| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151228
Identifier: 222151228
GI number: 222151228
Start: 1076347
End: 1077309
Strand: Direct
Name: 222151228
Synonym: MCCL_0979
Alternate gene names: NA
Gene position: 1076347-1077309 (Clockwise)
Preceding gene: 222151227
Following gene: 222151229
Centisome position: 51.2
GC content: 35.72
Gene sequence:
>963_bases ATGATGACTGAGGTTAATAAATCTATATATCTAGATGTAGCAAGAAGATATTACGATATGCAATCTTTGTATGAAGTAGT AGATATTGTATACGAAAATGAACAGAAAGAACTCTTTCTGCACCTATCAGATAATGAAGCATTTAGGGTGGAGATGAATC TTTTTAAGAAGACACCTTATAAAGCGTATTCAAAGCAAGAAATTAATGATCTGTGTAAATACGCATATGAACGTAATGTA ATGATCATCCCAGTGTTAGACATACCTTCGCATTCAGGGGGATGGTTGAATCTACTCAAACTTAATGATGAAGAGAGATA CAATAAGGTTGTCTCTGATTTTGATGAACACACTGTAAACTATTGGGACGATGGAGAGCCTATTAAATTTATTAAGAGTA TGATTGACGAGATTGCAGATGCATTCAAAATTCCTGGATATAAAGGGGAACAGATATTTCACCTTGGAATGGATGAGGTG CCTGCTGCTATAAGTAATCAAAAATGGCTTTTTTGGTTTATGGAACATCTTTTCAAGCACGTTGAATCTCACAACTATAT ACCGGTGATATGGAACGATCAAGTAACCCCAAAGTTTCTAGAAATGGCTTTAGATGCTGGGATGAGAGACAGTTTAAGAT TCAGTTATTGGCAACAAAGCCTAAAAGGTACTGTATCTCCTGATGATATAATGAATAACTTCAAACTCTATAACGGAAAC TCTTACCCTCAGACGTTCAGCGCAAAGACGTTAGATTCGAAGAAGGATATGGAATACATGAAACAGCATTCAGGGATTGA TAAATTTAATGTTATAGGAGACATAACGTATGAAGCAAAAATAAGAAATGTTTGTGGCTCGTTACTTACGCTATGGGGAG AGGATTCAGAATCTCGTCCAGAAAAGGAAATTATCACAGAACTAAGAAGAATGTTTACCGCATTCGTACAGGAAGCTAAA TAG
Upstream 100 bases:
>100_bases CTCACTATACGAAGAGATTAAACAAGAAATAAAGACTATAAAAGCAGAAAAGATATCTTAAACAGTTGGATCAAACATCT TATTTAAAAGGAGAATTCAA
Downstream 100 bases:
>100_bases TAAGAGGATGTTAAAACATAAATGATAAGCATTAGGCAGATAGCCTGATGCTTATTTTAATTGGAGGAATTTATAAATGA ATAAAGAACTACAGTTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-N-Acetylhexosaminidase; Glycoside Hydrolase Family Protein; Lacto-N-Biosidase; Glycoside Hydrolase Family
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MMTEVNKSIYLDVARRYYDMQSLYEVVDIVYENEQKELFLHLSDNEAFRVEMNLFKKTPYKAYSKQEINDLCKYAYERNV MIIPVLDIPSHSGGWLNLLKLNDEERYNKVVSDFDEHTVNYWDDGEPIKFIKSMIDEIADAFKIPGYKGEQIFHLGMDEV PAAISNQKWLFWFMEHLFKHVESHNYIPVIWNDQVTPKFLEMALDAGMRDSLRFSYWQQSLKGTVSPDDIMNNFKLYNGN SYPQTFSAKTLDSKKDMEYMKQHSGIDKFNVIGDITYEAKIRNVCGSLLTLWGEDSESRPEKEIITELRRMFTAFVQEAK
Sequences:
>Translated_320_residues MMTEVNKSIYLDVARRYYDMQSLYEVVDIVYENEQKELFLHLSDNEAFRVEMNLFKKTPYKAYSKQEINDLCKYAYERNV MIIPVLDIPSHSGGWLNLLKLNDEERYNKVVSDFDEHTVNYWDDGEPIKFIKSMIDEIADAFKIPGYKGEQIFHLGMDEV PAAISNQKWLFWFMEHLFKHVESHNYIPVIWNDQVTPKFLEMALDAGMRDSLRFSYWQQSLKGTVSPDDIMNNFKLYNGN SYPQTFSAKTLDSKKDMEYMKQHSGIDKFNVIGDITYEAKIRNVCGSLLTLWGEDSESRPEKEIITELRRMFTAFVQEAK >Mature_320_residues MMTEVNKSIYLDVARRYYDMQSLYEVVDIVYENEQKELFLHLSDNEAFRVEMNLFKKTPYKAYSKQEINDLCKYAYERNV MIIPVLDIPSHSGGWLNLLKLNDEERYNKVVSDFDEHTVNYWDDGEPIKFIKSMIDEIADAFKIPGYKGEQIFHLGMDEV PAAISNQKWLFWFMEHLFKHVESHNYIPVIWNDQVTPKFLEMALDAGMRDSLRFSYWQQSLKGTVSPDDIMNNFKLYNGN SYPQTFSAKTLDSKKDMEYMKQHSGIDKFNVIGDITYEAKIRNVCGSLLTLWGEDSESRPEKEIITELRRMFTAFVQEAK
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37725; Mature: 37725
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTEVNKSIYLDVARRYYDMQSLYEVVDIVYENEQKELFLHLSDNEAFRVEMNLFKKTPY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHCCCC KAYSKQEINDLCKYAYERNVMIIPVLDIPSHSGGWLNLLKLNDEERYNKVVSDFDEHTVN HHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCC YWDDGEPIKFIKSMIDEIADAFKIPGYKGEQIFHLGMDEVPAAISNQKWLFWFMEHLFKH CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHH VESHNYIPVIWNDQVTPKFLEMALDAGMRDSLRFSYWQQSLKGTVSPDDIMNNFKLYNGN HHCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCC SYPQTFSAKTLDSKKDMEYMKQHSGIDKFNVIGDITYEAKIRNVCGSLLTLWGEDSESRP CCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHEECEEHHHHHHHHHHHHHHHCCCCCCCCC EKEIITELRRMFTAFVQEAK HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMTEVNKSIYLDVARRYYDMQSLYEVVDIVYENEQKELFLHLSDNEAFRVEMNLFKKTPY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHCCCC KAYSKQEINDLCKYAYERNVMIIPVLDIPSHSGGWLNLLKLNDEERYNKVVSDFDEHTVN HHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCC YWDDGEPIKFIKSMIDEIADAFKIPGYKGEQIFHLGMDEVPAAISNQKWLFWFMEHLFKH CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHH VESHNYIPVIWNDQVTPKFLEMALDAGMRDSLRFSYWQQSLKGTVSPDDIMNNFKLYNGN HHCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCC SYPQTFSAKTLDSKKDMEYMKQHSGIDKFNVIGDITYEAKIRNVCGSLLTLWGEDSESRP CCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHEECEEHHHHHHHHHHHHHHHCCCCCCCCC EKEIITELRRMFTAFVQEAK HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA