| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is cdsA [H]
Identifier: 222151094
GI number: 222151094
Start: 921001
End: 921786
Strand: Direct
Name: cdsA [H]
Synonym: MCCL_0845
Alternate gene names: 222151094
Gene position: 921001-921786 (Clockwise)
Preceding gene: 222151093
Following gene: 222151095
Centisome position: 43.81
GC content: 36.13
Gene sequence:
>786_bases ATGAAAACGAGAACGATTACTGCGATAATCGCAATGGCAGTTTTTTTGCCTGTAGTTGTATATGGAAAGCTGCCACTATT AATTATGGCATACTTACTTGCGATTGTAGCGCTTAAAGAAGTATTAAATATGAAGAATATCAAGCTTTATTCATTACCTG GCATCATTAGTGTTATTGCGCTATGTTTAATTATGTCACCAGAAAAAAGTAAGCTTGTTGCACTTGATTATCAGGTTCCT TTTTTGATATTAATGAGTTTGATTATGCTGAGCTATACAGTGATGAGTAAGAATAGATTTAATTTCGTAGATGCTGCATT TTGTATGCTTGCAGTTGCATATATTGGGATTGGTTTTATGTATTTCTACGAGACGCGTAATAACGGTCTGATTTATATCT TATTTGCTTTGCTTATCGTATGGGTCACAGATACAGGTGCATACATATTTGGGCGTTTATTTGGCAAGAATAAGCTGTGG CCAGAAATCAGTCCCAATAAAACGATAGAAGGCTTTATAGGAGGTATTCTAAGTTCTACGATAATAGCAATTATATTCAG CATCAATTATGATATGCCACTATCGATCTTGCCACTGATTCTGGTAACCTGGTTATTCAGTATGTTCGGTCAGCTCGGTG ATTTAGTGGAAAGTGCATTAAAGCGTCATTTCGACGTTAAAGACTCAGGGAATCTTCTGCCGGGTCACGGTGGGATTCTT GACCGCTTCGATTCATTTATCTTTGTATTACCTTTAATGAACATATTGTTGATCAGTTTCAAGTAA
Upstream 100 bases:
>100_bases GATGAATACTGGCCAGACTTTACAGTACAAAGTTTAGATAAATGTATTTCAATATACCAGAATCGACATAGACGATTCGG TGGACTATAAGGAGTAAATC
Downstream 100 bases:
>100_bases ATCATAGTATCTCTTTATAGCTACAGCCCTATTCGTGCCTTGTTTAATCATGAATAGGGTTATTTTTTGTGGTAGATTAG TATTTGAATTTCTTATGATG
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKTRTITAIIAMAVFLPVVVYGKLPLLIMAYLLAIVALKEVLNMKNIKLYSLPGIISVIALCLIMSPEKSKLVALDYQVP FLILMSLIMLSYTVMSKNRFNFVDAAFCMLAVAYIGIGFMYFYETRNNGLIYILFALLIVWVTDTGAYIFGRLFGKNKLW PEISPNKTIEGFIGGILSSTIIAIIFSINYDMPLSILPLILVTWLFSMFGQLGDLVESALKRHFDVKDSGNLLPGHGGIL DRFDSFIFVLPLMNILLISFK
Sequences:
>Translated_261_residues MKTRTITAIIAMAVFLPVVVYGKLPLLIMAYLLAIVALKEVLNMKNIKLYSLPGIISVIALCLIMSPEKSKLVALDYQVP FLILMSLIMLSYTVMSKNRFNFVDAAFCMLAVAYIGIGFMYFYETRNNGLIYILFALLIVWVTDTGAYIFGRLFGKNKLW PEISPNKTIEGFIGGILSSTIIAIIFSINYDMPLSILPLILVTWLFSMFGQLGDLVESALKRHFDVKDSGNLLPGHGGIL DRFDSFIFVLPLMNILLISFK >Mature_261_residues MKTRTITAIIAMAVFLPVVVYGKLPLLIMAYLLAIVALKEVLNMKNIKLYSLPGIISVIALCLIMSPEKSKLVALDYQVP FLILMSLIMLSYTVMSKNRFNFVDAAFCMLAVAYIGIGFMYFYETRNNGLIYILFALLIVWVTDTGAYIFGRLFGKNKLW PEISPNKTIEGFIGGILSSTIIAIIFSINYDMPLSILPLILVTWLFSMFGQLGDLVESALKRHFDVKDSGNLLPGHGGIL DRFDSFIFVLPLMNILLISFK
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=138, Percent_Identity=41.304347826087, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1787677, Length=109, Percent_Identity=44.954128440367, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 29233; Mature: 29233
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRTITAIIAMAVFLPVVVYGKLPLLIMAYLLAIVALKEVLNMKNIKLYSLPGIISVIA CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH LCLIMSPEKSKLVALDYQVPFLILMSLIMLSYTVMSKNRFNFVDAAFCMLAVAYIGIGFM HHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH YFYETRNNGLIYILFALLIVWVTDTGAYIFGRLFGKNKLWPEISPNKTIEGFIGGILSST HEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH IIAIIFSINYDMPLSILPLILVTWLFSMFGQLGDLVESALKRHFDVKDSGNLLPGHGGIL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH DRFDSFIFVLPLMNILLISFK HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTRTITAIIAMAVFLPVVVYGKLPLLIMAYLLAIVALKEVLNMKNIKLYSLPGIISVIA CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH LCLIMSPEKSKLVALDYQVPFLILMSLIMLSYTVMSKNRFNFVDAAFCMLAVAYIGIGFM HHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH YFYETRNNGLIYILFALLIVWVTDTGAYIFGRLFGKNKLWPEISPNKTIEGFIGGILSST HEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH IIAIIFSINYDMPLSILPLILVTWLFSMFGQLGDLVESALKRHFDVKDSGNLLPGHGGIL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH DRFDSFIFVLPLMNILLISFK HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA