| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is purN [H]
Identifier: 222150945
GI number: 222150945
Start: 747762
End: 748328
Strand: Direct
Name: purN [H]
Synonym: MCCL_0695
Alternate gene names: 222150945
Gene position: 747762-748328 (Clockwise)
Preceding gene: 222150944
Following gene: 222150946
Centisome position: 35.57
GC content: 44.62
Gene sequence:
>567_bases ATGATTAAAGTCGCGATATTTGCTTCAGGTAATGGGTCGAATTACGAGAAGATTATGGAGCATATTCAGGCAGGATTCCT GGATCATATTGAAGTGACAGGCCTCTATACAGATAAACGTAGCGCGTTCGCAATTGAGCGCGCACGTCGTTTTGATACGC CTGTACACGTATTTGAACTAAAAACGTTTAACGATAAAACAGCATATGAAACAGCGATACTGAAACAATTAAAGCAGGAC GGTGTGGAATGGGTCATTCTTGCCGGCTATATGAAGCTTGTTGGCAGGACGCTGCTCGATGCGTATGAAGGAAAGATGAT CAACATCCATCCGTCGATATTACCAAGCTTTCCTGGTGTTAATGCTGTTGGACAGGCGCTGGATTATGGCTGCCGTGTCA GTGGTGCTACTGTCCATTACGTTGATAGCGGCATGGATACAGGTAAGATCATCGACCAGATGAGCTGTCCGATCTACGAA GAAGATACAGAGGAGACATTGCAGCTCCGAATTCAGAATCTAGAATACGAACTCTACCCGCGCGTCATCAAGAAAATTAT TCGATAA
Upstream 100 bases:
>100_bases GAAGCGGTAGAGAAGGTACGCTCAGCAGTGAACGAAGAAGTATTTGAAATCGGTCGTGTCGTACGCGGTGACAAAGCAAT CGACATTAAAGGTGTGTAAT
Downstream 100 bases:
>100_bases GGAGTCTACTTATGAGAAAAGCATTATTAAGTGTATCAGATAAAACAGGTATTATCCCATTTGCCGAACGTTTAACAGAA CTTGACTTTGAACTTTATTC
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MIKVAIFASGNGSNYEKIMEHIQAGFLDHIEVTGLYTDKRSAFAIERARRFDTPVHVFELKTFNDKTAYETAILKQLKQD GVEWVILAGYMKLVGRTLLDAYEGKMINIHPSILPSFPGVNAVGQALDYGCRVSGATVHYVDSGMDTGKIIDQMSCPIYE EDTEETLQLRIQNLEYELYPRVIKKIIR
Sequences:
>Translated_188_residues MIKVAIFASGNGSNYEKIMEHIQAGFLDHIEVTGLYTDKRSAFAIERARRFDTPVHVFELKTFNDKTAYETAILKQLKQD GVEWVILAGYMKLVGRTLLDAYEGKMINIHPSILPSFPGVNAVGQALDYGCRVSGATVHYVDSGMDTGKIIDQMSCPIYE EDTEETLQLRIQNLEYELYPRVIKKIIR >Mature_188_residues MIKVAIFASGNGSNYEKIMEHIQAGFLDHIEVTGLYTDKRSAFAIERARRFDTPVHVFELKTFNDKTAYETAILKQLKQD GVEWVILAGYMKLVGRTLLDAYEGKMINIHPSILPSFPGVNAVGQALDYGCRVSGATVHYVDSGMDTGKIIDQMSCPIYE EDTEETLQLRIQNLEYELYPRVIKKIIR
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=184, Percent_Identity=32.0652173913043, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI209869995, Length=184, Percent_Identity=32.0652173913043, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI209869993, Length=184, Percent_Identity=32.0652173913043, Blast_Score=119, Evalue=2e-27, Organism=Escherichia coli, GI1788846, Length=183, Percent_Identity=31.1475409836066, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1787483, Length=143, Percent_Identity=31.4685314685315, Blast_Score=68, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17567511, Length=182, Percent_Identity=32.967032967033, Blast_Score=113, Evalue=6e-26, Organism=Drosophila melanogaster, GI24582400, Length=186, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 21282; Mature: 21282
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVAIFASGNGSNYEKIMEHIQAGFLDHIEVTGLYTDKRSAFAIERARRFDTPVHVFEL CEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHCCCCEEEEEE KTFNDKTAYETAILKQLKQDGVEWVILAGYMKLVGRTLLDAYEGKMINIHPSILPSFPGV EECCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCH NAVGQALDYGCRVSGATVHYVDSGMDTGKIIDQMSCPIYEEDTEETLQLRIQNLEYELYP HHHHHHHHCCCEECCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH RVIKKIIR HHHHHHHC >Mature Secondary Structure MIKVAIFASGNGSNYEKIMEHIQAGFLDHIEVTGLYTDKRSAFAIERARRFDTPVHVFEL CEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHCCCCEEEEEE KTFNDKTAYETAILKQLKQDGVEWVILAGYMKLVGRTLLDAYEGKMINIHPSILPSFPGV EECCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCH NAVGQALDYGCRVSGATVHYVDSGMDTGKIIDQMSCPIYEEDTEETLQLRIQNLEYELYP HHHHHHHHCCCEECCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH RVIKKIIR HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA