| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is 222151269
Identifier: 222151269
GI number: 222151269
Start: 1131205
End: 1131675
Strand: Direct
Name: 222151269
Synonym: MCCL_1022
Alternate gene names: NA
Gene position: 1131205-1131675 (Clockwise)
Preceding gene: 222151267
Following gene: 222151271
Centisome position: 53.81
GC content: 31.0
Gene sequence:
>471_bases TTGATTGATTTGATGCTATTACTTTATTTTAAATTTTCAATTAACTATGCGACAATAGAAGTAACTTATATCAGGAGGGT TATTATGTTTAAAGAATTATTAACATCTATCGGTATTGGAGATTCTAAAATCAACACAAAGCTGGAGAAAACATCATTCA GGTTAGACGAAGATATTAACGGGGTAGTGGATGTACATGAATTAGATGGACTTGAGATTGATCACATAGAATTATCATTA ATTGAACGTAAGGAAAATAAGGATGAAATGAGTCAATTCGAATACTTAGATGAGAAATTAGCATCATTTACTATCGAAAA CAGAGGATCAGAAACAATTCCATTCACATTTCCGGCAATTCATAACGTTGAAGATGTAAATCATACGTTCGTGATCATTA CACATGTATTTGTCAGCAGCTCAGTTGATTATTATGATGAGGATGAAATTTACTTTGAAAGTGTCAGTTAA
Upstream 100 bases:
>100_bases AGTAATGTAAATAATCCTGTCATAGAATTCTCCTAACATAATTTAATTTTATATTTACTTTACCTATTATAGGTGAAAAT AAACATAATAAAAAGAATAC
Downstream 100 bases:
>100_bases AGTTAATAACTAAAAAATAGATAATAAAGATAAAATAAAGAAATTACTTATAAACATGGGAATTTTAACAATCTATTCAG CGTATGGATACTATGGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MIDLMLLLYFKFSINYATIEVTYIRRVIMFKELLTSIGIGDSKINTKLEKTSFRLDEDINGVVDVHELDGLEIDHIELSL IERKENKDEMSQFEYLDEKLASFTIENRGSETIPFTFPAIHNVEDVNHTFVIITHVFVSSSVDYYDEDEIYFESVS
Sequences:
>Translated_156_residues MIDLMLLLYFKFSINYATIEVTYIRRVIMFKELLTSIGIGDSKINTKLEKTSFRLDEDINGVVDVHELDGLEIDHIELSL IERKENKDEMSQFEYLDEKLASFTIENRGSETIPFTFPAIHNVEDVNHTFVIITHVFVSSSVDYYDEDEIYFESVS >Mature_156_residues MIDLMLLLYFKFSINYATIEVTYIRRVIMFKELLTSIGIGDSKINTKLEKTSFRLDEDINGVVDVHELDGLEIDHIELSL IERKENKDEMSQFEYLDEKLASFTIENRGSETIPFTFPAIHNVEDVNHTFVIITHVFVSSSVDYYDEDEIYFESVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18190; Mature: 18190
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLMLLLYFKFSINYATIEVTYIRRVIMFKELLTSIGIGDSKINTKLEKTSFRLDEDIN CHHHHEEHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHCCCCCCCC GVVDVHELDGLEIDHIELSLIERKENKDEMSQFEYLDEKLASFTIENRGSETIPFTFPAI CEEEEECCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEECCCC HNVEDVNHTFVIITHVFVSSSVDYYDEDEIYFESVS CCCCCCCCEEEEEEEHHHHCCCCCCCCCCEEEEECC >Mature Secondary Structure MIDLMLLLYFKFSINYATIEVTYIRRVIMFKELLTSIGIGDSKINTKLEKTSFRLDEDIN CHHHHEEHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHCCCCCCCC GVVDVHELDGLEIDHIELSLIERKENKDEMSQFEYLDEKLASFTIENRGSETIPFTFPAI CEEEEECCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEECCCC HNVEDVNHTFVIITHVFVSSSVDYYDEDEIYFESVS CCCCCCCCEEEEEEEHHHHCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA