| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524424
Identifier: 222524424
GI number: 222524424
Start: 1455403
End: 1456017
Strand: Direct
Name: 222524424
Synonym: Chy400_1148
Alternate gene names: NA
Gene position: 1455403-1456017 (Clockwise)
Preceding gene: 222524420
Following gene: 222524427
Centisome position: 27.62
GC content: 59.84
Gene sequence:
>615_bases ATGGTAACCTCATCACTTCGTCAACGCCTGGGGCGGCGGCTAAGCCCGTTGCCGTATTATGAAGTCATCGTAGCAGAACC GGATCGACTTCACCTGCGATCATACCCCCAGGCCAACCGCAGTCATGCGCTGCCCTCCTTCATTAGTGGCGGTTTGCTGA TGTTCTTCGCAATGGTGATCCTGATTGCCGGTGTGCTGGCAGCTCTGCAAGAGCTGGGATTTGCGGTAGCCGGTCTGAGT GCGGCGCTGGCCGGACTGTTGGGCGGACTCGGCATCCAACGGCTTGTGGGTGGGTATGCCATCGCCACGACAACCAACGA GATTTCACTCGATAGCGACACGTTCGTCATTCGTCAGGTTAGCCGGGTCGGCAGGCCACGTGAACAGCGGATCGCACGTA CCGCCATTCGCGGTCTGCGTCTGCGTCCGTATCGAATCGTAACCGGCGGTCTGATCAGGCGCCTGCAACCGGTGCTTGTG CTGGAGATGCTGGTTGGAGATGAGGTCTGGATTCTCGACAGCGCAGCCGTCCCGGCAGCTTTACAACCGCTGGTCAATGC GTTGGCCCTGGCTCTGGCCATGTCGGTGGAGCGAGTACAGGAAGGGCGCAGTTGA
Upstream 100 bases:
>100_bases TTATTACTTCAGCTTATCCGCGATGCTGATCGCGATAGCATCTGCATGATGCACAGTACAAATCGAGAGGCAGACGGGAT CAGATGGTAAGGGTTTTGCG
Downstream 100 bases:
>100_bases GAAGGGTAGCTGAACGATACACCGCTGGACGCTGGTAGGGGCGACGCATGCGTCGCCCCTACTGGTACGACAGGAGGCGT AGGGGCACGGCATGCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MVTSSLRQRLGRRLSPLPYYEVIVAEPDRLHLRSYPQANRSHALPSFISGGLLMFFAMVILIAGVLAALQELGFAVAGLS AALAGLLGGLGIQRLVGGYAIATTTNEISLDSDTFVIRQVSRVGRPREQRIARTAIRGLRLRPYRIVTGGLIRRLQPVLV LEMLVGDEVWILDSAAVPAALQPLVNALALALAMSVERVQEGRS
Sequences:
>Translated_204_residues MVTSSLRQRLGRRLSPLPYYEVIVAEPDRLHLRSYPQANRSHALPSFISGGLLMFFAMVILIAGVLAALQELGFAVAGLS AALAGLLGGLGIQRLVGGYAIATTTNEISLDSDTFVIRQVSRVGRPREQRIARTAIRGLRLRPYRIVTGGLIRRLQPVLV LEMLVGDEVWILDSAAVPAALQPLVNALALALAMSVERVQEGRS >Mature_204_residues MVTSSLRQRLGRRLSPLPYYEVIVAEPDRLHLRSYPQANRSHALPSFISGGLLMFFAMVILIAGVLAALQELGFAVAGLS AALAGLLGGLGIQRLVGGYAIATTTNEISLDSDTFVIRQVSRVGRPREQRIARTAIRGLRLRPYRIVTGGLIRRLQPVLV LEMLVGDEVWILDSAAVPAALQPLVNALALALAMSVERVQEGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22075; Mature: 22075
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSSLRQRLGRRLSPLPYYEVIVAEPDRLHLRSYPQANRSHALPSFISGGLLMFFAMVI CCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LIAGVLAALQELGFAVAGLSAALAGLLGGLGIQRLVGGYAIATTTNEISLDSDTFVIRQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHH SRVGRPREQRIARTAIRGLRLRPYRIVTGGLIRRLQPVLVLEMLVGDEVWILDSAAVPAA HHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH LQPLVNALALALAMSVERVQEGRS HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVTSSLRQRLGRRLSPLPYYEVIVAEPDRLHLRSYPQANRSHALPSFISGGLLMFFAMVI CCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LIAGVLAALQELGFAVAGLSAALAGLLGGLGIQRLVGGYAIATTTNEISLDSDTFVIRQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHH SRVGRPREQRIARTAIRGLRLRPYRIVTGGLIRRLQPVLVLEMLVGDEVWILDSAAVPAA HHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH LQPLVNALALALAMSVERVQEGRS HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA