSLLGHGIDRVSSSLHTIMIIFEQRYYLFGVMIGLLA
ILFLMAQ

Sequences:

>Translated_567_residues
MGLIASFISLITGAVFCFGLARIGITRRLALLAALATGLAAIGVIANPLETTPAEPLSSIGALSLVLPAAPELSERAIAV
MFLVGGTLGLLALAVVVPPEVEGFGALFGWLLLALTAALLSLTIPPLSFLTPLSWALAVIAAHGALIAAGVDPAPDQLPP
HLIAGGLAVVAVTGLIATSAALPPDTLPPTTLVGLALFGALALAGAPPFGGARSAFTAAPALVAALMSGLTLPTIGLGFI
VRFLPQIPPLPASTGFIMAAVGAFGALGAAFTALNAQSGRDLVARHGALQAGVVVCAAALNEPLAGLAAPALLLSLQLHA
VAGGLVCAAIERLQGSDLLDGKQPTAQLPFIGLIWLVTTAAATGLPLTWSFWGWRWLIEAATSHHVWIIGPLMTAAVIGF
AAGLPLLIRCWQGKTPVYTHWPEGMLSLPILIPLILAGFVPWLAWPLWLSWSPFAPPVMPAEPLAWPFIGTAIATGVISW
FLLRKANPYQTERMPEDPAVSPTWQGMGELLQGMSELADARRLFSLLGHGIDRVSSSLHTIMIIFEQRYYLFGVMIGLLA
ILFLMAQ
>Mature_566_residues
GLIASFISLITGAVFCFGLARIGITRRLALLAALATGLAAIGVIANPLETTPAEPLSSIGALSLVLPAAPELSERAIAVM
FLVGGTLGLLALAVVVPPEVEGFGALFGWLLLALTAALLSLTIPPLSFLTPLSWALAVIAAHGALIAAGVDPAPDQLPPH
LIAGGLAVVAVTGLIATSAALPPDTLPPTTLVGLALFGALALAGAPPFGGARSAFTAAPALVAALMSGLTLPTIGLGFIV
RFLPQIPPLPASTGFIMAAVGAFGALGAAFTALNAQSGRDLVARHGALQAGVVVCAAALNEPLAGLAAPALLLSLQLHAV
AGGLVCAAIERLQGSDLLDGKQPTAQLPFIGLIWLVTTAAATGLPLTWSFWGWRWLIEAATSHHVWIIGPLMTAAVIGFA
AGLPLLIRCWQGKTPVYTHWPEGMLSLPILIPLILAGFVPWLAWPLWLSWSPFAPPVMPAEPLAWPFIGTAIATGVISWF
LLRKANPYQTERMPEDPAVSPTWQGMGELLQGMSELADARRLFSLLGHGIDRVSSSLHTIMIIFEQRYYLFGVMIGLLAI
LFLMAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58691; Mature: 58559

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIASFISLITGAVFCFGLARIGITRRLALLAALATGLAAIGVIANPLETTPAEPLSSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
GALSLVLPAAPELSERAIAVMFLVGGTLGLLALAVVVPPEVEGFGALFGWLLLALTAALL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLTIPPLSFLTPLSWALAVIAAHGALIAAGVDPAPDQLPPHLIAGGLAVVAVTGLIATSA
HHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
ALPPDTLPPTTLVGLALFGALALAGAPPFGGARSAFTAAPALVAALMSGLTLPTIGLGFI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VRFLPQIPPLPASTGFIMAAVGAFGALGAAFTALNAQSGRDLVARHGALQAGVVVCAAAL
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH
NEPLAGLAAPALLLSLQLHAVAGGLVCAAIERLQGSDLLDGKQPTAQLPFIGLIWLVTTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
AATGLPLTWSFWGWRWLIEAATSHHVWIIGPLMTAAVIGFAAGLPLLIRCWQGKTPVYTH
HHCCCCCEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEE
WPEGMLSLPILIPLILAGFVPWLAWPLWLSWSPFAPPVMPAEPLAWPFIGTAIATGVISW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FLLRKANPYQTERMPEDPAVSPTWQGMGELLQGMSELADARRLFSLLGHGIDRVSSSLHT
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IMIIFEQRYYLFGVMIGLLAILFLMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLIASFISLITGAVFCFGLARIGITRRLALLAALATGLAAIGVIANPLETTPAEPLSSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
GALSLVLPAAPELSERAIAVMFLVGGTLGLLALAVVVPPEVEGFGALFGWLLLALTAALL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLTIPPLSFLTPLSWALAVIAAHGALIAAGVDPAPDQLPPHLIAGGLAVVAVTGLIATSA
HHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
ALPPDTLPPTTLVGLALFGALALAGAPPFGGARSAFTAAPALVAALMSGLTLPTIGLGFI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VRFLPQIPPLPASTGFIMAAVGAFGALGAAFTALNAQSGRDLVARHGALQAGVVVCAAAL
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH
NEPLAGLAAPALLLSLQLHAVAGGLVCAAIERLQGSDLLDGKQPTAQLPFIGLIWLVTTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
AATGLPLTWSFWGWRWLIEAATSHHVWIIGPLMTAAVIGFAAGLPLLIRCWQGKTPVYTH
HHCCCCCEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEE
WPEGMLSLPILIPLILAGFVPWLAWPLWLSWSPFAPPVMPAEPLAWPFIGTAIATGVISW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FLLRKANPYQTERMPEDPAVSPTWQGMGELLQGMSELADARRLFSLLGHGIDRVSSSLHT
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IMIIFEQRYYLFGVMIGLLAILFLMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA