| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yojG [H]
Identifier: 222152089
GI number: 222152089
Start: 1980100
End: 1980762
Strand: Direct
Name: yojG [H]
Synonym: MCCL_1846
Alternate gene names: 222152089
Gene position: 1980100-1980762 (Clockwise)
Preceding gene: 222152088
Following gene: 222152090
Centisome position: 94.19
GC content: 40.72
Gene sequence:
>663_bases ATGGAACAAGAAAGACAAGTGCTCGTAATCTTCCCTCATCCGGATGATGAAGCATTCGGTGTATCAGGTACGATTATGAA ACATATAGATGCAGGTACGCCAGTTACTTATGCATGCTTAACACTAGGTCAAATGGGGAGAAACCTAGGTAATCCGCCAT TTGCAACCCGTGAATCATTACCAAAGATTCGTGAGAAAGAATTAGAAGAAGCTTGTCGCGTGATGGGAATTACCGACTTA CGCAAAATGGGTTACCGTGATAAAACATTAGAATTTGAATTATTAGACGATTTAGTCGACATGGTAACAGGATTAATCAA TGAATTGAATCCTTCAAAGATCATTTCGTTCTATCCCGGTTACTCTGTACATCCAGACCACGAAGCCACAGCAGATGCAG TAGTTGAAGCGGTGCGTCGCATGGAAGGTGAAAAGCCTAGATTACATTTAGTCGCTTTCAGTAATGATACTGTTGAGAAT ATCGGAGAACCGAATGTTGAATATGATATTACGGGATATGAGGAAAGAAAGATGAATGTACTAGGTGCACATGCATCGCA AACAGGACCAATGCTAGAAAATTTAGCGGCAAATACACAAGAAGCAGAAGCGGCAAAAGATATGTGGCTTCGAAAAGAAC GCTTCTACGAATACGAAGTTTAA
Upstream 100 bases:
>100_bases GAAGGCCGTTTTTTAATGGCTGGTTTAAACTATCAAGGTCAGCTTGCTGCAGCTCTTGAAATAAGCGAAACGCCATTTGA GGTTTAAGGGGGAAATGATG
Downstream 100 bases:
>100_bases TTAGGAGAATGAGATGGATCAATATAATTTAAATACACGTGAAGGTCGATGGAAACATTTCGGTTCGGTAGATCCTATTA AAGGGACTAAACCTACTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MEQERQVLVIFPHPDDEAFGVSGTIMKHIDAGTPVTYACLTLGQMGRNLGNPPFATRESLPKIREKELEEACRVMGITDL RKMGYRDKTLEFELLDDLVDMVTGLINELNPSKIISFYPGYSVHPDHEATADAVVEAVRRMEGEKPRLHLVAFSNDTVEN IGEPNVEYDITGYEERKMNVLGAHASQTGPMLENLAANTQEAEAAKDMWLRKERFYEYEV
Sequences:
>Translated_220_residues MEQERQVLVIFPHPDDEAFGVSGTIMKHIDAGTPVTYACLTLGQMGRNLGNPPFATRESLPKIREKELEEACRVMGITDL RKMGYRDKTLEFELLDDLVDMVTGLINELNPSKIISFYPGYSVHPDHEATADAVVEAVRRMEGEKPRLHLVAFSNDTVEN IGEPNVEYDITGYEERKMNVLGAHASQTGPMLENLAANTQEAEAAKDMWLRKERFYEYEV >Mature_220_residues MEQERQVLVIFPHPDDEAFGVSGTIMKHIDAGTPVTYACLTLGQMGRNLGNPPFATRESLPKIREKELEEACRVMGITDL RKMGYRDKTLEFELLDDLVDMVTGLINELNPSKIISFYPGYSVHPDHEATADAVVEAVRRMEGEKPRLHLVAFSNDTVEN IGEPNVEYDITGYEERKMNVLGAHASQTGPMLENLAANTQEAEAAKDMWLRKERFYEYEV
Specific function: Unknown
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PIGL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003737 [H]
Pfam domain/function: PF02585 PIG-L [H]
EC number: NA
Molecular weight: Translated: 24849; Mature: 24849
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQERQVLVIFPHPDDEAFGVSGTIMKHIDAGTPVTYACLTLGQMGRNLGNPPFATRESL CCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH PKIREKELEEACRVMGITDLRKMGYRDKTLEFELLDDLVDMVTGLINELNPSKIISFYPG HHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEECCC YSVHPDHEATADAVVEAVRRMEGEKPRLHLVAFSNDTVENIGEPNVEYDITGYEERKMNV CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCCCCEEEECCCHHHHHHH LGAHASQTGPMLENLAANTQEAEAAKDMWLRKERFYEYEV HCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEQERQVLVIFPHPDDEAFGVSGTIMKHIDAGTPVTYACLTLGQMGRNLGNPPFATRESL CCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH PKIREKELEEACRVMGITDLRKMGYRDKTLEFELLDDLVDMVTGLINELNPSKIISFYPG HHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEECCC YSVHPDHEATADAVVEAVRRMEGEKPRLHLVAFSNDTVENIGEPNVEYDITGYEERKMNV CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCCCCEEEECCCHHHHHHH LGAHASQTGPMLENLAANTQEAEAAKDMWLRKERFYEYEV HCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]