| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524036
Identifier: 222524036
GI number: 222524036
Start: 941045
End: 941392
Strand: Direct
Name: 222524036
Synonym: Chy400_0751
Alternate gene names: NA
Gene position: 941045-941392 (Clockwise)
Preceding gene: 222524035
Following gene: 222524037
Centisome position: 17.86
GC content: 54.02
Gene sequence:
>348_bases ATGCGCCGCATCGTAGAAGATCTCATTCGGGTCGACGGTGTGATTGGCAGTTTGCTGGTCGGCAAAGATGGCCTGGTCGT AGCCAGCACACTGCTCGATGAAGAAGATGCCGAAATACTGGGAGCAATGTCCGCGGCAGTCTTCGGTGAAATTGATAAAG CGACCCGCCGACTCGGAGTCGGACATTTAGTTGACTCCATTATTGATGCCAAAGACGGCTCGATCTTACTGCTGGAAGCC AAAGAGCTAATCCTGGTGGTGATCACACAGCGCACGGTCAATCTCGGCCTGGTCAAGATGGAAATGCGCCGTGCGGCCAA ACGGATCAGTGAGGCCGTTCCGATCTAA
Upstream 100 bases:
>100_bases ATTGCCACTTACAGCGTCACATTTGCCGAATAAGTGAGGTATCCGTCTTTCTTATGTAGAGAAAGCAGACTCCGCGATGG CACCACAAGAAAGGTTTAGC
Downstream 100 bases:
>100_bases CGCGCCTTCAATGGTAGCTCAGAGCACAGATCGACAGGTAACAACCTGTCGATTTTTGTTTGTCAGCATTTTGTATGTGG TATACTGACCGCGGGAAACA
Product: Roadblock/LC7 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MRRIVEDLIRVDGVIGSLLVGKDGLVVASTLLDEEDAEILGAMSAAVFGEIDKATRRLGVGHLVDSIIDAKDGSILLLEA KELILVVITQRTVNLGLVKMEMRRAAKRISEAVPI
Sequences:
>Translated_115_residues MRRIVEDLIRVDGVIGSLLVGKDGLVVASTLLDEEDAEILGAMSAAVFGEIDKATRRLGVGHLVDSIIDAKDGSILLLEA KELILVVITQRTVNLGLVKMEMRRAAKRISEAVPI >Mature_115_residues MRRIVEDLIRVDGVIGSLLVGKDGLVVASTLLDEEDAEILGAMSAAVFGEIDKATRRLGVGHLVDSIIDAKDGSILLLEA KELILVVITQRTVNLGLVKMEMRRAAKRISEAVPI
Specific function: Unknown
COG id: COG2018
COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0310 and MJ1340 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004942 [H]
Pfam domain/function: PF03259 Robl_LC7 [H]
EC number: NA
Molecular weight: Translated: 12375; Mature: 12375
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIVEDLIRVDGVIGSLLVGKDGLVVASTLLDEEDAEILGAMSAAVFGEIDKATRRLGV CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GHLVDSIIDAKDGSILLLEAKELILVVITQRTVNLGLVKMEMRRAAKRISEAVPI HHHHHHHHCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRIVEDLIRVDGVIGSLLVGKDGLVVASTLLDEEDAEILGAMSAAVFGEIDKATRRLGV CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GHLVDSIIDAKDGSILLLEAKELILVVITQRTVNLGLVKMEMRRAAKRISEAVPI HHHHHHHHCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]