| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is est [H]
Identifier: 222524432
GI number: 222524432
Start: 1465179
End: 1465964
Strand: Direct
Name: est [H]
Synonym: Chy400_1156
Alternate gene names: 222524432
Gene position: 1465179-1465964 (Clockwise)
Preceding gene: 222524431
Following gene: 222524436
Centisome position: 27.81
GC content: 60.56
Gene sequence:
>786_bases ATGCTTGAACCGTATTTGTTGTCGAGTGGTGATCACGCTTGCTTGCTGATCCACGGGTTTGTCGGCGATCCCGGTGAGAT GCGCGATCTAGGCGATCATCTGGCGCAAGCCGGCTATACGGTATTTGGTATGCGTCTGCCCGGACATACCGGGAACCCTG AAGACCTGATTGCTGTGCGCTGGACGGACTGGCTGGCTGCGGTGCAGGCGGCATTTGACGCACTCGCCCGCCGGTCTACT GCTGTCTCAGTAGTGGGTTTTTCATTGGGTGGCGCACTGGCCGCGTTGCTGGCAGCACAGCGCCCTGTGCACCGCCTGGT GATGCTGGCAACACCCTACCGCCTTGGTGGCGACTGGCGGGTTGATCTGTTGGGGATTGTCCGCTACGTGACCCCCTGGT TTTATCTGCTGGCCCAGGCCGATTTCAGCAGCCCCGATCTACGGGCATCAATCTGGCGTCGCCAGCCCGGCCTTGATCTC GACGATCCGGTCATTCAACAGATGCTACGACGCTCGGTGAAGGTGTCAGTCGCCGCCGCTGATGAGTTGCGGCTGACTCT GGCAGCCGCTCGTCGTGCACTGCCGCTGGTACGGGCACCAACCCTGATTATGCACGGTCGCAGTGATACAACAGCCGATC CAGCCAGTGCCGCAGCTATCATGGCTCAGATCGGCAGTACTTACCGTGAACTCACATACTGGCCGGCCACCGGTCATCAA CTGCTACTCACCGGGCCGTACCGGTCGGCCATCTTTCAACGGATCACACGGTTTCTCGCCCGCTAG
Upstream 100 bases:
>100_bases GCTCACGGGCCGTTCAAGAGTGTTGATGATCTGACGGCCATTTCCGGTATTGGCGAGCGTAATATCAATATCTTCCGTAA GCTGGTATACGTTGATCCCA
Downstream 100 bases:
>100_bases CCTTTCCCTGCTGCCTGGAACGTATCGTAAACGACTCTACTCTCGCTTGATAACGATCAGCGTAATGTCATCAAACGGGG GCTGACCGTGGCTATGGCGT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MLEPYLLSSGDHACLLIHGFVGDPGEMRDLGDHLAQAGYTVFGMRLPGHTGNPEDLIAVRWTDWLAAVQAAFDALARRST AVSVVGFSLGGALAALLAAQRPVHRLVMLATPYRLGGDWRVDLLGIVRYVTPWFYLLAQADFSSPDLRASIWRRQPGLDL DDPVIQQMLRRSVKVSVAAADELRLTLAAARRALPLVRAPTLIMHGRSDTTADPASAAAIMAQIGSTYRELTYWPATGHQ LLLTGPYRSAIFQRITRFLAR
Sequences:
>Translated_261_residues MLEPYLLSSGDHACLLIHGFVGDPGEMRDLGDHLAQAGYTVFGMRLPGHTGNPEDLIAVRWTDWLAAVQAAFDALARRST AVSVVGFSLGGALAALLAAQRPVHRLVMLATPYRLGGDWRVDLLGIVRYVTPWFYLLAQADFSSPDLRASIWRRQPGLDL DDPVIQQMLRRSVKVSVAAADELRLTLAAARRALPLVRAPTLIMHGRSDTTADPASAAAIMAQIGSTYRELTYWPATGHQ LLLTGPYRSAIFQRITRFLAR >Mature_261_residues MLEPYLLSSGDHACLLIHGFVGDPGEMRDLGDHLAQAGYTVFGMRLPGHTGNPEDLIAVRWTDWLAAVQAAFDALARRST AVSVVGFSLGGALAALLAAQRPVHRLVMLATPYRLGGDWRVDLLGIVRYVTPWFYLLAQADFSSPDLRASIWRRQPGLDL DDPVIQQMLRRSVKVSVAAADELRLTLAAARRALPLVRAPTLIMHGRSDTTADPASAAAIMAQIGSTYRELTYWPATGHQ LLLTGPYRSAIFQRITRFLAR
Specific function: Involved in the detoxification of xenobiotics. Shows maximal activity with C6 substrates, with gradually decreasing activity from C8 to C12 substrates. No activity for higher chain length substrates acids rather than long-chain ones [H]
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012354 - InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 28597; Mature: 28597
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEPYLLSSGDHACLLIHGFVGDPGEMRDLGDHLAQAGYTVFGMRLPGHTGNPEDLIAVR CCCCCEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEE WTDWLAAVQAAFDALARRSTAVSVVGFSLGGALAALLAAQRPVHRLVMLATPYRLGGDWR HHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCH VDLLGIVRYVTPWFYLLAQADFSSPDLRASIWRRQPGLDLDDPVIQQMLRRSVKVSVAAA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEEH DELRLTLAAARRALPLVRAPTLIMHGRSDTTADPASAAAIMAQIGSTYRELTYWPATGHQ HHHHHHHHHHHHHCCHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHEEECCCCCCE LLLTGPYRSAIFQRITRFLAR EEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure MLEPYLLSSGDHACLLIHGFVGDPGEMRDLGDHLAQAGYTVFGMRLPGHTGNPEDLIAVR CCCCCEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEE WTDWLAAVQAAFDALARRSTAVSVVGFSLGGALAALLAAQRPVHRLVMLATPYRLGGDWR HHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCH VDLLGIVRYVTPWFYLLAQADFSSPDLRASIWRRQPGLDLDDPVIQQMLRRSVKVSVAAA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEEH DELRLTLAAARRALPLVRAPTLIMHGRSDTTADPASAAAIMAQIGSTYRELTYWPATGHQ HHHHHHHHHHHHHCCHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHEEECCCCCCE LLLTGPYRSAIFQRITRFLAR EEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1369099 [H]