| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523956
Identifier: 222523956
GI number: 222523956
Start: 832312
End: 832971
Strand: Direct
Name: 222523956
Synonym: Chy400_0671
Alternate gene names: NA
Gene position: 832312-832971 (Clockwise)
Preceding gene: 222523953
Following gene: 222523957
Centisome position: 15.8
GC content: 52.12
Gene sequence:
>660_bases ATGGCACAGATTTTTCCCCGCAATGCCAACCTTCTGTCGCGTTTGAGCATCTTCGCCCTCGTTCTGCTCGTCGTTGAAGG GATTCTTATTCTCGGCGTTTACTTTCGGTCAAATTATTTCCGACAGGTAAACGTGGCCATTGAGCAGCCGGTGGCATTCA GTCATCAACTGCATGTGAATGTCGTCGGGATTGACTGTCGGTATTGCCATACCTCAGTTGATCAGTCGTACTTTGCCAAC ATTCCGGCCACCGAAACCTGTATGACCTGCCACTCCCAGATCAAGACCTACAGCCCGCTCCTGGAAAAGGTGCGCGAGAG CTATGCCACCGGTAAGCCGATTGAATGGGTGAAGGTGTACGACCTGCCGAATTTTGTCTACTTCAACCATTCGATCCACG TCAACAAGGGTATTGGTTGCTCGACCTGCCACGGTCAGGTGAACAATATGCCGGTGGTCTGGCAGCAACAGGCCCTGTAT ATGGGGTGGTGTCTGAATTGCCACCGCAATCCAGAGCTGTACGTGCGACCGCGCGAAGAGGTGTACAACATGGATTATGT ACCACCATCCAACCAGTTGGAGATCGGTCGCCAGCTTGTAGCGGAATACGGCATCATGCCACCTGATCAGTTGACCAATT GTTACGTATGTCACCGCTGA
Upstream 100 bases:
>100_bases ATAATCCGGCGTCCAGGTATTTGACGCAAAAGCAAAACGGTTCTATAATAGCTGAACAGGTGACACCGTGCAGTTCACTT CCTGGATAGGGTAATGCAGC
Downstream 100 bases:
>100_bases TTCGCCAGGTTGATCGACCGGTGTAATCTACGTGCCCGCTGGAATCGCTATCAACGGTATTGGTAGAAGATTATGACACA GCAACAACCCGATCTCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C; Cytochrome C Family Protein; Cytochrome C Class I; Cytochrome C Domain-Containing Protein; Cytochrome C Mono- And Diheme Variant; Molybdopterin Oxidoreductase Subunit; Multiheme Cytochrome Domain Protein; Lipoprotein Cytochrome C
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MAQIFPRNANLLSRLSIFALVLLVVEGILILGVYFRSNYFRQVNVAIEQPVAFSHQLHVNVVGIDCRYCHTSVDQSYFAN IPATETCMTCHSQIKTYSPLLEKVRESYATGKPIEWVKVYDLPNFVYFNHSIHVNKGIGCSTCHGQVNNMPVVWQQQALY MGWCLNCHRNPELYVRPREEVYNMDYVPPSNQLEIGRQLVAEYGIMPPDQLTNCYVCHR
Sequences:
>Translated_219_residues MAQIFPRNANLLSRLSIFALVLLVVEGILILGVYFRSNYFRQVNVAIEQPVAFSHQLHVNVVGIDCRYCHTSVDQSYFAN IPATETCMTCHSQIKTYSPLLEKVRESYATGKPIEWVKVYDLPNFVYFNHSIHVNKGIGCSTCHGQVNNMPVVWQQQALY MGWCLNCHRNPELYVRPREEVYNMDYVPPSNQLEIGRQLVAEYGIMPPDQLTNCYVCHR >Mature_218_residues AQIFPRNANLLSRLSIFALVLLVVEGILILGVYFRSNYFRQVNVAIEQPVAFSHQLHVNVVGIDCRYCHTSVDQSYFANI PATETCMTCHSQIKTYSPLLEKVRESYATGKPIEWVKVYDLPNFVYFNHSIHVNKGIGCSTCHGQVNNMPVVWQQQALYM GWCLNCHRNPELYVRPREEVYNMDYVPPSNQLEIGRQLVAEYGIMPPDQLTNCYVCHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25222; Mature: 25091
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQIFPRNANLLSRLSIFALVLLVVEGILILGVYFRSNYFRQVNVAIEQPVAFSHQLHVN CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEECEEEEEE VVGIDCRYCHTSVDQSYFANIPATETCMTCHSQIKTYSPLLEKVRESYATGKPIEWVKVY EEEEEEEEHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE DLPNFVYFNHSIHVNKGIGCSTCHGQVNNMPVVWQQQALYMGWCLNCHRNPELYVRPREE ECCCEEEEECEEEEECCCCCCCCCCCCCCCCEEEHHHHHEEHHEECCCCCCCEEECCHHH VYNMDYVPPSNQLEIGRQLVAEYGIMPPDQLTNCYVCHR HCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCEEEECC >Mature Secondary Structure AQIFPRNANLLSRLSIFALVLLVVEGILILGVYFRSNYFRQVNVAIEQPVAFSHQLHVN CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEECEEEEEE VVGIDCRYCHTSVDQSYFANIPATETCMTCHSQIKTYSPLLEKVRESYATGKPIEWVKVY EEEEEEEEHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE DLPNFVYFNHSIHVNKGIGCSTCHGQVNNMPVVWQQQALYMGWCLNCHRNPELYVRPREE ECCCEEEEECEEEEECCCCCCCCCCCCCCCCEEEHHHHHEEHHEECCCCCCCEEECCHHH VYNMDYVPPSNQLEIGRQLVAEYGIMPPDQLTNCYVCHR HCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA