Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222524036

Identifier: 222524036

GI number: 222524036

Start: 941045

End: 941392

Strand: Direct

Name: 222524036

Synonym: Chy400_0751

Alternate gene names: NA

Gene position: 941045-941392 (Clockwise)

Preceding gene: 222524035

Following gene: 222524037

Centisome position: 17.86

GC content: 54.02

Gene sequence:

>348_bases
ATGCGCCGCATCGTAGAAGATCTCATTCGGGTCGACGGTGTGATTGGCAGTTTGCTGGTCGGCAAAGATGGCCTGGTCGT
AGCCAGCACACTGCTCGATGAAGAAGATGCCGAAATACTGGGAGCAATGTCCGCGGCAGTCTTCGGTGAAATTGATAAAG
CGACCCGCCGACTCGGAGTCGGACATTTAGTTGACTCCATTATTGATGCCAAAGACGGCTCGATCTTACTGCTGGAAGCC
AAAGAGCTAATCCTGGTGGTGATCACACAGCGCACGGTCAATCTCGGCCTGGTCAAGATGGAAATGCGCCGTGCGGCCAA
ACGGATCAGTGAGGCCGTTCCGATCTAA

Upstream 100 bases:

>100_bases
ATTGCCACTTACAGCGTCACATTTGCCGAATAAGTGAGGTATCCGTCTTTCTTATGTAGAGAAAGCAGACTCCGCGATGG
CACCACAAGAAAGGTTTAGC

Downstream 100 bases:

>100_bases
CGCGCCTTCAATGGTAGCTCAGAGCACAGATCGACAGGTAACAACCTGTCGATTTTTGTTTGTCAGCATTTTGTATGTGG
TATACTGACCGCGGGAAACA

Product: Roadblock/LC7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MRRIVEDLIRVDGVIGSLLVGKDGLVVASTLLDEEDAEILGAMSAAVFGEIDKATRRLGVGHLVDSIIDAKDGSILLLEA
KELILVVITQRTVNLGLVKMEMRRAAKRISEAVPI

Sequences:

>Translated_115_residues
MRRIVEDLIRVDGVIGSLLVGKDGLVVASTLLDEEDAEILGAMSAAVFGEIDKATRRLGVGHLVDSIIDAKDGSILLLEA
KELILVVITQRTVNLGLVKMEMRRAAKRISEAVPI
>Mature_115_residues
MRRIVEDLIRVDGVIGSLLVGKDGLVVASTLLDEEDAEILGAMSAAVFGEIDKATRRLGVGHLVDSIIDAKDGSILLLEA
KELILVVITQRTVNLGLVKMEMRRAAKRISEAVPI

Specific function: Unknown

COG id: COG2018

COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0310 and MJ1340 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004942 [H]

Pfam domain/function: PF03259 Robl_LC7 [H]

EC number: NA

Molecular weight: Translated: 12375; Mature: 12375

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIVEDLIRVDGVIGSLLVGKDGLVVASTLLDEEDAEILGAMSAAVFGEIDKATRRLGV
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GHLVDSIIDAKDGSILLLEAKELILVVITQRTVNLGLVKMEMRRAAKRISEAVPI
HHHHHHHHCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRIVEDLIRVDGVIGSLLVGKDGLVVASTLLDEEDAEILGAMSAAVFGEIDKATRRLGV
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GHLVDSIIDAKDGSILLLEAKELILVVITQRTVNLGLVKMEMRRAAKRISEAVPI
HHHHHHHHCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]