| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is catE [H]
Identifier: 222151960
GI number: 222151960
Start: 1852361
End: 1853209
Strand: Direct
Name: catE [H]
Synonym: MCCL_1717
Alternate gene names: 222151960
Gene position: 1852361-1853209 (Clockwise)
Preceding gene: 222151958
Following gene: 222151965
Centisome position: 88.11
GC content: 39.58
Gene sequence:
>849_bases ATGGAGAGACAATTCTTTTCGAAAGACACACATATTGGTGCTGTACATCTTAACGTTAACTTTATGGATAACAGCGTAAA GTTTTATCATGAAATATTAGGTATGGATATTATCGAGCATACCCCTACATTTTCATCACTTGGGGTTAATGATAGCGTTC TGATCTATTTATATCAGACGAATCATGCGCGTGTTCAAACTGCAGGGCTGTTTCACTTTGCCCTATTGGTTCCTTCTCGT GCTGCGCTCGGCAATATTTTCTACCACCTCATTAAGACTGAATATCCGTTAGCAGGTGCGAGCAATCATGATGTTTCAGA AGCCATCTATTTGCAGGATCCGGAAGGTAACGGGATAGAAATTTACAGAGATGTGCCAAGCAATGAGTGGCAGTTTGAAC CAAATGGTAATATCGTCATGGGTACATCTGAGATGGATTACGCAGCTGTTATTGAAGCGAATCATAACCGTCCATTCGAT GGTATGCCGAAGGATACAATCATTGGACATATGCATCTATCAGTCATTGATTTAAATCAGTCCATTGCTTTCTATAACGA ATTGTTTGGCTTAGATGTAATGACTCGCTATGGTAGTCAGGCAGCATTTATGGCAACAGCCGGCTACCATCATCATCTTG GATTAAATACATGGCAACATCAGACTGAGCGCGCACGTCTTGATTATCCAGGATTAAGGAAATTCGATTTGAATATCCCG AATGAAGAGGACCTCCAGCACTTCTTAGAAACATTATCAGAAAAAGGATTAACTCAGTCAAAAGACGAGAATTCAAATAT TATATATGACCCTAGCGGCATTGGAATTAGAATAATGACAAAAAATTAG
Upstream 100 bases:
>100_bases TTTAATGCCAGAAATGAATGTCTTGCTATTCTAATAAATTTTAGTATAATTAATATATCTAATATAAAATATATATAATA CATTGTAAAGAGGGATAATA
Downstream 100 bases:
>100_bases AAGTGTAAACTATGGGATTATTTAAGAAAAATATCGCAAGCTTTTTAGGCACTATGAAAACATGAGGACCGTTTCATCAT AAAAAATAAAAGCATCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MERQFFSKDTHIGAVHLNVNFMDNSVKFYHEILGMDIIEHTPTFSSLGVNDSVLIYLYQTNHARVQTAGLFHFALLVPSR AALGNIFYHLIKTEYPLAGASNHDVSEAIYLQDPEGNGIEIYRDVPSNEWQFEPNGNIVMGTSEMDYAAVIEANHNRPFD GMPKDTIIGHMHLSVIDLNQSIAFYNELFGLDVMTRYGSQAAFMATAGYHHHLGLNTWQHQTERARLDYPGLRKFDLNIP NEEDLQHFLETLSEKGLTQSKDENSNIIYDPSGIGIRIMTKN
Sequences:
>Translated_282_residues MERQFFSKDTHIGAVHLNVNFMDNSVKFYHEILGMDIIEHTPTFSSLGVNDSVLIYLYQTNHARVQTAGLFHFALLVPSR AALGNIFYHLIKTEYPLAGASNHDVSEAIYLQDPEGNGIEIYRDVPSNEWQFEPNGNIVMGTSEMDYAAVIEANHNRPFD GMPKDTIIGHMHLSVIDLNQSIAFYNELFGLDVMTRYGSQAAFMATAGYHHHLGLNTWQHQTERARLDYPGLRKFDLNIP NEEDLQHFLETLSEKGLTQSKDENSNIIYDPSGIGIRIMTKN >Mature_282_residues MERQFFSKDTHIGAVHLNVNFMDNSVKFYHEILGMDIIEHTPTFSSLGVNDSVLIYLYQTNHARVQTAGLFHFALLVPSR AALGNIFYHLIKTEYPLAGASNHDVSEAIYLQDPEGNGIEIYRDVPSNEWQFEPNGNIVMGTSEMDYAAVIEANHNRPFD GMPKDTIIGHMHLSVIDLNQSIAFYNELFGLDVMTRYGSQAAFMATAGYHHHLGLNTWQHQTERARLDYPGLRKFDLNIP NEEDLQHFLETLSEKGLTQSKDENSNIIYDPSGIGIRIMTKN
Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 31992; Mature: 31992
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERQFFSKDTHIGAVHLNVNFMDNSVKFYHEILGMDIIEHTPTFSSLGVNDSVLIYLYQT CCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHCCHHHHCCCCHHHCCCCCEEEEEEEEC NHARVQTAGLFHFALLVPSRAALGNIFYHLIKTEYPLAGASNHDVSEAIYLQDPEGNGIE CCCEEEEHHHEEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEE IYRDVPSNEWQFEPNGNIVMGTSEMDYAAVIEANHNRPFDGMPKDTIIGHMHLSVIDLNQ EEEECCCCCEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCC SIAFYNELFGLDVMTRYGSQAAFMATAGYHHHLGLNTWQHQTERARLDYPGLRKFDLNIP HHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCHHHHHHHHCCCCCCCCEEEECCCC NEEDLQHFLETLSEKGLTQSKDENSNIIYDPSGIGIRIMTKN CHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEECC >Mature Secondary Structure MERQFFSKDTHIGAVHLNVNFMDNSVKFYHEILGMDIIEHTPTFSSLGVNDSVLIYLYQT CCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHCCHHHHCCCCHHHCCCCCEEEEEEEEC NHARVQTAGLFHFALLVPSRAALGNIFYHLIKTEYPLAGASNHDVSEAIYLQDPEGNGIE CCCEEEEHHHEEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEE IYRDVPSNEWQFEPNGNIVMGTSEMDYAAVIEANHNRPFDGMPKDTIIGHMHLSVIDLNQ EEEECCCCCEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCC SIAFYNELFGLDVMTRYGSQAAFMATAGYHHHLGLNTWQHQTERARLDYPGLRKFDLNIP HHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCHHHHHHHHCCCCCCCCEEEECCCC NEEDLQHFLETLSEKGLTQSKDENSNIIYDPSGIGIRIMTKN CHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377 [H]