| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is dltD [H]
Identifier: 222150812
GI number: 222150812
Start: 599802
End: 600956
Strand: Direct
Name: dltD [H]
Synonym: MCCL_0562
Alternate gene names: 222150812
Gene position: 599802-600956 (Clockwise)
Preceding gene: 222150811
Following gene: 222150813
Centisome position: 28.53
GC content: 33.42
Gene sequence:
>1155_bases ATGATTAAAAAGTTCTTACCGGCAATAATTGCCATCAGTCTATTTATAGTTTTTTTAGCCATGCCATCTGACTATATAAA AAGATATATTCCTTTTAAGACAGTAACCGGTGATGGTGTCAATTTAAATGAAATAACATTTAAAGGAAGTGCGATTCAGA CAGAGATGTTCGAAGACAAAAAATTCTATCCGATATTTGGTTCAAGTGAACTTGAGAAAAGAGATCCCTTTCATCCGACG CACATATTCAAGGAGAAGAAATTCGGTAAAATCCCTTTTCTTATTGGTACAGGTGGATCCACTGACCTAATTCACGCCAT TAATATTGGGAGTCATATTGGACATATCGAGAACAAAAAGTTTGCAATTATCATTTCACCGCAATGGTTTACAAAAAAAG GACTGGAAGATAACAATTTTTCTGCACGATATTCTCAATTGCAATTAGACAAACTATTGAGTAATCCAAATATATCTCCA GGCTTAAAGCATAGGATAAGTAAGAGGTTAATGCATTTTTCTGCGACTAAGGATGATGCACAAGTCAATGTGTATGCAAA TAATGAAGCGGATGATAGCGAAGTTTCAGGAGGAATCTATGAAAACCTTATGGAGAAAAATGATATTGTTAAATCAAAGT TCATGATACCTGGAAATCGATTTAAAAAAAGAAAGCACCTTGACCTAGAACATAAATCCTGGGAAGAAATCAGAGATTTA GCAGTGAAATTTGGAAGTAGGCATGCAACTAACAATCCATATTTTATGAGAAATGAATATTTTGATATGATACAAAAACA TCAAAAAAAATTATATCGAAATGGTGAATTTTATATCAACTCTCAAGAATTTAATGATCTACAATTATTGCTTGATATTT TAAAAGAGAGCAAATCAGACCCGATATTTATCTCAATTCCTGCAAATGGAAAATGGTATGATCATATCAATATTCCGCAA TCACAAAGACAGCCAGTATATGATAAAATCAACAAGAAAATCGCTTCAGCTGGTTTTAAACTCTATGATTTAAGTGATAA GGAGTACGAACCATATGTATTAAGCGACGCAGTACATATCGGCTGGAAAGGGTGGGCATATATAGATGAACAGATGGATA ATCACATTCATCATCGTCCGATAACAACCCCATAA
Upstream 100 bases:
>100_bases CATTAAATGATCGATTAGATATGGACCTTACAATCACTGACTTTGATCGTGATGAATGGGCGACACCAAACATGATTGCA GAAGTGTTAGAAGAATTAAG
Downstream 100 bases:
>100_bases GTAAACCGATAAAAATAAAATCCCAAATCAACATCGTTGATTTGGGATTTTATTAAAATACTTGTTCAACTTCAACCACG CCTGGCACTTCTTCAAGTAA
Product: poly glycerophosphate chain D-alanine transfer protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MIKKFLPAIIAISLFIVFLAMPSDYIKRYIPFKTVTGDGVNLNEITFKGSAIQTEMFEDKKFYPIFGSSELEKRDPFHPT HIFKEKKFGKIPFLIGTGGSTDLIHAINIGSHIGHIENKKFAIIISPQWFTKKGLEDNNFSARYSQLQLDKLLSNPNISP GLKHRISKRLMHFSATKDDAQVNVYANNEADDSEVSGGIYENLMEKNDIVKSKFMIPGNRFKKRKHLDLEHKSWEEIRDL AVKFGSRHATNNPYFMRNEYFDMIQKHQKKLYRNGEFYINSQEFNDLQLLLDILKESKSDPIFISIPANGKWYDHINIPQ SQRQPVYDKINKKIASAGFKLYDLSDKEYEPYVLSDAVHIGWKGWAYIDEQMDNHIHHRPITTP
Sequences:
>Translated_384_residues MIKKFLPAIIAISLFIVFLAMPSDYIKRYIPFKTVTGDGVNLNEITFKGSAIQTEMFEDKKFYPIFGSSELEKRDPFHPT HIFKEKKFGKIPFLIGTGGSTDLIHAINIGSHIGHIENKKFAIIISPQWFTKKGLEDNNFSARYSQLQLDKLLSNPNISP GLKHRISKRLMHFSATKDDAQVNVYANNEADDSEVSGGIYENLMEKNDIVKSKFMIPGNRFKKRKHLDLEHKSWEEIRDL AVKFGSRHATNNPYFMRNEYFDMIQKHQKKLYRNGEFYINSQEFNDLQLLLDILKESKSDPIFISIPANGKWYDHINIPQ SQRQPVYDKINKKIASAGFKLYDLSDKEYEPYVLSDAVHIGWKGWAYIDEQMDNHIHHRPITTP >Mature_384_residues MIKKFLPAIIAISLFIVFLAMPSDYIKRYIPFKTVTGDGVNLNEITFKGSAIQTEMFEDKKFYPIFGSSELEKRDPFHPT HIFKEKKFGKIPFLIGTGGSTDLIHAINIGSHIGHIENKKFAIIISPQWFTKKGLEDNNFSARYSQLQLDKLLSNPNISP GLKHRISKRLMHFSATKDDAQVNVYANNEADDSEVSGGIYENLMEKNDIVKSKFMIPGNRFKKRKHLDLEHKSWEEIRDL AVKFGSRHATNNPYFMRNEYFDMIQKHQKKLYRNGEFYINSQEFNDLQLLLDILKESKSDPIFISIPANGKWYDHINIPQ SQRQPVYDKINKKIASAGFKLYDLSDKEYEPYVLSDAVHIGWKGWAYIDEQMDNHIHHRPITTP
Specific function: Could be responsible for the transfer of D-alanine residues from D-Ala-undecaprenol phosphate to the poly(glycerophosphate) chains [H]
COG id: COG3966
COG function: function code M; Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006998 - InterPro: IPR007002 - InterPro: IPR006999 - InterPro: IPR013830 [H]
Pfam domain/function: PF04914 DltD_C; PF04918 DltD_M; PF04915 DltD_N [H]
EC number: NA
Molecular weight: Translated: 44567; Mature: 44567
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKFLPAIIAISLFIVFLAMPSDYIKRYIPFKTVTGDGVNLNEITFKGSAIQTEMFEDK CCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCCCCCCCEEEECCCCEEHHHHCCC KFYPIFGSSELEKRDPFHPTHIFKEKKFGKIPFLIGTGGSTDLIHAINIGSHIGHIENKK CEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCE FAIIISPQWFTKKGLEDNNFSARYSQLQLDKLLSNPNISPGLKHRISKRLMHFSATKDDA EEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC QVNVYANNEADDSEVSGGIYENLMEKNDIVKSKFMIPGNRFKKRKHLDLEHKSWEEIRDL EEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCHHHHHHHH AVKFGSRHATNNPYFMRNEYFDMIQKHQKKLYRNGEFYINSQEFNDLQLLLDILKESKSD HHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCC PIFISIPANGKWYDHINIPQSQRQPVYDKINKKIASAGFKLYDLSDKEYEPYVLSDAVHI CEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEECEEEE GWKGWAYIDEQMDNHIHHRPITTP CCCCEEEEHHHHCCCCCCCCCCCC >Mature Secondary Structure MIKKFLPAIIAISLFIVFLAMPSDYIKRYIPFKTVTGDGVNLNEITFKGSAIQTEMFEDK CCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCCCCCCCEEEECCCCEEHHHHCCC KFYPIFGSSELEKRDPFHPTHIFKEKKFGKIPFLIGTGGSTDLIHAINIGSHIGHIENKK CEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCE FAIIISPQWFTKKGLEDNNFSARYSQLQLDKLLSNPNISPGLKHRISKRLMHFSATKDDA EEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC QVNVYANNEADDSEVSGGIYENLMEKNDIVKSKFMIPGNRFKKRKHLDLEHKSWEEIRDL EEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCHHHHHHHH AVKFGSRHATNNPYFMRNEYFDMIQKHQKKLYRNGEFYINSQEFNDLQLLLDILKESKSD HHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCC PIFISIPANGKWYDHINIPQSQRQPVYDKINKKIASAGFKLYDLSDKEYEPYVLSDAVHI CEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEECEEEE GWKGWAYIDEQMDNHIHHRPITTP CCCCEEEEHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 7797557 [H]