| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524077
Identifier: 222524077
GI number: 222524077
Start: 1000063
End: 1000911
Strand: Direct
Name: 222524077
Synonym: Chy400_0793
Alternate gene names: NA
Gene position: 1000063-1000911 (Clockwise)
Preceding gene: 222524074
Following gene: 222524081
Centisome position: 18.98
GC content: 60.42
Gene sequence:
>849_bases ATGGGTATGCAGCAGGTTCACCCTTCTCCAACACCGGTTATTCTAATCATCGGCGCTGCCGATACTGGCCGGGCGCCGAT TGCGGTGGCTTTACTACGTCGTCTGGCTCAGGAACGAGGTCACACGTGGCAGATTGCATCGGCTGGCGTTGTTGGTCACG ATGACGATCCGCTTCAGCCGGCAGCTCGCGATGCGCTTGCTGTTATGGGTCTGAGCATCGACGACCACGTGGCCCGGTCG TTAACCGATGATCTGGCGCATACTGCTCACCTGCTCATCGCAGTCGATAGCGGGATTGCCCGTGTACTGCGCAGTCGCTA TCCGCAGGCCACCATTTATTCGCTTGGCGAACTGGCCGGGCGCAGCCGCGATATTCCCGACCCCGCCGGTATGCAGATCG GCGCCTGGCTGCACTACAGTCGTGAGATGGAACAGTTGCTGAAGGCCGGCTTCGAGCGCATGACAACCATACTTAGCGGT AACAATGTGGTTGAAGAGTCACCATCTCTCGCATCACCACCACCGCCGCCACCGCCGCCTCCCTCTGAACGACAAGAAGT CTGCGCCCGTGCCACCCGTCTCCTCGACGCTATCCAGGCGATGCCCGATGTTATCGACTGGCCGGCTGCACGGGGGCGAT TACAGGCGACGCTGGCCGAATTGATTCCACTTGCTACCGAACCGACCGATCTGACAATGCTGTACGTCGAGGCACTCAAT CGCTGGCTCGACCGGCAAACCTCAACACCTTCGGCAGACCGGATTACACGGCTGCGCACAGCTATTGAGCGCGGCCAGCA CCCGGTTGGGCAGAGTGAGGTGGCCGATCTGATGCGCTGGCCTGATTGA
Upstream 100 bases:
>100_bases CTCTTCGGCGTCAGATGACGGCAACCACTGCCATTTCGGACAACCCACAATGACGTTATGCTACAATGCAGCAAGTGTGC AGGTAGATAGGGAATGACAC
Downstream 100 bases:
>100_bases TTACTGGCCACTCCATCCGAAACCACCGATCAGTGCGCAGAGGAGCACAACTGCCCACGGTGGTATGCGCCAGAGGTGTA GCGCAGCAAAAGAACCTAGC
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: Protein-Tyrosine Phosphatase Low Molecular Weight; Low Molecular Weight Phosphotyrosine Protein Phosphatase
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MGMQQVHPSPTPVILIIGAADTGRAPIAVALLRRLAQERGHTWQIASAGVVGHDDDPLQPAARDALAVMGLSIDDHVARS LTDDLAHTAHLLIAVDSGIARVLRSRYPQATIYSLGELAGRSRDIPDPAGMQIGAWLHYSREMEQLLKAGFERMTTILSG NNVVEESPSLASPPPPPPPPPSERQEVCARATRLLDAIQAMPDVIDWPAARGRLQATLAELIPLATEPTDLTMLYVEALN RWLDRQTSTPSADRITRLRTAIERGQHPVGQSEVADLMRWPD
Sequences:
>Translated_282_residues MGMQQVHPSPTPVILIIGAADTGRAPIAVALLRRLAQERGHTWQIASAGVVGHDDDPLQPAARDALAVMGLSIDDHVARS LTDDLAHTAHLLIAVDSGIARVLRSRYPQATIYSLGELAGRSRDIPDPAGMQIGAWLHYSREMEQLLKAGFERMTTILSG NNVVEESPSLASPPPPPPPPPSERQEVCARATRLLDAIQAMPDVIDWPAARGRLQATLAELIPLATEPTDLTMLYVEALN RWLDRQTSTPSADRITRLRTAIERGQHPVGQSEVADLMRWPD >Mature_281_residues GMQQVHPSPTPVILIIGAADTGRAPIAVALLRRLAQERGHTWQIASAGVVGHDDDPLQPAARDALAVMGLSIDDHVARSL TDDLAHTAHLLIAVDSGIARVLRSRYPQATIYSLGELAGRSRDIPDPAGMQIGAWLHYSREMEQLLKAGFERMTTILSGN NVVEESPSLASPPPPPPPPPSERQEVCARATRLLDAIQAMPDVIDWPAARGRLQATLAELIPLATEPTDLTMLYVEALNR WLDRQTSTPSADRITRLRTAIERGQHPVGQSEVADLMRWPD
Specific function: Unknown
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30679; Mature: 30548
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMQQVHPSPTPVILIIGAADTGRAPIAVALLRRLAQERGHTWQIASAGVVGHDDDPLQP CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCH AARDALAVMGLSIDDHVARSLTDDLAHTAHLLIAVDSGIARVLRSRYPQATIYSLGELAG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCHHHHHHHHHHC RSRDIPDPAGMQIGAWLHYSREMEQLLKAGFERMTTILSGNNVVEESPSLASPPPPPPPP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PSERQEVCARATRLLDAIQAMPDVIDWPAARGRLQATLAELIPLATEPTDLTMLYVEALN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RWLDRQTSTPSADRITRLRTAIERGQHPVGQSEVADLMRWPD HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure GMQQVHPSPTPVILIIGAADTGRAPIAVALLRRLAQERGHTWQIASAGVVGHDDDPLQP CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCH AARDALAVMGLSIDDHVARSLTDDLAHTAHLLIAVDSGIARVLRSRYPQATIYSLGELAG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCHHHHHHHHHHC RSRDIPDPAGMQIGAWLHYSREMEQLLKAGFERMTTILSGNNVVEESPSLASPPPPPPPP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PSERQEVCARATRLLDAIQAMPDVIDWPAARGRLQATLAELIPLATEPTDLTMLYVEALN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RWLDRQTSTPSADRITRLRTAIERGQHPVGQSEVADLMRWPD HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA