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The map label for this gene is ydiF [H]

Identifier: 222151965

GI number: 222151965

Start: 1856931

End: 1858850

Strand: Direct

Name: ydiF [H]

Synonym: MCCL_1722

Alternate gene names: 222151965

Gene position: 1856931-1858850 (Clockwise)

Preceding gene: 222151960

Following gene: 222151985

Centisome position: 88.33

GC content: 38.65

Gene sequence:

>1920_bases
GTGATACTATTACAAGCTAGTAATTTAACTAAATCCTACTCAGGTGAAAATATATTTTCAAATGTAAAATTTGAAGTCAA
GTCCAATGATCGTATTGCGATTGTCGGTAGAAACGGTGCAGGGAAGACAACATTAATGAAGATTCTTGCAGGAACTGAAG
ACTATGATTCAGGTCATCTGTCTATTGCTAAACATGTGAATGTAGGTTACTTAACACAACAGATGACTTTAAATGCTGAA
GGTACCGTATATGAGGCTATGAAGAAACCTTTCTTACATTTAGAGCGCATGCAGCAAGAGTTAAACAACATTGCTACCTA
TTTAAGTGAGCATAGCGCAGATGCACATAGCGATGCATATCAAGAGAAATTAGCAGAATATGAAAGACTACAGCAAAAGT
TTGAATCACAAGATGGCTATCTATATGAAACAAAGATCAAGTCTGTCTTAATGGGATTAAGCTTCACAGAAGAAGACTTT
CATAAAAAAATAGATCGTTTCTCTGGTGGACAGAAGACACGTCTCGCACTCGCTGAGATGCTCCTTCATAATCCCGACTT
ATTATTACTTGATGAGCCGACGAACCACCTGGATATGGATACAACTGCATGGCTGGAAAATTACTTAACAACATACAGTG
GTGCCATCGTCATTATTTCACATGACCGTTATTTCTTAGATAAGGTTGTGAATACCGTATATGATGTCGCACTCGGACAA
GTAACGAAATATGCTGGTAACTATTCCAAATTTATTGCACTGCGTGATCAGTTCTATGATAAGATGCAGGCCGAATATGA
TCGTCAGCAAGCTGAAATCAAACGACTCGAAACATTCGTACAAAAGAATATTACCCGTGCATCAACGAGCGGGATGGCAA
AGTCTCGCCGTAAAGTATTAGAGAAGATGACAAAGATCGATATGCCAAAGCAAGATGACCACTCAATGAACTTGCGCTTT
AATATCGATAAAGAAACAGGAAATGACGTGCTGCGTTGTACAGAGCTTGCAATTGGCTATACAACGCCTCTTGCAACCAA
TATCAACTTTGATGTATCTAAACAAGACGCAATCGCATTTATCGGACCGAATGGAATCGGAAAGACAACGCTCATCAAAA
CAATCGCTAAACTATTAAAACCTCTTGACGGAGAGGTTCATTACGGTGCAAACTTATCTATCGGTTATTACGATCAGAAA
CAAGCTGAATTCTCATCAAACAATACTGTATTAGAAGAATTGTGGCAGTACTATCCTACAATGCCGGAAAAAGAAATCAG
AACTGTGCTCGGACGTTTCTTATTCGTACAAGATGACGTCAAGAAAATCATCAATGATTTATCCGGTGGCGAAAAAGCTC
GACTCCAGCTGGCGAAGCTAAGCCTTGAAAATCATAACGTGCTCATACTCGATGAGCCAACCAACCATCTAGACATCGAT
GCGAAAGAAGTATTAGAAGATGCCCTTATCCATTATCCAGGTACTTTGCTATTTGTCAGTCATGATCGCTATTTTATCAA
TAAACTCGCGACAAAAGTATTCCATATGGATAAAGATGGCGGGCGTATGTTCCTCGGCGATTACTCTTATTTCATCGAAA
AGGAAGAAGAACGTATGGCCATACTTGCTCATCAAGCAGAAGAGCAAACGCAATCCGTAAATAAAGAGAAAGACTATGAT
GCATTTAAAGCGAACCGAAAAGAAACAAGAAAACTCGAGCGACAAAAAGAGAAGCTAGAAACACAAATTGAAATAAACGA
AGAGCGTATCAATGAAATTGAACTCGAACTTACAAAGCCAGAAGTATTCAGTGATATCGAAAAGGCAAACACATTCAATG
AAGAACTTATCCGACTCAACAATGAAAATGAAAAATTACTTGAAGAATGGTCAGACATCGAAATGGCATTAGAAGGATAA

Upstream 100 bases:

>100_bases
TAACATCTATACTAATAAATGACTATGTGAAATTATGAATTAACGATAAATGATTCCCACTGATATCACACTAATGTACA
ATAAAAGAGAGGTGAGCAAA

Downstream 100 bases:

>100_bases
TTTTTCATTAATACACGCTATTTTCTGAAAATAGATATTCACAAAGTTATACACAATAAAAATGTTATATTATAAGTAAT
CCACAAAGTTATTAGACTTA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MILLQASNLTKSYSGENIFSNVKFEVKSNDRIAIVGRNGAGKTTLMKILAGTEDYDSGHLSIAKHVNVGYLTQQMTLNAE
GTVYEAMKKPFLHLERMQQELNNIATYLSEHSADAHSDAYQEKLAEYERLQQKFESQDGYLYETKIKSVLMGLSFTEEDF
HKKIDRFSGGQKTRLALAEMLLHNPDLLLLDEPTNHLDMDTTAWLENYLTTYSGAIVIISHDRYFLDKVVNTVYDVALGQ
VTKYAGNYSKFIALRDQFYDKMQAEYDRQQAEIKRLETFVQKNITRASTSGMAKSRRKVLEKMTKIDMPKQDDHSMNLRF
NIDKETGNDVLRCTELAIGYTTPLATNINFDVSKQDAIAFIGPNGIGKTTLIKTIAKLLKPLDGEVHYGANLSIGYYDQK
QAEFSSNNTVLEELWQYYPTMPEKEIRTVLGRFLFVQDDVKKIINDLSGGEKARLQLAKLSLENHNVLILDEPTNHLDID
AKEVLEDALIHYPGTLLFVSHDRYFINKLATKVFHMDKDGGRMFLGDYSYFIEKEEERMAILAHQAEEQTQSVNKEKDYD
AFKANRKETRKLERQKEKLETQIEINEERINEIELELTKPEVFSDIEKANTFNEELIRLNNENEKLLEEWSDIEMALEG

Sequences:

>Translated_639_residues
MILLQASNLTKSYSGENIFSNVKFEVKSNDRIAIVGRNGAGKTTLMKILAGTEDYDSGHLSIAKHVNVGYLTQQMTLNAE
GTVYEAMKKPFLHLERMQQELNNIATYLSEHSADAHSDAYQEKLAEYERLQQKFESQDGYLYETKIKSVLMGLSFTEEDF
HKKIDRFSGGQKTRLALAEMLLHNPDLLLLDEPTNHLDMDTTAWLENYLTTYSGAIVIISHDRYFLDKVVNTVYDVALGQ
VTKYAGNYSKFIALRDQFYDKMQAEYDRQQAEIKRLETFVQKNITRASTSGMAKSRRKVLEKMTKIDMPKQDDHSMNLRF
NIDKETGNDVLRCTELAIGYTTPLATNINFDVSKQDAIAFIGPNGIGKTTLIKTIAKLLKPLDGEVHYGANLSIGYYDQK
QAEFSSNNTVLEELWQYYPTMPEKEIRTVLGRFLFVQDDVKKIINDLSGGEKARLQLAKLSLENHNVLILDEPTNHLDID
AKEVLEDALIHYPGTLLFVSHDRYFINKLATKVFHMDKDGGRMFLGDYSYFIEKEEERMAILAHQAEEQTQSVNKEKDYD
AFKANRKETRKLERQKEKLETQIEINEERINEIELELTKPEVFSDIEKANTFNEELIRLNNENEKLLEEWSDIEMALEG
>Mature_639_residues
MILLQASNLTKSYSGENIFSNVKFEVKSNDRIAIVGRNGAGKTTLMKILAGTEDYDSGHLSIAKHVNVGYLTQQMTLNAE
GTVYEAMKKPFLHLERMQQELNNIATYLSEHSADAHSDAYQEKLAEYERLQQKFESQDGYLYETKIKSVLMGLSFTEEDF
HKKIDRFSGGQKTRLALAEMLLHNPDLLLLDEPTNHLDMDTTAWLENYLTTYSGAIVIISHDRYFLDKVVNTVYDVALGQ
VTKYAGNYSKFIALRDQFYDKMQAEYDRQQAEIKRLETFVQKNITRASTSGMAKSRRKVLEKMTKIDMPKQDDHSMNLRF
NIDKETGNDVLRCTELAIGYTTPLATNINFDVSKQDAIAFIGPNGIGKTTLIKTIAKLLKPLDGEVHYGANLSIGYYDQK
QAEFSSNNTVLEELWQYYPTMPEKEIRTVLGRFLFVQDDVKKIINDLSGGEKARLQLAKLSLENHNVLILDEPTNHLDID
AKEVLEDALIHYPGTLLFVSHDRYFINKLATKVFHMDKDGGRMFLGDYSYFIEKEEERMAILAHQAEEQTQSVNKEKDYD
AFKANRKETRKLERQKEKLETQIEINEERINEIELELTKPEVFSDIEKANTFNEELIRLNNENEKLLEEWSDIEMALEG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI27881506, Length=555, Percent_Identity=30.2702702702703, Blast_Score=252, Evalue=6e-67,
Organism=Homo sapiens, GI10947137, Length=555, Percent_Identity=30.2702702702703, Blast_Score=252, Evalue=9e-67,
Organism=Homo sapiens, GI148612853, Length=521, Percent_Identity=30.1343570057582, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI10947135, Length=530, Percent_Identity=29.4339622641509, Blast_Score=209, Evalue=7e-54,
Organism=Homo sapiens, GI69354671, Length=530, Percent_Identity=29.4339622641509, Blast_Score=208, Evalue=1e-53,
Organism=Escherichia coli, GI1787041, Length=533, Percent_Identity=35.4596622889306, Blast_Score=318, Evalue=6e-88,
Organism=Escherichia coli, GI1789751, Length=594, Percent_Identity=30.8080808080808, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI2367384, Length=538, Percent_Identity=32.5278810408922, Blast_Score=282, Evalue=5e-77,
Organism=Escherichia coli, GI1787182, Length=649, Percent_Identity=30.6625577812018, Blast_Score=266, Evalue=3e-72,
Organism=Escherichia coli, GI1788165, Length=167, Percent_Identity=28.1437125748503, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI145693107, Length=547, Percent_Identity=20.4753199268739, Blast_Score=69, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17555318, Length=538, Percent_Identity=29.368029739777, Blast_Score=246, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI17553372, Length=513, Percent_Identity=31.7738791423002, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17559834, Length=546, Percent_Identity=28.021978021978, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17555800, Length=507, Percent_Identity=22.6824457593688, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI212646699, Length=302, Percent_Identity=25.8278145695364, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=163, Percent_Identity=30.0613496932515, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=163, Percent_Identity=29.4478527607362, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=163, Percent_Identity=29.4478527607362, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=30.4267161410019, Blast_Score=245, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6320874, Length=520, Percent_Identity=30.5769230769231, Blast_Score=238, Evalue=3e-63,
Organism=Saccharomyces cerevisiae, GI6323278, Length=389, Percent_Identity=30.5912596401028, Blast_Score=140, Evalue=6e-34,
Organism=Saccharomyces cerevisiae, GI6324314, Length=389, Percent_Identity=28.7917737789203, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=259, Percent_Identity=30.5019305019305, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24642252, Length=525, Percent_Identity=29.9047619047619, Blast_Score=246, Evalue=4e-65,
Organism=Drosophila melanogaster, GI18859989, Length=525, Percent_Identity=29.9047619047619, Blast_Score=246, Evalue=4e-65,
Organism=Drosophila melanogaster, GI24666836, Length=518, Percent_Identity=30.6949806949807, Blast_Score=239, Evalue=4e-63,
Organism=Drosophila melanogaster, GI24641342, Length=554, Percent_Identity=28.3393501805054, Blast_Score=237, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 73483; Mature: 73483

