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The map label for this gene is ybaV [C]

Identifier: 222524431

GI number: 222524431

Start: 1464449

End: 1465186

Strand: Direct

Name: ybaV [C]

Synonym: Chy400_1155

Alternate gene names: 222524431

Gene position: 1464449-1465186 (Clockwise)

Preceding gene: 222524430

Following gene: 222524432

Centisome position: 27.79

GC content: 58.54

Gene sequence:

>738_bases
ATGTGGCGTAAGTTGCTGTTGGTTGCCTTATTACTCGGGATTGGATACGTGATCTGGCGCCGGATGCAGCGAGATCAAAC
CCCATCACCGGTGTCCGATCTATCACCAGCTCCATCGGCGGCTCCATCAGCGCCGTCACCATCACCAGCGCCGTCAGCAC
CGTCAGCTCCTGCATCCACCAGCAGTGGGCCACGACCGATTGTGACTCGTGTTCATCGTGGTGCGCCACCGACAATTCGG
CGGAGTAGTGCAAGCGCTGAGACGGCTGCGAGTGATCGCAATGGGGTAAACGATGTAGCTTCAGCGTCTGATACTGTTCA
ATCCGCTGCGCCGGTCACCCACGTCTCGACTGGAGACGCCGATGCTTCATCGCAGGTGGCTTCAGCATCTGCAACCACTG
CCGGCATGGTCACAGAACAGCCGGCACCGTCGTCAGACGTGCAAGTCGCAGAGTCGGGTGAGGTCGAATCACCCATCGCC
GAGACCGGGCGGGCAGAGGAGAAGGAAGAAGTATCGGCTGAAGGAACCGAACTGGCGCCGGTTGATATTAACCGCGCTGA
TCGCGAGACCCTGATCGCCTTGCCCGGCATCGGGCCGGTGCTGGCGGATCGCATCATTGCCTACCGCGAAGCTCACGGGC
CGTTCAAGAGTGTTGATGATCTGACGGCCATTTCCGGTATTGGCGAGCGTAATATCAATATCTTCCGTAAGCTGGTATAC
GTTGATCCCAATGCTTGA

Upstream 100 bases:

>100_bases
TATGGCTGAGGATCGCATGAATCTGGCCCTGCTGCGTTCGCTCGTACAGGGTGCCGAATAGAGGTATGGATCCGCATCTA
CAACCGGGGAGCAAACTGTT

Downstream 100 bases:

>100_bases
ACCGTATTTGTTGTCGAGTGGTGATCACGCTTGCTTGCTGATCCACGGGTTTGTCGGCGATCCCGGTGAGATGCGCGATC
TAGGCGATCATCTGGCGCAA

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Competence Protein ComEA Helix-Hairpin-Helix Repeat Protein; Helix-Turn-Helix Domain-Containing Protein; ComEA Protein

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MWRKLLLVALLLGIGYVIWRRMQRDQTPSPVSDLSPAPSAAPSAPSPSPAPSAPSAPASTSSGPRPIVTRVHRGAPPTIR
RSSASAETAASDRNGVNDVASASDTVQSAAPVTHVSTGDADASSQVASASATTAGMVTEQPAPSSDVQVAESGEVESPIA
ETGRAEEKEEVSAEGTELAPVDINRADRETLIALPGIGPVLADRIIAYREAHGPFKSVDDLTAISGIGERNINIFRKLVY
VDPNA

Sequences:

>Translated_245_residues
MWRKLLLVALLLGIGYVIWRRMQRDQTPSPVSDLSPAPSAAPSAPSPSPAPSAPSAPASTSSGPRPIVTRVHRGAPPTIR
RSSASAETAASDRNGVNDVASASDTVQSAAPVTHVSTGDADASSQVASASATTAGMVTEQPAPSSDVQVAESGEVESPIA
ETGRAEEKEEVSAEGTELAPVDINRADRETLIALPGIGPVLADRIIAYREAHGPFKSVDDLTAISGIGERNINIFRKLVY
VDPNA
>Mature_245_residues
MWRKLLLVALLLGIGYVIWRRMQRDQTPSPVSDLSPAPSAAPSAPSPSPAPSAPSAPASTSSGPRPIVTRVHRGAPPTIR
RSSASAETAASDRNGVNDVASASDTVQSAAPVTHVSTGDADASSQVASASATTAGMVTEQPAPSSDVQVAESGEVESPIA
ETGRAEEKEEVSAEGTELAPVDINRADRETLIALPGIGPVLADRIIAYREAHGPFKSVDDLTAISGIGERNINIFRKLVY
VDPNA

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25318; Mature: 25318

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRKLLLVALLLGIGYVIWRRMQRDQTPSPVSDLSPAPSAAPSAPSPSPAPSAPSAPAST
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSGPRPIVTRVHRGAPPTIRRSSASAETAASDRNGVNDVASASDTVQSAAPVTHVSTGDA
CCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCC
DASSQVASASATTAGMVTEQPAPSSDVQVAESGEVESPIAETGRAEEKEEVSAEGTELAP
CCHHHHHHHCCHHHCCEECCCCCCCCCEECCCCCCCCCHHHCCCCCHHHHHHCCCCEECC
VDINRADRETLIALPGIGPVLADRIIAYREAHGPFKSVDDLTAISGIGERNINIFRKLVY
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHEEHEEEE
VDPNA
ECCCC
>Mature Secondary Structure
MWRKLLLVALLLGIGYVIWRRMQRDQTPSPVSDLSPAPSAAPSAPSPSPAPSAPSAPAST
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSGPRPIVTRVHRGAPPTIRRSSASAETAASDRNGVNDVASASDTVQSAAPVTHVSTGDA
CCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCC
DASSQVASASATTAGMVTEQPAPSSDVQVAESGEVESPIAETGRAEEKEEVSAEGTELAP
CCHHHHHHHCCHHHCCEECCCCCCCCCEECCCCCCCCCHHHCCCCCHHHHHHCCCCEECC
VDINRADRETLIALPGIGPVLADRIIAYREAHGPFKSVDDLTAISGIGERNINIFRKLVY
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHEEHEEEE
VDPNA
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA