| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is wbbL [H]
Identifier: 222524427
GI number: 222524427
Start: 1458881
End: 1459780
Strand: Direct
Name: wbbL [H]
Synonym: Chy400_1151
Alternate gene names: 222524427
Gene position: 1458881-1459780 (Clockwise)
Preceding gene: 222524424
Following gene: 222524428
Centisome position: 27.69
GC content: 55.22
Gene sequence:
>900_bases ATGAGTAGTCTTGCCGTTGTTATCCTCAACTACAACCGGGCCGATCTGTTAGCTGATTGTCTGGCCTCGATTGCTGCTTC GCCAACCCGCTGCGATCTATCGGTGTGGGTGGTTGACAATGCCTCAACTGATGGTAGCGCCGCAATGGTTCGTGAGCGGT TTGGGTGGGTGCATCTGATCGAGAGTCCGGTCAACGGTGGTTTTTCTGCCGGTAACAATCTGGCGTTACGGCAGATTCTT ACCTTACCCGATCCACCTGACTACATTCTGCTTCTCAATAACGATACCGTAGTACCGCCCGGTGCCCTCGATGGGATGGT TGATTATCTCGACCATCATCCAACGGTCGGCGTCGTGGGACCGAAACTGCTCTTACCCGATGGTTCGCTCGATCTGGCCT GTCGGCGCAGTTTCCCCACTCCTGCAATTGCCTTTTACCGCTTGTTCGGGCTGGCCCGCCTCTTCCCGCGCAGCCGCCGC TTCGCTGCATATAATTTGACTTACCTCGATCCTGATGTGGAGACTGAGGTTGATGCGGTGGTCGGGGCGTGTATGATGGT TCGCACGTCGGTGGTGCGCGAAGTCGGTCTGCTCGATGAGGCGTTCTTCATGTATGGCGAAGACCTTGATTGGGCTTACC GTATTAAGCAGTACGGCTGGAAAGTTGTCTATTACCCTGCGGTAACCGTCTATCATTACAAGCGGGCAGCTTCCAGCCGG CGACCAATTCCGTCAATTCGGGCGTTCTACGACGCGATGCGACTGTTTCATCGCAAGCATTACGCTGCGACGACCCCTGC ATTTCTGAATGGTTTGATCGAGTTAGGAATTACTGTAAAGGAGCTGTGGGCACTTGGCCGCAATCTCCTCCTCCCATCCA GGGCGCGCCACGTCGGTTAG
Upstream 100 bases:
>100_bases CGTCTAATCGATTACCATTCGCTTCTTGCATATAAAACAAGAATAACCTGTGGTATACTGAACCAGGGTTGTCTACCAGT GCAGACCGGGCATGTCGATA
Downstream 100 bases:
>100_bases AGCGCGCTCCTTGCTGCGTCCGCGGGCGTGGCAGACATTGCTACGTCTGTTACTGATTGTATTCGATATTGCGGCGCTGA ATCTGGCGACGCAGGCAGCG
Product: glycosyl transferase family 2 protein
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSSLAVVILNYNRADLLADCLASIAASPTRCDLSVWVVDNASTDGSAAMVRERFGWVHLIESPVNGGFSAGNNLALRQIL TLPDPPDYILLLNNDTVVPPGALDGMVDYLDHHPTVGVVGPKLLLPDGSLDLACRRSFPTPAIAFYRLFGLARLFPRSRR FAAYNLTYLDPDVETEVDAVVGACMMVRTSVVREVGLLDEAFFMYGEDLDWAYRIKQYGWKVVYYPAVTVYHYKRAASSR RPIPSIRAFYDAMRLFHRKHYAATTPAFLNGLIELGITVKELWALGRNLLLPSRARHVG
Sequences:
>Translated_299_residues MSSLAVVILNYNRADLLADCLASIAASPTRCDLSVWVVDNASTDGSAAMVRERFGWVHLIESPVNGGFSAGNNLALRQIL TLPDPPDYILLLNNDTVVPPGALDGMVDYLDHHPTVGVVGPKLLLPDGSLDLACRRSFPTPAIAFYRLFGLARLFPRSRR FAAYNLTYLDPDVETEVDAVVGACMMVRTSVVREVGLLDEAFFMYGEDLDWAYRIKQYGWKVVYYPAVTVYHYKRAASSR RPIPSIRAFYDAMRLFHRKHYAATTPAFLNGLIELGITVKELWALGRNLLLPSRARHVG >Mature_298_residues SSLAVVILNYNRADLLADCLASIAASPTRCDLSVWVVDNASTDGSAAMVRERFGWVHLIESPVNGGFSAGNNLALRQILT LPDPPDYILLLNNDTVVPPGALDGMVDYLDHHPTVGVVGPKLLLPDGSLDLACRRSFPTPAIAFYRLFGLARLFPRSRRF AAYNLTYLDPDVETEVDAVVGACMMVRTSVVREVGLLDEAFFMYGEDLDWAYRIKQYGWKVVYYPAVTVYHYKRAASSRR PIPSIRAFYDAMRLFHRKHYAATTPAFLNGLIELGITVKELWALGRNLLLPSRARHVG
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 33266; Mature: 33135
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLAVVILNYNRADLLADCLASIAASPTRCDLSVWVVDNASTDGSAAMVRERFGWVHLI CCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHCCEEEEE ESPVNGGFSAGNNLALRQILTLPDPPDYILLLNNDTVVPPGALDGMVDYLDHHPTVGVVG ECCCCCCCCCCCCCEEHHEECCCCCCCEEEEECCCEECCCCHHHHHHHHHHCCCCEEECC PKLLLPDGSLDLACRRSFPTPAIAFYRLFGLARLFPRSRRFAAYNLTYLDPDVETEVDAV CEEECCCCCCCHHEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHH VGACMMVRTSVVREVGLLDEAFFMYGEDLDWAYRIKQYGWKVVYYPAVTVYHYKRAASSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCEEEHHHHHHHCCC RPIPSIRAFYDAMRLFHRKHYAATTPAFLNGLIELGITVKELWALGRNLLLPSRARHVG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure SSLAVVILNYNRADLLADCLASIAASPTRCDLSVWVVDNASTDGSAAMVRERFGWVHLI CCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHCCEEEEE ESPVNGGFSAGNNLALRQILTLPDPPDYILLLNNDTVVPPGALDGMVDYLDHHPTVGVVG ECCCCCCCCCCCCCEEHHEECCCCCCCEEEEECCCEECCCCHHHHHHHHHHCCCCEEECC PKLLLPDGSLDLACRRSFPTPAIAFYRLFGLARLFPRSRRFAAYNLTYLDPDVETEVDAV CEEECCCCCCCHHEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHH VGACMMVRTSVVREVGLLDEAFFMYGEDLDWAYRIKQYGWKVVYYPAVTVYHYKRAASSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCEEEHHHHHHHCCC RPIPSIRAFYDAMRLFHRKHYAATTPAFLNGLIELGITVKELWALGRNLLLPSRARHVG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]