| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yojF [H]
Identifier: 222152088
GI number: 222152088
Start: 1979724
End: 1980086
Strand: Direct
Name: yojF [H]
Synonym: MCCL_1845
Alternate gene names: 222152088
Gene position: 1979724-1980086 (Clockwise)
Preceding gene: 222152087
Following gene: 222152089
Centisome position: 94.17
GC content: 36.64
Gene sequence:
>363_bases ATGAAGATGGAATTAATCGAAAAACAAAAAGTACAGGAGCTATTGGATCAATTTCAAGAGAAACCTGTCTATTTACATGT AGAAACAACGAATGGTGCTTATGCAAGTCACTTTGATCAAAAAGTGTTCAATGCAGGTACATTCTTACGTAATATTCAAG TATCATATATTCAAGGGATTATTACTGGCGGCGGAAAGGAGCCTTTCCGTGTTGGTTTAAAATTGAATGGCGGTTGGATT TACGTGCAAGGTTTAACACATTTTGAAATTGATGAAGAAGGCCGTTTTTTAATGGCTGGTTTAAACTATCAAGGTCAGCT TGCTGCAGCTCTTGAAATAAGCGAAACGCCATTTGAGGTTTAA
Upstream 100 bases:
>100_bases CACTCAGTTTTTTTTGCGCCTTTTTTTCTTATACAAGCTCAAAAGGTATAATTTTTACAATTTATTTAGTAAAATAGTCT AGTATAAACTTTGAGGAGTA
Downstream 100 bases:
>100_bases GGGGGAAATGATGATGGAACAAGAAAGACAAGTGCTCGTAATCTTCCCTCATCCGGATGATGAAGCATTCGGTGTATCAG GTACGATTATGAAACATATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MKMELIEKQKVQELLDQFQEKPVYLHVETTNGAYASHFDQKVFNAGTFLRNIQVSYIQGIITGGGKEPFRVGLKLNGGWI YVQGLTHFEIDEEGRFLMAGLNYQGQLAAALEISETPFEV
Sequences:
>Translated_120_residues MKMELIEKQKVQELLDQFQEKPVYLHVETTNGAYASHFDQKVFNAGTFLRNIQVSYIQGIITGGGKEPFRVGLKLNGGWI YVQGLTHFEIDEEGRFLMAGLNYQGQLAAALEISETPFEV >Mature_120_residues MKMELIEKQKVQELLDQFQEKPVYLHVETTNGAYASHFDQKVFNAGTFLRNIQVSYIQGIITGGGKEPFRVGLKLNGGWI YVQGLTHFEIDEEGRFLMAGLNYQGQLAAALEISETPFEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014934 [H]
Pfam domain/function: PF08830 DUF1806 [H]
EC number: NA
Molecular weight: Translated: 13570; Mature: 13570
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMELIEKQKVQELLDQFQEKPVYLHVETTNGAYASHFDQKVFNAGTFLRNIQVSYIQGI CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHEEEEHEEEE ITGGGKEPFRVGLKLNGGWIYVQGLTHFEIDEEGRFLMAGLNYQGQLAAALEISETPFEV EECCCCCCEEEEEEECCCEEEEECCEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MKMELIEKQKVQELLDQFQEKPVYLHVETTNGAYASHFDQKVFNAGTFLRNIQVSYIQGI CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHEEEEHEEEE ITGGGKEPFRVGLKLNGGWIYVQGLTHFEIDEEGRFLMAGLNYQGQLAAALEISETPFEV EECCCCCCEEEEEEECCCEEEEECCEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]