| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is wcaJ [H]
Identifier: 222524428
GI number: 222524428
Start: 1459791
End: 1461218
Strand: Direct
Name: wcaJ [H]
Synonym: Chy400_1152
Alternate gene names: 222524428
Gene position: 1459791-1461218 (Clockwise)
Preceding gene: 222524427
Following gene: 222524430
Centisome position: 27.71
GC content: 55.39
Gene sequence:
>1428_bases TTGCTGCGTCCGCGGGCGTGGCAGACATTGCTACGTCTGTTACTGATTGTATTCGATATTGCGGCGCTGAATCTGGCGAC GCAGGCAGCGTATGCGCTTGGCGCCGAGTCGCTCGTCAGTGCCGGCTTTCGCCTCCCCGCCGATCCGCTAACGCCACTAC GGCTGAGCGTGCTCGGCAGCATTATCGCACTTATTGTCTTCACCAGCCACGGCCTGTACGAGATGAAGCGTGGTGCCTCA CGTCTTGATGAAGCGGTGAAGGTATTGACCGCAGTCTCGTTTACGATGGTGCTGGTGATCTTCGTGAATGCGCTGATCGG CGAGTTTGGTGGCGAAGAGATGCCATGGACGCGGGAAATCCTCTTTCAGGGCTGGTTGTTGGCGGTCGCTGGCTGTCTGA CCGGTCGGTTTCTTCATCGCACCTTTGTCTACGTGTTGCGCCGCTTTGATATTGATACCCGGCGGGTGTTGATTGTCGGT GCCCGTGAGCCGGGCCGTCTGGTCTGGAATACGATCCGGCGGCGACCTGAGTTGGGCTATCGGGTACAGGGCTTTCTTTC CGATACCGTACCAATCGGCGATCTGGTCGATGGATTACCGGTATTGGGACGCACCGACCATATTCGTCGGGTGATCCGGG CAACCCGTGCCGATGAGGTGATCATTGCGCTCTCCGGTCGTTCCTCGCAAGACCTGCTCGAGGTGATTGCGCTCGCTGAA GATGAATCGGTCGCTATTAAAGTCTATCCCGATACGTTTCAATTGATTACGAACAACGAGGTCTCGATTGGCGATTTGCG CGATCTACCGCTCGTCAGTGTTAAGAATGCCGCACTCGACAATCCATGGAACCGTGCACTCAAACGTGGGCTTGATCTGG TCGTTGCATCGCTGGTACTGCTCGTCGCTGCCCCGGTCATGCTGTTGATTGCGCTCGCTATTCGGCTTGAATCACGTGGG CCGATCTTTTTCCTGCAAGAACGGGTTGGTCTCGATGGTCAGCCCTTCTGGATGATTAAGTTTCGGACAATGCGCCCGGA TGCGGAACGGTTTAGCACCTGGACGGTGCAGAATGATCCACGAGTAACCCGGGTAGGTCGCTTTTTGCGGCGTACCAGTC TTGATGAGTTACCACAGTTGATCAATGTGCTCATCGGTGAGATGTCTATCGTAGGGCCGCGGCCTGAACAGGCCCGTTGG GTTGAACAGTTCCGCCAACAGATTCCGCGCTATATGCGTCGGCATAAAGAAAAGGCCGGCTTAACCGGTTGGGCCCAGGT GAATGGTTTACGCGGTGATACCAGTATCGAAGAGCGCACACGCTACGACCTCTACTACGTCGAAAACTGGTCACTGCTGT TCGACATCAAGATCATTCTGCGCACGATTATCAATTTTATTACCGGTCGGCAGGAAAATGCGTATTGA
Upstream 100 bases:
>100_bases GGTTTGATCGAGTTAGGAATTACTGTAAAGGAGCTGTGGGCACTTGGCCGCAATCTCCTCCTCCCATCCAGGGCGCGCCA CGTCGGTTAGAGCGCGCTCC
Downstream 100 bases:
>100_bases TGGGATAACCTGCGTTGTTACCGGGTGTTGGGGGTAAGCCCTGCCCATAGCGGTAGCTCAAGCGAATCCTGTTCCCCAGC AGTTCAGTGCCGAGCCGGGA
Product: undecaprenyl-phosphate glucose phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MLRPRAWQTLLRLLLIVFDIAALNLATQAAYALGAESLVSAGFRLPADPLTPLRLSVLGSIIALIVFTSHGLYEMKRGAS RLDEAVKVLTAVSFTMVLVIFVNALIGEFGGEEMPWTREILFQGWLLAVAGCLTGRFLHRTFVYVLRRFDIDTRRVLIVG AREPGRLVWNTIRRRPELGYRVQGFLSDTVPIGDLVDGLPVLGRTDHIRRVIRATRADEVIIALSGRSSQDLLEVIALAE DESVAIKVYPDTFQLITNNEVSIGDLRDLPLVSVKNAALDNPWNRALKRGLDLVVASLVLLVAAPVMLLIALAIRLESRG PIFFLQERVGLDGQPFWMIKFRTMRPDAERFSTWTVQNDPRVTRVGRFLRRTSLDELPQLINVLIGEMSIVGPRPEQARW VEQFRQQIPRYMRRHKEKAGLTGWAQVNGLRGDTSIEERTRYDLYYVENWSLLFDIKIILRTIINFITGRQENAY
Sequences:
