| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523952
Identifier: 222523952
GI number: 222523952
Start: 826297
End: 827421
Strand: Direct
Name: 222523952
Synonym: Chy400_0667
Alternate gene names: NA
Gene position: 826297-827421 (Clockwise)
Preceding gene: 222523951
Following gene: 222523953
Centisome position: 15.68
GC content: 62.49
Gene sequence:
>1125_bases ATGCGTACCGCCCACGAACAGATTCTGGCTGAATTACAACAGCACAACCTGCTACCACCCCCTCCACCGCCGTTACCTCC TGCCCGTGCGCAAGGGATGGCAGCGGCCCGTGCCTACCCGATGCAAGGGGTACTGAAGTATCACGGCCTGAGCGATTGGA CACAACGGATTGCCTTTCTGCCCTCGATCTCGCTAAACAATGCTGCGGCGCATACGACCACCCTGGTTGAGTTTGATCCA GCACTACCGGCCGACACTGCCATAATCGGCGGTATTCCCGCCCAGGGCCGCGAACTTGAGCGCGTGGTTACTGTGCTCGA TGCAGTACGTTCACTGGCCGGCATAAGCAGTCGTGCCCGGGTCATCTCGCGCAATGTACTGCGCACAAAGGTGGCCGGCA AAGGACTGGGCACCAGTGCTTCGGCAGCAGCGGCCCTGGCCTGTGCGGCCATCAGCGCCCTCTTCGGCCCGGAACTGGCC GGCCACACCCGCTTTCTCTCCACCCTTGCCCGCCTGCTGGCCGGTTCGGGGTGTCGCAGTACTGCCGGCGGCCTGGCACT CTGGCTCAGCTACCCCGGCATCTCCCCCACTGAAAGTTATGCCGTGCGGCTCGACCAGCACAACGAACTCGCCGATGTTG CCCTCATCACCGTGCCAATCGACTCGCGGATCGGCCTGAAAACCGAACAGGCTCATCACGATGCGCCAAACAGCATCTTT TTTCGCTCCTGGATGCTGGCCCGCGGCGACGAAGTGCGCGAGTGTATCAGTGCCGTGCGTCGGGGCGACTGGCAGACCAT CGGACAACTGGCCGAACTCGACAGCATGCGCCTGCACGGCGTCACCATGTCTGGTTCGCGTGAGCAGCGAATCATCGGCT GGGAACCGGAAAACATCACCCTCTTTCGGCTTTGCAACGACCTGCGTGCCCGTGGCGTGCCGGTCTACGCCAGCACCGAC ACCGGGCCGACGGTCGTATTCATCACCCACCGCGATCACGCACCGACCGTCGTCGCCGCGATCCACGACCTTGGCCTGAA CCTGGAAACCGTAGTCGCCCCCATCGGAGGACCTGCCCACGTGATTCCGGTTGAAGAAGCATTGTCAGAACTTGAAGGGG TGTAG
Upstream 100 bases:
>100_bases AAACATAGTTGGAAGCAGATTCTCATCTCAACACGGGAAAGCACCAGAAACTATGAACCAGTCTACCATTCCACATTATG TAAGCGATCTCGTGGTACCA
Downstream 100 bases:
>100_bases CGGGTAGGTTGTAGAGAGTAGAACTAATTTCATACCACTCGCTGAATTGGTTGCCTTTCCCGCTCGTCATGCGTGTGTCG CGGCGTTTGGAGTGCGGCAG
Product: GHMP kinase domain-containing protein
Products: ADP; phosphate; isopentenyl diphosphate; CO2
Alternate protein names: Mevalonate Diphosphate Decarboxylase; Mevalonate Pyrophosphate Decarboxylase; GHMP Kinase Domain-Containing Protein; GHMP Kinase; Phosphomevalonate Kinase; GHMP Kinase C Terminal Domain-Containing Protein
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MRTAHEQILAELQQHNLLPPPPPPLPPARAQGMAAARAYPMQGVLKYHGLSDWTQRIAFLPSISLNNAAAHTTTLVEFDP ALPADTAIIGGIPAQGRELERVVTVLDAVRSLAGISSRARVISRNVLRTKVAGKGLGTSASAAAALACAAISALFGPELA GHTRFLSTLARLLAGSGCRSTAGGLALWLSYPGISPTESYAVRLDQHNELADVALITVPIDSRIGLKTEQAHHDAPNSIF FRSWMLARGDEVRECISAVRRGDWQTIGQLAELDSMRLHGVTMSGSREQRIIGWEPENITLFRLCNDLRARGVPVYASTD TGPTVVFITHRDHAPTVVAAIHDLGLNLETVVAPIGGPAHVIPVEEALSELEGV
Sequences:
>Translated_374_residues MRTAHEQILAELQQHNLLPPPPPPLPPARAQGMAAARAYPMQGVLKYHGLSDWTQRIAFLPSISLNNAAAHTTTLVEFDP ALPADTAIIGGIPAQGRELERVVTVLDAVRSLAGISSRARVISRNVLRTKVAGKGLGTSASAAAALACAAISALFGPELA GHTRFLSTLARLLAGSGCRSTAGGLALWLSYPGISPTESYAVRLDQHNELADVALITVPIDSRIGLKTEQAHHDAPNSIF FRSWMLARGDEVRECISAVRRGDWQTIGQLAELDSMRLHGVTMSGSREQRIIGWEPENITLFRLCNDLRARGVPVYASTD TGPTVVFITHRDHAPTVVAAIHDLGLNLETVVAPIGGPAHVIPVEEALSELEGV >Mature_374_residues MRTAHEQILAELQQHNLLPPPPPPLPPARAQGMAAARAYPMQGVLKYHGLSDWTQRIAFLPSISLNNAAAHTTTLVEFDP ALPADTAIIGGIPAQGRELERVVTVLDAVRSLAGISSRARVISRNVLRTKVAGKGLGTSASAAAALACAAISALFGPELA GHTRFLSTLARLLAGSGCRSTAGGLALWLSYPGISPTESYAVRLDQHNELADVALITVPIDSRIGLKTEQAHHDAPNSIF FRSWMLARGDEVRECISAVRRGDWQTIGQLAELDSMRLHGVTMSGSREQRIIGWEPENITLFRLCNDLRARGVPVYASTD TGPTVVFITHRDHAPTVVAAIHDLGLNLETVVAPIGGPAHVIPVEEALSELEGV
Specific function: Unknown
COG id: COG3407
COG function: function code I; Mevalonate pyrophosphate decarboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.33
Molecular weight: Translated: 39914; Mature: 39914
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTAHEQILAELQQHNLLPPPPPPLPPARAQGMAAARAYPMQGVLKYHGLSDWTQRIAFL CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCHHHHHHHCCCHHHHHHHHHC PSISLNNAAAHTTTLVEFDPALPADTAIIGGIPAQGRELERVVTVLDAVRSLAGISSRAR CCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH VISRNVLRTKVAGKGLGTSASAAAALACAAISALFGPELAGHTRFLSTLARLLAGSGCRS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC TAGGLALWLSYPGISPTESYAVRLDQHNELADVALITVPIDSRIGLKTEQAHHDAPNSIF CCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCCHHH FRSWMLARGDEVRECISAVRRGDWQTIGQLAELDSMRLHGVTMSGSREQRIIGWEPENIT HHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCEE LFRLCNDLRARGVPVYASTDTGPTVVFITHRDHAPTVVAAIHDLGLNLETVVAPIGGPAH HHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHEEECCCCCEE VIPVEEALSELEGV EEEHHHHHHHHCCC >Mature Secondary Structure MRTAHEQILAELQQHNLLPPPPPPLPPARAQGMAAARAYPMQGVLKYHGLSDWTQRIAFL CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCHHHHHHHCCCHHHHHHHHHC PSISLNNAAAHTTTLVEFDPALPADTAIIGGIPAQGRELERVVTVLDAVRSLAGISSRAR CCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH VISRNVLRTKVAGKGLGTSASAAAALACAAISALFGPELAGHTRFLSTLARLLAGSGCRS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC TAGGLALWLSYPGISPTESYAVRLDQHNELADVALITVPIDSRIGLKTEQAHHDAPNSIF CCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCCHHH FRSWMLARGDEVRECISAVRRGDWQTIGQLAELDSMRLHGVTMSGSREQRIIGWEPENIT HHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCEE LFRLCNDLRARGVPVYASTDTGPTVVFITHRDHAPTVVAAIHDLGLNLETVVAPIGGPAH HHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHEEECCCCCEE VIPVEEALSELEGV EEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; (R)-5-diphosphomevalonate
Specific reaction: ATP + (R)-5-diphosphomevalonate = ADP + phosphate + isopentenyl diphosphate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA