| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is msrR [H]
Identifier: 222151267
GI number: 222151267
Start: 1128916
End: 1129857
Strand: Direct
Name: msrR [H]
Synonym: MCCL_1020
Alternate gene names: 222151267
Gene position: 1128916-1129857 (Clockwise)
Preceding gene: 222151265
Following gene: 222151269
Centisome position: 53.7
GC content: 36.41
Gene sequence:
>942_bases ATGAGCGAAGGGATAACGCCAAGAAGAAAAGGAAAGAAAATCAGATTAAAAAAACTACCATTTGTAATTTTGGGATTAGT TTTATTACTTATACTGGTAGTAGTTTTTATCAAATCAAGTTATAATAGTGGTCTTGATTTAGCAGCAAGACATGGGCAAA AGCATGTCAACTATGACTTTAATGGAGTATCTAATAAAGACGGTAAATCAAATGTTTTAATTTTAGGTCAAGATCGCATG ATTGATGGATCAGCAAGAACGGACTCTATTATGATCGCACAATACGACTTCCTTAATAAGAAGGTAAAAATCATTTCAGT CATGCGCGATATATATGCTGAAATTCCAGGATATAGAAACTATAAAATTAATACAGCCTACACGTTAGGTGGGCCAGAGT TACTGCGTAAGACGATAGAGAAAAATTTAGGTATTCCAATAGAACATTATGCAATTATAGATTTCAAAGGGTTCGAGGCC ATGGTAGATGAAATCTCACCTTCTGGAGTACCGGTAAATGTGGAAAAGGATATGTCTGAAAATATCGGTGTATCTTTAAA GAAAGGTCAGCATAATCTAAATGGTAAAGAATTATTAGGATATGCTCGTTTTAGACATGATGAAGAAGGGGACTTTGGAC GCGTAAGACGTCAGCAGCAAGTAATTTCTGCGTTAAAACAAGAAATGGTCAGTCTTCCTGTGTTCTTTAAAACACCGAAA TTAGCGGGAATTGCAAGAGGTTATGTCAATACCGACCTTAAAGATGGCGAGATATTTCGAATGGGAACAAGCTTTGTAAT CCGTGGAGACAAGAAGCAGAGCACATTGACCGTACCAGTAAAAGGAAGTTTCCAGCAGGCAAGCTATCCTGAAGCAGGGG CTGTGCTTGAAATAGATAAAGAAATGAATAAAAAGGCGATACAGAAGTTCTTAAATGAATAA
Upstream 100 bases:
>100_bases TATTTTACTTTATTATTTGGAAAATAAACCGATATATGCTTGCAATAATGTAAATTCTTTTATAAGTTTATTATATTGTA ATATAGAAAGCAGGGTATGT
Downstream 100 bases:
>100_bases AAACAGGAGAAGCGATTGCTTCTCCTGTTTTTATTGTTGATCTGATAATAATTGACCCGCTACTGCATAACGTTCTTTTT TAAGTTCTTCAATAAATACA
Product: peptide methionine sulfoxide reductase regulator MsrR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSEGITPRRKGKKIRLKKLPFVILGLVLLLILVVVFIKSSYNSGLDLAARHGQKHVNYDFNGVSNKDGKSNVLILGQDRM IDGSARTDSIMIAQYDFLNKKVKIISVMRDIYAEIPGYRNYKINTAYTLGGPELLRKTIEKNLGIPIEHYAIIDFKGFEA MVDEISPSGVPVNVEKDMSENIGVSLKKGQHNLNGKELLGYARFRHDEEGDFGRVRRQQQVISALKQEMVSLPVFFKTPK LAGIARGYVNTDLKDGEIFRMGTSFVIRGDKKQSTLTVPVKGSFQQASYPEAGAVLEIDKEMNKKAIQKFLNE
Sequences:
>Translated_313_residues MSEGITPRRKGKKIRLKKLPFVILGLVLLLILVVVFIKSSYNSGLDLAARHGQKHVNYDFNGVSNKDGKSNVLILGQDRM IDGSARTDSIMIAQYDFLNKKVKIISVMRDIYAEIPGYRNYKINTAYTLGGPELLRKTIEKNLGIPIEHYAIIDFKGFEA MVDEISPSGVPVNVEKDMSENIGVSLKKGQHNLNGKELLGYARFRHDEEGDFGRVRRQQQVISALKQEMVSLPVFFKTPK LAGIARGYVNTDLKDGEIFRMGTSFVIRGDKKQSTLTVPVKGSFQQASYPEAGAVLEIDKEMNKKAIQKFLNE >Mature_312_residues SEGITPRRKGKKIRLKKLPFVILGLVLLLILVVVFIKSSYNSGLDLAARHGQKHVNYDFNGVSNKDGKSNVLILGQDRMI DGSARTDSIMIAQYDFLNKKVKIISVMRDIYAEIPGYRNYKINTAYTLGGPELLRKTIEKNLGIPIEHYAIIDFKGFEAM VDEISPSGVPVNVEKDMSENIGVSLKKGQHNLNGKELLGYARFRHDEEGDFGRVRRQQQVISALKQEMVSLPVFFKTPKL AGIARGYVNTDLKDGEIFRMGTSFVIRGDKKQSTLTVPVKGSFQQASYPEAGAVLEIDKEMNKKAIQKFLNE
Specific function: Involved in sarA attenuation. Affects resistance to oxacillin and teicoplanin, as well as the synthesis of virulence factors [H]
COG id: COG1316
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004474 [H]
Pfam domain/function: PF03816 LytR_cpsA_psr [H]
EC number: NA
Molecular weight: Translated: 35084; Mature: 34953
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGITPRRKGKKIRLKKLPFVILGLVLLLILVVVFIKSSYNSGLDLAARHGQKHVNYDF CCCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC NGVSNKDGKSNVLILGQDRMIDGSARTDSIMIAQYDFLNKKVKIISVMRDIYAEIPGYRN CCCCCCCCCCCEEEEECCCEECCCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHCCCCCC YKINTAYTLGGPELLRKTIEKNLGIPIEHYAIIDFKGFEAMVDEISPSGVPVNVEKDMSE EEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHCCCCCCEEEECCCCCC NIGVSLKKGQHNLNGKELLGYARFRHDEEGDFGRVRRQQQVISALKQEMVSLPVFFKTPK CCCEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCC LAGIARGYVNTDLKDGEIFRMGTSFVIRGDKKQSTLTVPVKGSFQQASYPEAGAVLEIDK HHHHHHCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEECH EMNKKAIQKFLNE HHHHHHHHHHHCC >Mature Secondary Structure SEGITPRRKGKKIRLKKLPFVILGLVLLLILVVVFIKSSYNSGLDLAARHGQKHVNYDF CCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC NGVSNKDGKSNVLILGQDRMIDGSARTDSIMIAQYDFLNKKVKIISVMRDIYAEIPGYRN CCCCCCCCCCCEEEEECCCEECCCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHCCCCCC YKINTAYTLGGPELLRKTIEKNLGIPIEHYAIIDFKGFEAMVDEISPSGVPVNVEKDMSE EEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHCCCCCCEEEECCCCCC NIGVSLKKGQHNLNGKELLGYARFRHDEEGDFGRVRRQQQVISALKQEMVSLPVFFKTPK CCCEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCC LAGIARGYVNTDLKDGEIFRMGTSFVIRGDKKQSTLTVPVKGSFQQASYPEAGAVLEIDK HHHHHHCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEECH EMNKKAIQKFLNE HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12878519 [H]