>Translated_475_residues MLRPRAWQTLLRLLLIVFDIAALNLATQAAYALGAESLVSAGFRLPADPLTPLRLSVLGSIIALIVFTSHGLYEMKRGAS RLDEAVKVLTAVSFTMVLVIFVNALIGEFGGEEMPWTREILFQGWLLAVAGCLTGRFLHRTFVYVLRRFDIDTRRVLIVG AREPGRLVWNTIRRRPELGYRVQGFLSDTVPIGDLVDGLPVLGRTDHIRRVIRATRADEVIIALSGRSSQDLLEVIALAE DESVAIKVYPDTFQLITNNEVSIGDLRDLPLVSVKNAALDNPWNRALKRGLDLVVASLVLLVAAPVMLLIALAIRLESRG PIFFLQERVGLDGQPFWMIKFRTMRPDAERFSTWTVQNDPRVTRVGRFLRRTSLDELPQLINVLIGEMSIVGPRPEQARW VEQFRQQIPRYMRRHKEKAGLTGWAQVNGLRGDTSIEERTRYDLYYVENWSLLFDIKIILRTIINFITGRQENAY >Mature_475_residues MLRPRAWQTLLRLLLIVFDIAALNLATQAAYALGAESLVSAGFRLPADPLTPLRLSVLGSIIALIVFTSHGLYEMKRGAS RLDEAVKVLTAVSFTMVLVIFVNALIGEFGGEEMPWTREILFQGWLLAVAGCLTGRFLHRTFVYVLRRFDIDTRRVLIVG AREPGRLVWNTIRRRPELGYRVQGFLSDTVPIGDLVDGLPVLGRTDHIRRVIRATRADEVIIALSGRSSQDLLEVIALAE DESVAIKVYPDTFQLITNNEVSIGDLRDLPLVSVKNAALDNPWNRALKRGLDLVVASLVLLVAAPVMLLIALAIRLESRG PIFFLQERVGLDGQPFWMIKFRTMRPDAERFSTWTVQNDPRVTRVGRFLRRTSLDELPQLINVLIGEMSIVGPRPEQARW VEQFRQQIPRYMRRHKEKAGLTGWAQVNGLRGDTSIEERTRYDLYYVENWSLLFDIKIILRTIINFITGRQENAY
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=430, Percent_Identity=36.046511627907, Blast_Score=238, Evalue=5e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017473 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 53867; Mature: 53867
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPRAWQTLLRLLLIVFDIAALNLATQAAYALGAESLVSAGFRLPADPLTPLRLSVLGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHH IIALIVFTSHGLYEMKRGASRLDEAVKVLTAVSFTMVLVIFVNALIGEFGGEEMPWTREI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LFQGWLLAVAGCLTGRFLHRTFVYVLRRFDIDTRRVLIVGAREPGRLVWNTIRRRPELGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCC RVQGFLSDTVPIGDLVDGLPVLGRTDHIRRVIRATRADEVIIALSGRSSQDLLEVIALAE EEHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCC DESVAIKVYPDTFQLITNNEVSIGDLRDLPLVSVKNAALDNPWNRALKRGLDLVVASLVL CCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEECHHHCCCHHHHHHHHHHHHHHHHHHH LVAAPVMLLIALAIRLESRGPIFFLQERVGLDGQPFWMIKFRTMRPDAERFSTWTVQNDP HHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCEEEEEEEECCCCHHHHCEEEECCCC RVTRVGRFLRRTSLDELPQLINVLIGEMSIVGPRPEQARWVEQFRQQIPRYMRRHKEKAG CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC LTGWAQVNGLRGDTSIEERTRYDLYYVENWSLLFDIKIILRTIINFITGRQENAY CCCHHHCCCCCCCCCHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLRPRAWQTLLRLLLIVFDIAALNLATQAAYALGAESLVSAGFRLPADPLTPLRLSVLGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHH IIALIVFTSHGLYEMKRGASRLDEAVKVLTAVSFTMVLVIFVNALIGEFGGEEMPWTREI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LFQGWLLAVAGCLTGRFLHRTFVYVLRRFDIDTRRVLIVGAREPGRLVWNTIRRRPELGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCC RVQGFLSDTVPIGDLVDGLPVLGRTDHIRRVIRATRADEVIIALSGRSSQDLLEVIALAE EEHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCC DESVAIKVYPDTFQLITNNEVSIGDLRDLPLVSVKNAALDNPWNRALKRGLDLVVASLVL CCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEECHHHCCCHHHHHHHHHHHHHHHHHHH LVAAPVMLLIALAIRLESRGPIFFLQERVGLDGQPFWMIKFRTMRPDAERFSTWTVQNDP HHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCEEEEEEEECCCCHHHHCEEEECCCC RVTRVGRFLRRTSLDELPQLINVLIGEMSIVGPRPEQARWVEQFRQQIPRYMRRHKEKAG CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC LTGWAQVNGLRGDTSIEERTRYDLYYVENWSLLFDIKIILRTIINFITGRQENAY CCCHHHCCCCCCCCCHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8759852; 9097040; 9278503 [H]