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The map label for this gene is ybiS [C]

Identifier: 222524074

GI number: 222524074

Start: 996989

End: 998113

Strand: Direct

Name: ybiS [C]

Synonym: Chy400_0790

Alternate gene names: 222524074

Gene position: 996989-998113 (Clockwise)

Preceding gene: 222524071

Following gene: 222524077

Centisome position: 18.92

GC content: 59.91

Gene sequence:

>1125_bases
ATGCGATATACTAGCTGGGTGCTGGCAGTCATACTGGCACTGGCAGTCGTGCCGGCACAAGCCCAGAGCAGTGCGCTCTA
TTTTGTAGCCACCGGTCAGCGGCTCGATGATACCTATGGCTTTCTGTCGGTCTGGCGATCAAGCGAAGGTGCATTAACGC
TCGGTCAGCCTATCAGCGCACCATTGCGCGAAGGCGATCTCACCGTTCAATATTTCGAGCGCGGTCGCCTGGAATTGCAT
CCCGCCTATAACAACGCGGTCTTGCGCGGACGAGTAGGTGCCGAGTATATCGCTGCACTGGGCAAATCATTTCCCCCACC
CTCCGCCGCCGCTCGCGAAAACCCCAATCGTCGCTTTTTCGCCGAGACCGGCTACACCCTTGGCCCACCTTTTCTCGCCT
TCTGGGAAGCTCATGGGGCGACCGAGGTGTTTGGGTTGCCGATCAGTGAACCGCACTGGGAATACGTCGGTGGGGCTTTG
CGGCAAGTGCAGTATTTTGAACGCGCCCGGCTTGAGGTGAATCCACGTCCGGCTACTCCCGAACAGGCGATTCAGATCGG
CGATTTGGGCCGTGCCCTCGCTCGCTTACGTGGCATCGATCTGCGTCCGGTTCCCGCCGGGAATGCGATACCGGTTGATG
CCAGCGGACAACCACAGGCACCGGCACCAGCTCCGCCGGCACCGGCTCCATCACCAACCCCAGCACCAACTGCCCGACCG
GCTGCGGCACCTCCCCCCCAACCGGCACTCCGTAGCGGCAAGCTGATCGTTGTCGATCTTAGCGACCAGTGGTTATACGC
GGTTGAAGGTGATCGAATCATCTTCGATGCACCGGTCTCAACCGGACGTGATGGCTTCAATACACCGGTTGGCACCTTCT
TCATTTACGCCAAAGTTCGCGAACAGACCATGCGCGGTTGCGCCGGTGGTGAATGCTGGGTTGTACCGCGGGTTCCTCAT
GCCATGTACATTGTTGGCGGTGTCGCTCTGCACGGAACATACTGGCACAACCAGTTTGGCACTGGTGTTCGTCGTAGTCA
CGGCTGCGTTAATCTACCGCTCAAAGCGGCGGCATGGCTCTACGAGTGGGCACCGGTCGGTACGCCGGTGGTGGTGCGGC
GGTGA

Upstream 100 bases:

>100_bases
CATCTCAATGGTTGATGATACCCACATTCCCTATGGTACCATGGCTTGCCGTGCCGTATAATACAATCACGATTCGGGCC
TGGAACGAAGCGAGGCGATG

Downstream 100 bases:

>100_bases
TGGCCGGAACCTGTTACAACCAGTCATCACCATAATCAAGCAACAAACCTGACGTACCGCCGATGGTAGGGAAGATCGGT
ACTATGTCCTCACCGGATGG

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: Sortase Family Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; VanW Family Protein; ErfK/YbiS/YcfS/YnhG Superfamily Protein; ErfK/YbiS/YcfS/YnhG Family; Peptidase; N-Acetylmuramoyl-L-Alanine Amidase Domain Protein; Spore Peptidoglycan Hydrolase; Erfk/Ybis/Ycfs/Ynhg Family Protein; SCP-Like Extracellular; Allergen V5/Tpx-1 Family Protein; Peptidase S8 And; ErfK/YbiS/YcfS/YnhG; Glycoside Hydrolase Family; Polysaccharide Deacetylase; Ig Domain Domain Protein; NLP/P60 Protein; Secreted Protein

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRYTSWVLAVILALAVVPAQAQSSALYFVATGQRLDDTYGFLSVWRSSEGALTLGQPISAPLREGDLTVQYFERGRLELH
PAYNNAVLRGRVGAEYIAALGKSFPPPSAAARENPNRRFFAETGYTLGPPFLAFWEAHGATEVFGLPISEPHWEYVGGAL
RQVQYFERARLEVNPRPATPEQAIQIGDLGRALARLRGIDLRPVPAGNAIPVDASGQPQAPAPAPPAPAPSPTPAPTARP
AAAPPPQPALRSGKLIVVDLSDQWLYAVEGDRIIFDAPVSTGRDGFNTPVGTFFIYAKVREQTMRGCAGGECWVVPRVPH
AMYIVGGVALHGTYWHNQFGTGVRRSHGCVNLPLKAAAWLYEWAPVGTPVVVRR

Sequences:

>Translated_374_residues
MRYTSWVLAVILALAVVPAQAQSSALYFVATGQRLDDTYGFLSVWRSSEGALTLGQPISAPLREGDLTVQYFERGRLELH
PAYNNAVLRGRVGAEYIAALGKSFPPPSAAARENPNRRFFAETGYTLGPPFLAFWEAHGATEVFGLPISEPHWEYVGGAL
RQVQYFERARLEVNPRPATPEQAIQIGDLGRALARLRGIDLRPVPAGNAIPVDASGQPQAPAPAPPAPAPSPTPAPTARP
AAAPPPQPALRSGKLIVVDLSDQWLYAVEGDRIIFDAPVSTGRDGFNTPVGTFFIYAKVREQTMRGCAGGECWVVPRVPH
AMYIVGGVALHGTYWHNQFGTGVRRSHGCVNLPLKAAAWLYEWAPVGTPVVVRR
>Mature_374_residues
MRYTSWVLAVILALAVVPAQAQSSALYFVATGQRLDDTYGFLSVWRSSEGALTLGQPISAPLREGDLTVQYFERGRLELH
PAYNNAVLRGRVGAEYIAALGKSFPPPSAAARENPNRRFFAETGYTLGPPFLAFWEAHGATEVFGLPISEPHWEYVGGAL
RQVQYFERARLEVNPRPATPEQAIQIGDLGRALARLRGIDLRPVPAGNAIPVDASGQPQAPAPAPPAPAPSPTPAPTARP
AAAPPPQPALRSGKLIVVDLSDQWLYAVEGDRIIFDAPVSTGRDGFNTPVGTFFIYAKVREQTMRGCAGGECWVVPRVPH
AMYIVGGVALHGTYWHNQFGTGVRRSHGCVNLPLKAAAWLYEWAPVGTPVVVRR

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40458; Mature: 40458

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYTSWVLAVILALAVVPAQAQSSALYFVATGQRLDDTYGFLSVWRSSEGALTLGQPISA
CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCCC
PLREGDLTVQYFERGRLELHPAYNNAVLRGRVGAEYIAALGKSFPPPSAAARENPNRRFF
CCCCCCEEEEEECCCCEEEEECCCCEEEECCCCHHHHHHHCCCCCCCCCHHCCCCCCEEE
AETGYTLGPPFLAFWEAHGATEVFGLPISEPHWEYVGGALRQVQYFERARLEVNPRPATP
ECCCCCCCCCHHEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCCH
EQAIQIGDLGRALARLRGIDLRPVPAGNAIPVDASGQPQAPAPAPPAPAPSPTPAPTARP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAAPPPQPALRSGKLIVVDLSDQWLYAVEGDRIIFDAPVSTGRDGFNTPVGTFFIYAKVR
CCCCCCCHHHHCCCEEEEECCCCEEEEEECCEEEEECCCCCCCCCCCCCCHHEEEEEEHH
EQTMRGCAGGECWVVPRVPHAMYIVGGVALHGTYWHNQFGTGVRRSHGCVNLPLKAAAWL
HHHHHCCCCCCEEEECCCCCEEEEEECEEEEEEEEHHHHCCCCCCCCCEEECCHHHHHHH
YEWAPVGTPVVVRR
HHHCCCCCCEEEEC
>Mature Secondary Structure
MRYTSWVLAVILALAVVPAQAQSSALYFVATGQRLDDTYGFLSVWRSSEGALTLGQPISA
CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCCC
PLREGDLTVQYFERGRLELHPAYNNAVLRGRVGAEYIAALGKSFPPPSAAARENPNRRFF
CCCCCCEEEEEECCCCEEEEECCCCEEEECCCCHHHHHHHCCCCCCCCCHHCCCCCCEEE
AETGYTLGPPFLAFWEAHGATEVFGLPISEPHWEYVGGALRQVQYFERARLEVNPRPATP
ECCCCCCCCCHHEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCCH
EQAIQIGDLGRALARLRGIDLRPVPAGNAIPVDASGQPQAPAPAPPAPAPSPTPAPTARP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAAPPPQPALRSGKLIVVDLSDQWLYAVEGDRIIFDAPVSTGRDGFNTPVGTFFIYAKVR
CCCCCCCHHHHCCCEEEEECCCCEEEEEECCEEEEECCCCCCCCCCCCCCHHEEEEEEHH
EQTMRGCAGGECWVVPRVPHAMYIVGGVALHGTYWHNQFGTGVRRSHGCVNLPLKAAAWL
HHHHHCCCCCCEEEECCCCCEEEEEECEEEEEEEEHHHHCCCCCCCCCEEECCHHHHHHH
YEWAPVGTPVVVRR
HHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA