Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is yojF [H]

Identifier: 222152088

GI number: 222152088

Start: 1979724

End: 1980086

Strand: Direct

Name: yojF [H]

Synonym: MCCL_1845

Alternate gene names: 222152088

Gene position: 1979724-1980086 (Clockwise)

Preceding gene: 222152087

Following gene: 222152089

Centisome position: 94.17

GC content: 36.64

Gene sequence:

>363_bases
ATGAAGATGGAATTAATCGAAAAACAAAAAGTACAGGAGCTATTGGATCAATTTCAAGAGAAACCTGTCTATTTACATGT
AGAAACAACGAATGGTGCTTATGCAAGTCACTTTGATCAAAAAGTGTTCAATGCAGGTACATTCTTACGTAATATTCAAG
TATCATATATTCAAGGGATTATTACTGGCGGCGGAAAGGAGCCTTTCCGTGTTGGTTTAAAATTGAATGGCGGTTGGATT
TACGTGCAAGGTTTAACACATTTTGAAATTGATGAAGAAGGCCGTTTTTTAATGGCTGGTTTAAACTATCAAGGTCAGCT
TGCTGCAGCTCTTGAAATAAGCGAAACGCCATTTGAGGTTTAA

Upstream 100 bases:

>100_bases
CACTCAGTTTTTTTTGCGCCTTTTTTTCTTATACAAGCTCAAAAGGTATAATTTTTACAATTTATTTAGTAAAATAGTCT
AGTATAAACTTTGAGGAGTA

Downstream 100 bases:

>100_bases
GGGGGAAATGATGATGGAACAAGAAAGACAAGTGCTCGTAATCTTCCCTCATCCGGATGATGAAGCATTCGGTGTATCAG
GTACGATTATGAAACATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKMELIEKQKVQELLDQFQEKPVYLHVETTNGAYASHFDQKVFNAGTFLRNIQVSYIQGIITGGGKEPFRVGLKLNGGWI
YVQGLTHFEIDEEGRFLMAGLNYQGQLAAALEISETPFEV

Sequences:

>Translated_120_residues
MKMELIEKQKVQELLDQFQEKPVYLHVETTNGAYASHFDQKVFNAGTFLRNIQVSYIQGIITGGGKEPFRVGLKLNGGWI
YVQGLTHFEIDEEGRFLMAGLNYQGQLAAALEISETPFEV
>Mature_120_residues
MKMELIEKQKVQELLDQFQEKPVYLHVETTNGAYASHFDQKVFNAGTFLRNIQVSYIQGIITGGGKEPFRVGLKLNGGWI
YVQGLTHFEIDEEGRFLMAGLNYQGQLAAALEISETPFEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014934 [H]

Pfam domain/function: PF08830 DUF1806 [H]

EC number: NA

Molecular weight: Translated: 13570; Mature: 13570

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMELIEKQKVQELLDQFQEKPVYLHVETTNGAYASHFDQKVFNAGTFLRNIQVSYIQGI
CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHEEEEHEEEE
ITGGGKEPFRVGLKLNGGWIYVQGLTHFEIDEEGRFLMAGLNYQGQLAAALEISETPFEV
EECCCCCCEEEEEEECCCEEEEECCEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MKMELIEKQKVQELLDQFQEKPVYLHVETTNGAYASHFDQKVFNAGTFLRNIQVSYIQGI
CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHEEEEHEEEE
ITGGGKEPFRVGLKLNGGWIYVQGLTHFEIDEEGRFLMAGLNYQGQLAAALEISETPFEV
EECCCCCCEEEEEEECCCEEEEECCEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]