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLQASNLTKSYSGENIFSNVKFEVKSNDRIAIVGRNGAGKTTLMKILAGTEDYDSGHL
CEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCE
SIAKHVNVGYLTQQMTLNAEGTVYEAMKKPFLHLERMQQELNNIATYLSEHSADAHSDAY
EEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QEKLAEYERLQQKFESQDGYLYETKIKSVLMGLSFTEEDFHKKIDRFSGGQKTRLALAEM
HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
LLHNPDLLLLDEPTNHLDMDTTAWLENYLTTYSGAIVIISHDRYFLDKVVNTVYDVALGQ
HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHH
VTKYAGNYSKFIALRDQFYDKMQAEYDRQQAEIKRLETFVQKNITRASTSGMAKSRRKVL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKMTKIDMPKQDDHSMNLRFNIDKETGNDVLRCTELAIGYTTPLATNINFDVSKQDAIAF
HHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHEECCCCEECCCCCCCCCCCEEE
IGPNGIGKTTLIKTIAKLLKPLDGEVHYGANLSIGYYDQKQAEFSSNNTVLEELWQYYPT
ECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEECCCCCHHHHCCCCCHHHHHHHHHCCC
MPEKEIRTVLGRFLFVQDDVKKIINDLSGGEKARLQLAKLSLENHNVLILDEPTNHLDID
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEECCCCEEEEECCCCCCCCC
AKEVLEDALIHYPGTLLFVSHDRYFINKLATKVFHMDKDGGRMFLGDYSYFIEKEEERMA
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHEECCCCCEEEEECHHHHHCCCHHHHH
ILAHQAEEQTQSVNKEKDYDAFKANRKETRKLERQKEKLETQIEINEERINEIELELTKP
HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHEEECHHHCCEEEEEECCC
EVFSDIEKANTFNEELIRLNNENEKLLEEWSDIEMALEG
HHHHHHHHHCCCCHHHHEECCCCHHHHHHHHCHHEEECC
>Mature Secondary Structure
MILLQASNLTKSYSGENIFSNVKFEVKSNDRIAIVGRNGAGKTTLMKILAGTEDYDSGHL
CEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCE
SIAKHVNVGYLTQQMTLNAEGTVYEAMKKPFLHLERMQQELNNIATYLSEHSADAHSDAY
EEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QEKLAEYERLQQKFESQDGYLYETKIKSVLMGLSFTEEDFHKKIDRFSGGQKTRLALAEM
HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
LLHNPDLLLLDEPTNHLDMDTTAWLENYLTTYSGAIVIISHDRYFLDKVVNTVYDVALGQ
HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHH
VTKYAGNYSKFIALRDQFYDKMQAEYDRQQAEIKRLETFVQKNITRASTSGMAKSRRKVL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKMTKIDMPKQDDHSMNLRFNIDKETGNDVLRCTELAIGYTTPLATNINFDVSKQDAIAF
HHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHEECCCCEECCCCCCCCCCCEEE
IGPNGIGKTTLIKTIAKLLKPLDGEVHYGANLSIGYYDQKQAEFSSNNTVLEELWQYYPT
ECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEECCCCCHHHHCCCCCHHHHHHHHHCCC
MPEKEIRTVLGRFLFVQDDVKKIINDLSGGEKARLQLAKLSLENHNVLILDEPTNHLDID
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEECCCCEEEEECCCCCCCCC
AKEVLEDALIHYPGTLLFVSHDRYFINKLATKVFHMDKDGGRMFLGDYSYFIEKEEERMA
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHEECCCCCEEEEECHHHHHCCCHHHHH
ILAHQAEEQTQSVNKEKDYDAFKANRKETRKLERQKEKLETQIEINEERINEIELELTKP
HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHEEECHHHCCEEEEEECCC
EVFSDIEKANTFNEELIRLNNENEKLLEEWSDIEMALEG
HHHHHHHHHCCCCHHHHEECCCCHHHHHHHHCHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]