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The map label for this gene is ykpA [H]

Identifier: 222151294

GI number: 222151294

Start: 1154861

End: 1156462

Strand: Direct

Name: ykpA [H]

Synonym: MCCL_1047

Alternate gene names: 222151294

Gene position: 1154861-1156462 (Clockwise)

Preceding gene: 222151292

Following gene: 222151295

Centisome position: 54.93

GC content: 38.39

Gene sequence:

>1602_bases
ATGTTACAAGTATCTAATGTTAGTTTACGTTTCGGAGATAGAAAGTTATTCGAAGATGTAAACATTAAATTCACTCCAGG
CAACTGCTATGGATTAATCGGTGCGAATGGTGCCGGAAAATCAACTTTTTTAAAAATCCTATCTGGTGAGATCGATTCGC
AGACGGGCCACGTTTCATTAGGAAAAGATGAGCGTTTATCTGTTTTAAAACAGGATCACTTTGCCTATGAAGATGAACGC
GTATTAGACGTCGTACTTCGTGGAAATGAAAGATTATGGAATGTAATGAAGGAAAAAGATGAAATCTACATGAAACCTGA
CTTTTCCGATGAAGATGGTATGCGCGCAGCTGAACTTGAAGGTGAATTTGGTGAAATGGGTGGCTGGACTGCAGAAAGTG
ATGCACAAGTATTACTCTCTGGACTCGGTATTAAAGATGAGTTACACGAAAAGAAAATGTCAGAGCTTGAAAACAATCAG
AAGATCAAAGTGCTCTTAGCTCAGGCCCTATTTGGCGAACCTGATGTATTATTACTGGATGAGCCGACGAACGGTCTTGA
TATCCCTGCCATCAGCTGGTTAGAAGAATTTTTAATCAACTTTGAAAACACTGTAATCGTAGTATCCCATGACCGTCACT
TCTTGAACAACGTATGTACGCATATTGCTGATCTTGACTACGGTAAGATTAAAATCTATGTTGGTAACTATGACTTCTGG
TATCAGTCAAGTCAGCTTGCACAACAAATGTTACAGGATTCAAACAAGAAGAAAGAAGAAAAAATTAAAGAACTTCAGGA
CTTCGTTGCACGTTTCTCAGCGAACGCATCAAAATCTAAGCAAGCAACGAGCCGTAAGAAGATGCTTGAAAAAATTGAAC
TTGACGACATTCAGCCATCAAGTCGTAAGTACCCGTTTGTTAACTTTAAACCCGAACGTGAAATTGGTAATGAGCTGCTT
CAAGTTCAAGGATTATCAAAATCTATTGATGGCGTTAAGGTCTTAGATAATATCTCATTCACAATGAATCCGAATGATAA
AGCTGTGCTTGTTGGTGATTCAGAGATTGCTAAGACAACATTACTTAAAATCTTAGCTGGAGAAATGGAGCCTGATGAAG
GCACTTATAAATGGGGTGTAACTACAAGTCAGACGTATTTACCGAAAGATAACTCTGAATACTTTGACGGTAAAAATATT
GACCTTGTAGAATGGTTACGTCAGTATGCTCCACCAGAAGAACAAACTGAAACATTCTTACGTGGTTTCCTGGGACGTAT
GCTTTTCTCAGGTGAAGAAGTCCGTAAGAAAGCAACGGTATTATCAGGTGGAGAGAAAGTACGTTGTATGTTAAGCAAGA
TGATGTTATCGAGTGCGAACGTATTATTATTAGATGAACCGACAAACCATCTGGACTTAGAAAGTATTACTGCAGTAAAC
GATGGCCTTAAAGCATTTAAAGGCTCAATCATCTTTACTTCACATGACTTTGAATTCATCAATACAATCGCCAACCGTGT
CATCGACTTAAATGTCACTGGTGGTCTCTCAAAAGAGGTTACTTATGAAGAATACTTAAAGGAACAAGGCGTATTAAAAT
AA

Upstream 100 bases:

>100_bases
ATAAATGTACTGTAAAGCATGCTATTATTGAATGTGGAATGCAAATTTGTTATCCATATATGGTATAATTTACGCGAAAT
AATTATAAAGGAGATCATAC

Downstream 100 bases:

>100_bases
TTTTCTAAAAATACTTTACAATTCAGAATACTTTTTGTATGATTATATTCATAACTTAATAAAGAAACAGATGAGGCGCA
TCAATCATGAGTACATAACT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MLQVSNVSLRFGDRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIDSQTGHVSLGKDERLSVLKQDHFAYEDER
VLDVVLRGNERLWNVMKEKDEIYMKPDFSDEDGMRAAELEGEFGEMGGWTAESDAQVLLSGLGIKDELHEKKMSELENNQ
KIKVLLAQALFGEPDVLLLDEPTNGLDIPAISWLEEFLINFENTVIVVSHDRHFLNNVCTHIADLDYGKIKIYVGNYDFW
YQSSQLAQQMLQDSNKKKEEKIKELQDFVARFSANASKSKQATSRKKMLEKIELDDIQPSSRKYPFVNFKPEREIGNELL
QVQGLSKSIDGVKVLDNISFTMNPNDKAVLVGDSEIAKTTLLKILAGEMEPDEGTYKWGVTTSQTYLPKDNSEYFDGKNI
DLVEWLRQYAPPEEQTETFLRGFLGRMLFSGEEVRKKATVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVN
DGLKAFKGSIIFTSHDFEFINTIANRVIDLNVTGGLSKEVTYEEYLKEQGVLK

Sequences:

>Translated_533_residues
MLQVSNVSLRFGDRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIDSQTGHVSLGKDERLSVLKQDHFAYEDER
VLDVVLRGNERLWNVMKEKDEIYMKPDFSDEDGMRAAELEGEFGEMGGWTAESDAQVLLSGLGIKDELHEKKMSELENNQ
KIKVLLAQALFGEPDVLLLDEPTNGLDIPAISWLEEFLINFENTVIVVSHDRHFLNNVCTHIADLDYGKIKIYVGNYDFW
YQSSQLAQQMLQDSNKKKEEKIKELQDFVARFSANASKSKQATSRKKMLEKIELDDIQPSSRKYPFVNFKPEREIGNELL
QVQGLSKSIDGVKVLDNISFTMNPNDKAVLVGDSEIAKTTLLKILAGEMEPDEGTYKWGVTTSQTYLPKDNSEYFDGKNI
DLVEWLRQYAPPEEQTETFLRGFLGRMLFSGEEVRKKATVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVN
DGLKAFKGSIIFTSHDFEFINTIANRVIDLNVTGGLSKEVTYEEYLKEQGVLK
>Mature_533_residues
MLQVSNVSLRFGDRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIDSQTGHVSLGKDERLSVLKQDHFAYEDER
VLDVVLRGNERLWNVMKEKDEIYMKPDFSDEDGMRAAELEGEFGEMGGWTAESDAQVLLSGLGIKDELHEKKMSELENNQ
KIKVLLAQALFGEPDVLLLDEPTNGLDIPAISWLEEFLINFENTVIVVSHDRHFLNNVCTHIADLDYGKIKIYVGNYDFW
YQSSQLAQQMLQDSNKKKEEKIKELQDFVARFSANASKSKQATSRKKMLEKIELDDIQPSSRKYPFVNFKPEREIGNELL
QVQGLSKSIDGVKVLDNISFTMNPNDKAVLVGDSEIAKTTLLKILAGEMEPDEGTYKWGVTTSQTYLPKDNSEYFDGKNI
DLVEWLRQYAPPEEQTETFLRGFLGRMLFSGEEVRKKATVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVN
DGLKAFKGSIIFTSHDFEFINTIANRVIDLNVTGGLSKEVTYEEYLKEQGVLK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=544, Percent_Identity=32.3529411764706, Blast_Score=254, Evalue=1e-67,
Organism=Homo sapiens, GI27881506, Length=540, Percent_Identity=29.4444444444444, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI10947137, Length=540, Percent_Identity=29.4444444444444, Blast_Score=217, Evalue=3e-56,
Organism=Homo sapiens, GI10947135, Length=533, Percent_Identity=27.3921200750469, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI69354671, Length=533, Percent_Identity=27.3921200750469, Blast_Score=167, Evalue=2e-41,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=46.1393596986817, Blast_Score=512, Evalue=1e-146,
Organism=Escherichia coli, GI1789751, Length=508, Percent_Identity=33.2677165354331, Blast_Score=275, Evalue=5e-75,
Organism=Escherichia coli, GI2367384, Length=535, Percent_Identity=30.0934579439252, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1787182, Length=513, Percent_Identity=28.6549707602339, Blast_Score=195, Evalue=5e-51,
Organism=Escherichia coli, GI1788450, Length=237, Percent_Identity=27.4261603375527, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1786975, Length=566, Percent_Identity=21.0247349823322, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081791, Length=217, Percent_Identity=29.4930875576037, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=25.5, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786698, Length=219, Percent_Identity=29.2237442922374, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787758, Length=246, Percent_Identity=21.9512195121951, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI48995001, Length=220, Percent_Identity=28.1818181818182, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1788644, Length=242, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789864, Length=232, Percent_Identity=24.1379310344828, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=546, Percent_Identity=31.1355311355311, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17555318, Length=545, Percent_Identity=27.8899082568807, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17559834, Length=518, Percent_Identity=27.027027027027, Blast_Score=195, Evalue=6e-50,
Organism=Saccharomyces cerevisiae, GI6320874, Length=523, Percent_Identity=32.3135755258126, Blast_Score=239, Evalue=9e-64,
Organism=Saccharomyces cerevisiae, GI6321121, Length=535, Percent_Identity=30.0934579439252, Blast_Score=217, Evalue=5e-57,
Organism=Saccharomyces cerevisiae, GI6325030, Length=376, Percent_Identity=25.7978723404255, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=370, Percent_Identity=25.1351351351351, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6323278, Length=371, Percent_Identity=25.0673854447439, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24666836, Length=515, Percent_Identity=29.9029126213592, Blast_Score=231, Evalue=6e-61,
Organism=Drosophila melanogaster, GI24642252, Length=514, Percent_Identity=27.8210116731518, Blast_Score=218, Evalue=8e-57,
Organism=Drosophila melanogaster, GI18859989, Length=514, Percent_Identity=27.8210116731518, Blast_Score=218, Evalue=8e-57,
Organism=Drosophila melanogaster, GI24641342, Length=515, Percent_Identity=29.5145631067961, Blast_Score=210, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60172; Mature: 60172

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQVSNVSLRFGDRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIDSQTGHVSL
CEEECCEEEEECCHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEC
GKDERLSVLKQDHFAYEDERVLDVVLRGNERLWNVMKEKDEIYMKPDFSDEDGMRAAELE
CCHHHHHHHHHHHCCCCCCHHEEEEECCCHHHHHHHHCCCCEEECCCCCCCCCCEEECCC
GEFGEMGGWTAESDAQVLLSGLGIKDELHEKKMSELENNQKIKVLLAQALFGEPDVLLLD
CCHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCEEEEE
EPTNGLDIPAISWLEEFLINFENTVIVVSHDRHFLNNVCTHIADLDYGKIKIYVGNYDFW
CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCHHE
YQSSQLAQQMLQDSNKKKEEKIKELQDFVARFSANASKSKQATSRKKMLEKIELDDIQPS
ECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SRKYPFVNFKPEREIGNELLQVQGLSKSIDGVKVLDNISFTMNPNDKAVLVGDSEIAKTT
CCCCCEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCCEEEECCHHHHHHH
LLKILAGEMEPDEGTYKWGVTTSQTYLPKDNSEYFDGKNIDLVEWLRQYAPPEEQTETFL
HHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
RGFLGRMLFSGEEVRKKATVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVN
HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DGLKAFKGSIIFTSHDFEFINTIANRVIDLNVTGGLSKEVTYEEYLKEQGVLK
HHHHHHCCCEEEEECCHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MLQVSNVSLRFGDRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIDSQTGHVSL
CEEECCEEEEECCHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEC
GKDERLSVLKQDHFAYEDERVLDVVLRGNERLWNVMKEKDEIYMKPDFSDEDGMRAAELE
CCHHHHHHHHHHHCCCCCCHHEEEEECCCHHHHHHHHCCCCEEECCCCCCCCCCEEECCC
GEFGEMGGWTAESDAQVLLSGLGIKDELHEKKMSELENNQKIKVLLAQALFGEPDVLLLD
CCHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCEEEEE
EPTNGLDIPAISWLEEFLINFENTVIVVSHDRHFLNNVCTHIADLDYGKIKIYVGNYDFW
CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCHHE
YQSSQLAQQMLQDSNKKKEEKIKELQDFVARFSANASKSKQATSRKKMLEKIELDDIQPS
ECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SRKYPFVNFKPEREIGNELLQVQGLSKSIDGVKVLDNISFTMNPNDKAVLVGDSEIAKTT
CCCCCEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCCEEEECCHHHHHHH
LLKILAGEMEPDEGTYKWGVTTSQTYLPKDNSEYFDGKNIDLVEWLRQYAPPEEQTETFL
HHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
RGFLGRMLFSGEEVRKKATVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVN
HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DGLKAFKGSIIFTSHDFEFINTIANRVIDLNVTGGLSKEVTYEEYLKEQGVLK
HHHHHHCCCEEEEECCHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]