| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is purM
Identifier: 222150944
GI number: 222150944
Start: 746738
End: 747760
Strand: Direct
Name: purM
Synonym: MCCL_0694
Alternate gene names: 222150944
Gene position: 746738-747760 (Clockwise)
Preceding gene: 222150943
Following gene: 222150945
Centisome position: 35.52
GC content: 44.38
Gene sequence:
>1023_bases ATGGCTGAAAGTTATAAACAATCAGGCGTTGATATCCATGCTGGGTATGAAGCGGTTGAGCGCATGAAAAAGCATGTGAA CAAGACGATGCGTAAAGAAGTGCTTGGAGGGCTTGGCAGTTTCGGTGCGGCATTCGACCTATCACAGCTGAATATGAAAG CACCTGTTCTCGTTTCAGGTACTGATGGAGTAGGTACGAAATTACGTCTTGCAATCGATAGTGATCGACATGACACAATC GGAATCGATGCAGTGGCTATGTGCGTGAACGATATTTTAACGACAGGTGCGATGCCGTTATACTTCCTTGATTATCTCGC ATTAAATAAAGTGGACCCTGTAATCGTCGAACAGATCGTTAAAGGTGTTGCTGATGGCTGTGCTGAAAGTGAATGTGCAC TGATCGGCGGAGAAACAGCTGAAATGGGCGATATGTATCATACAGGTGATTATGATATCGCTGGCTTTGCTGTCGGGGCT GTCGAGAAGGATGCATATATTACTGGTGAACGTATTGCTGAAGGTGACGTGATATTAGGACTTGCTTCAAGCGGTATTCA CTCAAATGGTTACAGCTTGGTACGTAAGATCATTAAAGATAATAATCTCGATCTAGATGCTGAATTTGATAACGGTAAGA CGCTGCTGGATGTCGTGTTAGAACCAACACGTCTATACGTTAAGAGCGCAAAAGCGATATTGGATGCAGCGGACGTACAC GGTATGTGTCACGTGACCGGCGGCGGCTTTATTGAGAATGTTCCGCGTGTCTTTGTGACTGACGGATTATATCCGGAAAT CGATGTTACAAACATTCCGCGTCAGAAGATCTTTGACTTATTACAGGAAAAAGGCAGCATCGACAAGATGGAGATGTACA ATATCTTCAATATGGGTATCGGATTTATCTTTATCGTACCGAGAGAAGCGGTAGAGAAGGTACGCTCAGCAGTGAACGAA GAAGTATTTGAAATCGGTCGTGTCGTACGCGGTGACAAAGCAATCGACATTAAAGGTGTGTAA
Upstream 100 bases:
>100_bases AAGGCGAATGTAATGCCTGCTTTACTGGGAACTATCCGATTGAAATCGTGGATCATGTATTACCAGAAGAAAAAGACAAG AAGAAGAAGGGAGTATAATT
Downstream 100 bases:
>100_bases TATGATTAAAGTCGCGATATTTGCTTCAGGTAATGGGTCGAATTACGAGAAGATTATGGAGCATATTCAGGCAGGATTCC TGGATCATATTGAAGTGACA
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAESYKQSGVDIHAGYEAVERMKKHVNKTMRKEVLGGLGSFGAAFDLSQLNMKAPVLVSGTDGVGTKLRLAIDSDRHDTI GIDAVAMCVNDILTTGAMPLYFLDYLALNKVDPVIVEQIVKGVADGCAESECALIGGETAEMGDMYHTGDYDIAGFAVGA VEKDAYITGERIAEGDVILGLASSGIHSNGYSLVRKIIKDNNLDLDAEFDNGKTLLDVVLEPTRLYVKSAKAILDAADVH GMCHVTGGGFIENVPRVFVTDGLYPEIDVTNIPRQKIFDLLQEKGSIDKMEMYNIFNMGIGFIFIVPREAVEKVRSAVNE EVFEIGRVVRGDKAIDIKGV
Sequences:
>Translated_340_residues MAESYKQSGVDIHAGYEAVERMKKHVNKTMRKEVLGGLGSFGAAFDLSQLNMKAPVLVSGTDGVGTKLRLAIDSDRHDTI GIDAVAMCVNDILTTGAMPLYFLDYLALNKVDPVIVEQIVKGVADGCAESECALIGGETAEMGDMYHTGDYDIAGFAVGA VEKDAYITGERIAEGDVILGLASSGIHSNGYSLVRKIIKDNNLDLDAEFDNGKTLLDVVLEPTRLYVKSAKAILDAADVH GMCHVTGGGFIENVPRVFVTDGLYPEIDVTNIPRQKIFDLLQEKGSIDKMEMYNIFNMGIGFIFIVPREAVEKVRSAVNE EVFEIGRVVRGDKAIDIKGV >Mature_339_residues AESYKQSGVDIHAGYEAVERMKKHVNKTMRKEVLGGLGSFGAAFDLSQLNMKAPVLVSGTDGVGTKLRLAIDSDRHDTIG IDAVAMCVNDILTTGAMPLYFLDYLALNKVDPVIVEQIVKGVADGCAESECALIGGETAEMGDMYHTGDYDIAGFAVGAV EKDAYITGERIAEGDVILGLASSGIHSNGYSLVRKIIKDNNLDLDAEFDNGKTLLDVVLEPTRLYVKSAKAILDAADVHG MCHVTGGGFIENVPRVFVTDGLYPEIDVTNIPRQKIFDLLQEKGSIDKMEMYNIFNMGIGFIFIVPREAVEKVRSAVNEE VFEIGRVVRGDKAIDIKGV
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family
Homologues:
Organism=Homo sapiens, GI4503915, Length=334, Percent_Identity=46.4071856287425, Blast_Score=298, Evalue=7e-81, Organism=Homo sapiens, GI209869995, Length=334, Percent_Identity=46.4071856287425, Blast_Score=298, Evalue=7e-81, Organism=Homo sapiens, GI209869993, Length=334, Percent_Identity=46.4071856287425, Blast_Score=298, Evalue=7e-81, Organism=Escherichia coli, GI1788845, Length=333, Percent_Identity=50.7507507507508, Blast_Score=326, Evalue=1e-90, Organism=Caenorhabditis elegans, GI17567511, Length=336, Percent_Identity=40.1785714285714, Blast_Score=224, Evalue=6e-59, Organism=Saccharomyces cerevisiae, GI6321203, Length=337, Percent_Identity=42.7299703264095, Blast_Score=259, Evalue=5e-70, Organism=Drosophila melanogaster, GI24582400, Length=314, Percent_Identity=37.8980891719745, Blast_Score=192, Evalue=3e-49,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PUR5_MACCJ (B9EAZ0)
Other databases:
- EMBL: AP009484 - RefSeq: YP_002560097.1 - GeneID: 7389851 - GenomeReviews: AP009484_GR - KEGG: mcl:MCCL_0694 - OMA: GIDMIAM - ProtClustDB: PRK05385 - GO: GO:0005737 - HAMAP: MF_00741_B - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 - TIGRFAMs: TIGR00878
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =6.3.3.1
Molecular weight: Translated: 36787; Mature: 36655
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESYKQSGVDIHAGYEAVERMKKHVNKTMRKEVLGGLGSFGAAFDLSQLNMKAPVLVSG CCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCCCCEEEEC TDGVGTKLRLAIDSDRHDTIGIDAVAMCVNDILTTGAMPLYFLDYLALNKVDPVIVEQIV CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH KGVADGCAESECALIGGETAEMGDMYHTGDYDIAGFAVGAVEKDAYITGERIAEGDVILG HHHHCCCCCCCEEEECCCCHHHCCCEECCCCCCCEEEEECCCCCCEECCCEECCCCEEEE LASSGIHSNGYSLVRKIIKDNNLDLDAEFDNGKTLLDVVLEPTRLYVKSAKAILDAADVH EECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHC GMCHVTGGGFIENVPRVFVTDGLYPEIDVTNIPRQKIFDLLQEKGSIDKMEMYNIFNMGI CEEEECCCHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC GFIFIVPREAVEKVRSAVNEEVFEIGRVVRGDKAIDIKGV EEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure AESYKQSGVDIHAGYEAVERMKKHVNKTMRKEVLGGLGSFGAAFDLSQLNMKAPVLVSG CCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCCCCEEEEC TDGVGTKLRLAIDSDRHDTIGIDAVAMCVNDILTTGAMPLYFLDYLALNKVDPVIVEQIV CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH KGVADGCAESECALIGGETAEMGDMYHTGDYDIAGFAVGAVEKDAYITGERIAEGDVILG HHHHCCCCCCCEEEECCCCHHHCCCEECCCCCCCEEEEECCCCCCEECCCEECCCCEEEE LASSGIHSNGYSLVRKIIKDNNLDLDAEFDNGKTLLDVVLEPTRLYVKSAKAILDAADVH EECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHC GMCHVTGGGFIENVPRVFVTDGLYPEIDVTNIPRQKIFDLLQEKGSIDKMEMYNIFNMGI CEEEECCCHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC GFIFIVPREAVEKVRSAVNEEVFEIGRVVRGDKAIDIKGV EEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA