Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523953

Identifier: 222523953

GI number: 222523953

Start: 828322

End: 828828

Strand: Direct

Name: 222523953

Synonym: Chy400_0668

Alternate gene names: NA

Gene position: 828322-828828 (Clockwise)

Preceding gene: 222523952

Following gene: 222523956

Centisome position: 15.72

GC content: 56.8

Gene sequence:

>507_bases
ATGAGCTATACCCCCACCTACCACCGCCGATCAATTCGCCTGAAGGGGTACGATTATGCGCAGCCTGGAGCCTATTTTGT
GACCATCTGCACGCAGAACCGTGAATGCCTGTTCGGGGAGGTGGTAGATGGAGCAATGCGGTTGAATGCCTTGGGAGAAA
TAGTGCAACGCACGTGGTGTGACCTGCCCAATCACGTGGATGGAGTGGTGTTGGATGCGTTGGTGGTGATGCCAAACCAC
GTCCACGGGATCATTATGATTGTAGGGGCGGGTTCTAAACCCGCCCCGCCGGAATCCGCCTCGACGGAACCCGTGCCAAC
GACACCCGCCCCGCCGGAATTCGCCCCTTCCAGCACGTCTGCTAAACGTCAGGGATTGCCGGAAATCGTTCGTCAATTCA
AAACGTTTTCCGCCCGTCGGATCGCTGCACTGCGATGCACAGGCATGTGTGTGGGTGTCCCCCATGGAAGCACGAACATA
CGACTCATTGGGGTATTGCAAACCTGA

Upstream 100 bases:

>100_bases
TTGAGAGGATGGTATGATGTCTGACACTCCAATCCCTCGACCGGCTAGCTAAGCACAACAAGCAACTACTAAACTACACT
TTACCAAAAGCGAGGCTGAA

Downstream 100 bases:

>100_bases
ACCAGCGTGCGAAAGCGGGATCCATCCTGCATCGGAGACTCCTGCCCCGGCGGGGACGGGTAAGGGTGAGGGCGCGTGTC
GTATAACACTATTGAACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSYTPTYHRRSIRLKGYDYAQPGAYFVTICTQNRECLFGEVVDGAMRLNALGEIVQRTWCDLPNHVDGVVLDALVVMPNH
VHGIIMIVGAGSKPAPPESASTEPVPTTPAPPEFAPSSTSAKRQGLPEIVRQFKTFSARRIAALRCTGMCVGVPHGSTNI
RLIGVLQT

Sequences:

>Translated_168_residues
MSYTPTYHRRSIRLKGYDYAQPGAYFVTICTQNRECLFGEVVDGAMRLNALGEIVQRTWCDLPNHVDGVVLDALVVMPNH
VHGIIMIVGAGSKPAPPESASTEPVPTTPAPPEFAPSSTSAKRQGLPEIVRQFKTFSARRIAALRCTGMCVGVPHGSTNI
RLIGVLQT
>Mature_167_residues
SYTPTYHRRSIRLKGYDYAQPGAYFVTICTQNRECLFGEVVDGAMRLNALGEIVQRTWCDLPNHVDGVVLDALVVMPNHV
HGIIMIVGAGSKPAPPESASTEPVPTTPAPPEFAPSSTSAKRQGLPEIVRQFKTFSARRIAALRCTGMCVGVPHGSTNIR
LIGVLQT

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18217; Mature: 18086

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTPTYHRRSIRLKGYDYAQPGAYFVTICTQNRECLFGEVVDGAMRLNALGEIVQRTWC
CCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHC
DLPNHVDGVVLDALVVMPNHVHGIIMIVGAGSKPAPPESASTEPVPTTPAPPEFAPSSTS
CCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKRQGLPEIVRQFKTFSARRIAALRCTGMCVGVPHGSTNIRLIGVLQT
HHHCCCHHHHHHHHHHHHHHEEEEEECCEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure 
SYTPTYHRRSIRLKGYDYAQPGAYFVTICTQNRECLFGEVVDGAMRLNALGEIVQRTWC
CCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHC
DLPNHVDGVVLDALVVMPNHVHGIIMIVGAGSKPAPPESASTEPVPTTPAPPEFAPSSTS
CCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKRQGLPEIVRQFKTFSARRIAALRCTGMCVGVPHGSTNIRLIGVLQT
HHHCCCHHHHHHHHHHHHHHEEEEEECCEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]