Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222524327

Identifier: 222524327

GI number: 222524327

Start: 1334133

End: 1334483

Strand: Direct

Name: 222524327

Synonym: Chy400_1050

Alternate gene names: NA

Gene position: 1334133-1334483 (Clockwise)

Preceding gene: 222524324

Following gene: 222524328

Centisome position: 25.32

GC content: 58.4

Gene sequence:

>351_bases
ATGCCTGCGTTTCGCATTGACTGGCGCTGGATTGCGCTCTTCGCTATTATTATCATTCTGGCAAACACCCGCAGTCTGCC
CTGGCCGATCACAGCCCTGGCGCTGGCATTTCCAGCCGGTTGGCTGCTGTATCAGGCTGCACAGACCTTTGGCATCTCAT
TGCCCGGCTTGCGCCAATCAAACACCAGGGTCACATACTGGCGTGGCCGTCGGATCGAGACTACCGGCCCTTCGCGCCGT
AGGCCACTGTGGGATCGACACAACCTCGCTTCCGGTTTACTGTACGGCATCGCTGGACTGGCGTTAGCATTAGCCGCATT
GGCCGTGGTTGCCCGCAATCTGGGTGTATAA

Upstream 100 bases:

>100_bases
TGACGATGGCGATTTGCCCGTCAAATAGAGCCGGCAGCGGACATAAACCGACATCCTCACATATATGCTATCATACCCTA
TATCGCGAAAGGAGATGCTC

Downstream 100 bases:

>100_bases
TCGGCCCGCTGAATAGTGTGCGAGGACTGCTGTGATCACATTACCGTTCGGCCTGTTTCGGCGACGACGCTTAACTACCG
ACCAACAGGACAGGCTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MPAFRIDWRWIALFAIIIILANTRSLPWPITALALAFPAGWLLYQAAQTFGISLPGLRQSNTRVTYWRGRRIETTGPSRR
RPLWDRHNLASGLLYGIAGLALALAALAVVARNLGV

Sequences:

>Translated_116_residues
MPAFRIDWRWIALFAIIIILANTRSLPWPITALALAFPAGWLLYQAAQTFGISLPGLRQSNTRVTYWRGRRIETTGPSRR
RPLWDRHNLASGLLYGIAGLALALAALAVVARNLGV
>Mature_115_residues
PAFRIDWRWIALFAIIIILANTRSLPWPITALALAFPAGWLLYQAAQTFGISLPGLRQSNTRVTYWRGRRIETTGPSRRR
PLWDRHNLASGLLYGIAGLALALAALAVVARNLGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12893; Mature: 12762

Theoretical pI: Translated: 12.43; Mature: 12.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFRIDWRWIALFAIIIILANTRSLPWPITALALAFPAGWLLYQAAQTFGISLPGLRQS
CCCEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NTRVTYWRGRRIETTGPSRRRPLWDRHNLASGLLYGIAGLALALAALAVVARNLGV
CCEEEEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAFRIDWRWIALFAIIIILANTRSLPWPITALALAFPAGWLLYQAAQTFGISLPGLRQS
CCEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NTRVTYWRGRRIETTGPSRRRPLWDRHNLASGLLYGIAGLALALAALAVVARNLGV
CCEEEEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA