Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is ymfK [H]

Identifier: 222151121

GI number: 222151121

Start: 960538

End: 961329

Strand: Direct

Name: ymfK [H]

Synonym: MCCL_0872

Alternate gene names: 222151121

Gene position: 960538-961329 (Clockwise)

Preceding gene: 222151120

Following gene: 222151122

Centisome position: 45.69

GC content: 36.62

Gene sequence:

>792_bases
ATGGAACAAACTTTAAAGAAGGAATGGTACCTTGAATATGAGATAGTGATTAATCGTGCGGGACTTCTAGGTGATGTATC
AAGTCTACTAGGAGCACTTGGCATCAGTATTATTACGATTAATGGTGTTGATCAGGGAAAGCGTGGACTACTCATTAAGA
CAGATGATGTTGAGAAGGTGAAACGATTTGAACATATTATTAGTCAACTTGATGATATTGAAATCGTTAAGCTGCGTAAA
CCGAGATTGACAGATCGTCTTGCAGTGCGTCATGGGCAGTACATACAGAAGGATACCCATGAGAAAAATACTTTTCGCTT
TGTTCGTAAAGAACTGGGAATACTGGTTGATCTAATGGCAGAACTCTTTAAAGAAGATGGACATCGATTGATTGGAATTA
GAGGGATGCCGCGTGTAGGGAAGACAGAATCTATTGTTGCTGCAAGTGTATGTGCACATAAGAAATGGTTATTTATTTCT
TCGACAATGATTAAGCAGACAGTGCGTAATTCTTTATTTAAAGGAGAATATGATGACAGTCATATTTACATAATAGACGG
TGCGCTTTCAATCCGACAAAAGCCAGAGCACCTGGATCTAATCCGTGAAGTGATGGCACTACCTGCAACGAAAGTGGTCG
AACATCCTGATCTATTTGTACAAAAAACCGATTATACATTAGATGATTTTGATTATATTATTGAGATTCGTGAAACTGAA
ACTCAGGAAATTACTTATGAACAATTATCTAAAAATAATTTGTTTGATAACGATGAGTTTGGATTTTTTTAA

Upstream 100 bases:

>100_bases
ATCAGCCATTTTGTACGTGCTCTGTTACACCAGTATAGCCATACCACAACAGGCACTGTAATACGTATTAATGGTGGCTG
GTATATATAGGAGGAAACGA

Downstream 100 bases:

>100_bases
TAAAGGAGCACTTTAATGAAACAAATTGGGCAAATTCTAAGATCTAAACGTGAGTCTCTTGGTATGACATTAATCGACCT
TGAAAAGAAAATTAAAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MEQTLKKEWYLEYEIVINRAGLLGDVSSLLGALGISIITINGVDQGKRGLLIKTDDVEKVKRFEHIISQLDDIEIVKLRK
PRLTDRLAVRHGQYIQKDTHEKNTFRFVRKELGILVDLMAELFKEDGHRLIGIRGMPRVGKTESIVAASVCAHKKWLFIS
STMIKQTVRNSLFKGEYDDSHIYIIDGALSIRQKPEHLDLIREVMALPATKVVEHPDLFVQKTDYTLDDFDYIIEIRETE
TQEITYEQLSKNNLFDNDEFGFF

Sequences:

>Translated_263_residues
MEQTLKKEWYLEYEIVINRAGLLGDVSSLLGALGISIITINGVDQGKRGLLIKTDDVEKVKRFEHIISQLDDIEIVKLRK
PRLTDRLAVRHGQYIQKDTHEKNTFRFVRKELGILVDLMAELFKEDGHRLIGIRGMPRVGKTESIVAASVCAHKKWLFIS
STMIKQTVRNSLFKGEYDDSHIYIIDGALSIRQKPEHLDLIREVMALPATKVVEHPDLFVQKTDYTLDDFDYIIEIRETE
TQEITYEQLSKNNLFDNDEFGFF
>Mature_263_residues
MEQTLKKEWYLEYEIVINRAGLLGDVSSLLGALGISIITINGVDQGKRGLLIKTDDVEKVKRFEHIISQLDDIEIVKLRK
PRLTDRLAVRHGQYIQKDTHEKNTFRFVRKELGILVDLMAELFKEDGHRLIGIRGMPRVGKTESIVAASVCAHKKWLFIS
STMIKQTVRNSLFKGEYDDSHIYIIDGALSIRQKPEHLDLIREVMALPATKVVEHPDLFVQKTDYTLDDFDYIIEIRETE
TQEITYEQLSKNNLFDNDEFGFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR016784 [H]

Pfam domain/function: PF01842 ACT [H]

EC number: NA

Molecular weight: Translated: 30426; Mature: 30426

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTLKKEWYLEYEIVINRAGLLGDVSSLLGALGISIITINGVDQGKRGLLIKTDDVEKV
CCCCHHHHHEEEEEEEEECCCCHHHHHHHHHHHCEEEEEEECCCCCCCEEEEECCCHHHH
KRFEHIISQLDDIEIVKLRKPRLTDRLAVRHGQYIQKDTHEKNTFRFVRKELGILVDLMA
HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ELFKEDGHRLIGIRGMPRVGKTESIVAASVCAHKKWLFISSTMIKQTVRNSLFKGEYDDS
HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCC
HIYIIDGALSIRQKPEHLDLIREVMALPATKVVEHPDLFVQKTDYTLDDFDYIIEIRETE
EEEEEECCEECCCCCHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCEEEEEEECCC
TQEITYEQLSKNNLFDNDEFGFF
CHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEQTLKKEWYLEYEIVINRAGLLGDVSSLLGALGISIITINGVDQGKRGLLIKTDDVEKV
CCCCHHHHHEEEEEEEEECCCCHHHHHHHHHHHCEEEEEEECCCCCCCEEEEECCCHHHH
KRFEHIISQLDDIEIVKLRKPRLTDRLAVRHGQYIQKDTHEKNTFRFVRKELGILVDLMA
HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ELFKEDGHRLIGIRGMPRVGKTESIVAASVCAHKKWLFISSTMIKQTVRNSLFKGEYDDS
HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCC
HIYIIDGALSIRQKPEHLDLIREVMALPATKVVEHPDLFVQKTDYTLDDFDYIIEIRETE
EEEEEECCEECCCCCHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCEEEEEEECCC
TQEITYEQLSKNNLFDNDEFGFF
CHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]