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The map label for this gene is potC [H]

Identifier: 222150967

GI number: 222150967

Start: 773560

End: 774369

Strand: Direct

Name: potC [H]

Synonym: MCCL_0717

Alternate gene names: 222150967

Gene position: 773560-774369 (Clockwise)

Preceding gene: 222150966

Following gene: 222150968

Centisome position: 36.8

GC content: 38.15

Gene sequence:

>810_bases
ATGAAACTAAGAGGTAAATTGTTTTTAGCGGTCGCACTTTTCATTTTATATTTCCCAATTTTCTATTTGATGTTCTATTC
CTTTAATTCTGCTGGCAATATGAATCATTTCGAATCCTTTACGCTAGATCATTACAAAGCAGTGTTTGAGAATAAGCGCC
TACTCGTTATTATCGTGAATACACTCGCTGTGGCACTTATTGCCGCAAGCATCTCTACAGTGATTGGTATCTGTGGGGCT
ATTGCAATACACTATATGCGCAATAAGAAGATTAAAATTGGACTATTGACATTAAACAATATATTGATGGTAAGTTCTGA
TGTAGTGATCGGCTCTTCATTTTTAATCTTATTTACTGCGATCGGTCACTTTACAGGACTTGGACTTGGATTCTGGTCTG
TACTCATATCGCATATCGCTTTTTGTGTGCCCATCGTGGTGCTGCTCGTATTACCGAAACTATATGATCTAAATACGTCT
CTTATTAATGCAAGCTATGACTTAGGTGCGAGTACATGGCAGACGATCAAAAATGTCATTATCCCGCACATACTGCCTGG
TGCACTTGCTGGATTCTTTATGGCACTGACTTATAGTCTCGATGACTTTACGGTCAGTTTCTTCGTCACTGGAAATGGCT
TTAGCGTATTATCTGTGGAAATCTACTCGATGGCACGAAAAGGCATTTCAATGGAAATCAATGCGATCAGCACATTAATG
TTCTTAGTCGTGATGACGATCATTGCAATTTACTACGTATTAACAACAAATGCAGATAAAAAGAAGTTAAAGGCAGGTGC
AAAATCATGA

Upstream 100 bases:

>100_bases
AGAACTACGGGATGGGCTCGACGATTGCCGTATTCTTAATTTTAGCGATGGCATTCGTGATGATCATCACGAAATCTAAA
AACGAAAGCGAGGATATAAA

Downstream 100 bases:

>100_bases
AACAGCTGATGCAGTTAATCTTCATCTCACTTGCAGTTGCCGTATTGTTGTTATTCTCAAGCCGCTTCATCAATCCACCG
CCATCAGGTGGAAAAGGGAA

Product: spermidine/putrescine ABC transporter permease

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKLRGKLFLAVALFILYFPIFYLMFYSFNSAGNMNHFESFTLDHYKAVFENKRLLVIIVNTLAVALIAASISTVIGICGA
IAIHYMRNKKIKIGLLTLNNILMVSSDVVIGSSFLILFTAIGHFTGLGLGFWSVLISHIAFCVPIVVLLVLPKLYDLNTS
LINASYDLGASTWQTIKNVIIPHILPGALAGFFMALTYSLDDFTVSFFVTGNGFSVLSVEIYSMARKGISMEINAISTLM
FLVVMTIIAIYYVLTTNADKKKLKAGAKS

Sequences:

>Translated_269_residues
MKLRGKLFLAVALFILYFPIFYLMFYSFNSAGNMNHFESFTLDHYKAVFENKRLLVIIVNTLAVALIAASISTVIGICGA
IAIHYMRNKKIKIGLLTLNNILMVSSDVVIGSSFLILFTAIGHFTGLGLGFWSVLISHIAFCVPIVVLLVLPKLYDLNTS
LINASYDLGASTWQTIKNVIIPHILPGALAGFFMALTYSLDDFTVSFFVTGNGFSVLSVEIYSMARKGISMEINAISTLM
FLVVMTIIAIYYVLTTNADKKKLKAGAKS
>Mature_269_residues
MKLRGKLFLAVALFILYFPIFYLMFYSFNSAGNMNHFESFTLDHYKAVFENKRLLVIIVNTLAVALIAASISTVIGICGA
IAIHYMRNKKIKIGLLTLNNILMVSSDVVIGSSFLILFTAIGHFTGLGLGFWSVLISHIAFCVPIVVLLVLPKLYDLNTS
LINASYDLGASTWQTIKNVIIPHILPGALAGFFMALTYSLDDFTVSFFVTGNGFSVLSVEIYSMARKGISMEINAISTLM
FLVVMTIIAIYYVLTTNADKKKLKAGAKS

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=242, Percent_Identity=35.1239669421488, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1787081, Length=251, Percent_Identity=27.8884462151394, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1787714, Length=265, Percent_Identity=27.1698113207547, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29599; Mature: 29599

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRGKLFLAVALFILYFPIFYLMFYSFNSAGNMNHFESFTLDHYKAVFENKRLLVIIVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHH
TLAVALIAASISTVIGICGAIAIHYMRNKKIKIGLLTLNNILMVSSDVVIGSSFLILFTA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEECCHHHHHHHHHHHHH
IGHFTGLGLGFWSVLISHIAFCVPIVVLLVLPKLYDLNTSLINASYDLGASTWQTIKNVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCHHHHHHHHHHH
IPHILPGALAGFFMALTYSLDDFTVSFFVTGNGFSVLSVEIYSMARKGISMEINAISTLM
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHCCCCEEHHHHHHHH
FLVVMTIIAIYYVLTTNADKKKLKAGAKS
HHHHHHHHHHHHHHCCCCCHHHHHCCCCC
>Mature Secondary Structure
MKLRGKLFLAVALFILYFPIFYLMFYSFNSAGNMNHFESFTLDHYKAVFENKRLLVIIVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHH
TLAVALIAASISTVIGICGAIAIHYMRNKKIKIGLLTLNNILMVSSDVVIGSSFLILFTA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEECCHHHHHHHHHHHHH
IGHFTGLGLGFWSVLISHIAFCVPIVVLLVLPKLYDLNTSLINASYDLGASTWQTIKNVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCHHHHHHHHHHH
IPHILPGALAGFFMALTYSLDDFTVSFFVTGNGFSVLSVEIYSMARKGISMEINAISTLM
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHCCCCEEHHHHHHHH
FLVVMTIIAIYYVLTTNADKKKLKAGAKS
HHHHHHHHHHHHHHCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]