Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

Click here to switch to the map view.

The map label for this gene is yuzD [H]

Identifier: 222150813

GI number: 222150813

Start: 601352

End: 601660

Strand: Direct

Name: yuzD [H]

Synonym: MCCL_0563

Alternate gene names: 222150813

Gene position: 601352-601660 (Clockwise)

Preceding gene: 222150812

Following gene: 222150815

Centisome position: 28.6

GC content: 31.72

Gene sequence:

>309_bases
ATGATAAATGTTATCATCTATGGTGCCGATGTTGTGTGTGCAAGCTGTGTTAATGCACCGACGTCAAAGGATATTTATGA
CTGGATTCAGCCAAATTTAAAACGGAAATTTCCGGAACTCACATTTAATTTTAGCTATATTGATATTAATAATAGTTCTA
ATTTAACTGATCATGATGAAAATATCATTGAACAGATTAACAATGATGAATTATTCTATCCACTGATTACGATGGATGAT
GAAATTGTGGCAGATGGTTATATTCAATTGCCACAAGTAACAAAGTTTGTAGAGCAACATTACTGTTAA

Upstream 100 bases:

>100_bases
AATAACTCCTTTCCAAGAGTATTACTATGTAATTACTCATTTCTTTAGTATAATCAATATAGCATATTTTAATGAAAAAA
TTAAGGGGGATGGCTTATAA

Downstream 100 bases:

>100_bases
GGTATCAAGCATAACATAAGAACCCATCAAATGATGGGTTCTTATGTTATCCATTATGATATTTATATAACCAGAGTACG
CCTGACTTCATCAGTCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MINVIIYGADVVCASCVNAPTSKDIYDWIQPNLKRKFPELTFNFSYIDINNSSNLTDHDENIIEQINNDELFYPLITMDD
EIVADGYIQLPQVTKFVEQHYC

Sequences:

>Translated_102_residues
MINVIIYGADVVCASCVNAPTSKDIYDWIQPNLKRKFPELTFNFSYIDINNSSNLTDHDENIIEQINNDELFYPLITMDD
EIVADGYIQLPQVTKFVEQHYC
>Mature_102_residues
MINVIIYGADVVCASCVNAPTSKDIYDWIQPNLKRKFPELTFNFSYIDINNSSNLTDHDENIIEQINNDELFYPLITMDD
EIVADGYIQLPQVTKFVEQHYC

Specific function: Unknown

COG id: COG4837

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012336
- InterPro:   IPR009190 [H]

Pfam domain/function: PF07315 DUF1462 [H]

EC number: NA

Molecular weight: Translated: 11810; Mature: 11810

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVIIYGADVVCASCVNAPTSKDIYDWIQPNLKRKFPELTFNFSYIDINNSSNLTDHDE
CEEEEEECCHHHHHHHCCCCCCCCHHHHHCCCHHHCCCCEEEEEEEEEECCCCCCCCCHH
NIIEQINNDELFYPLITMDDEIVADGYIQLPQVTKFVEQHYC
HHHHHCCCCCEEEEEEECCCCEECCCEEECHHHHHHHHHCCC
>Mature Secondary Structure
MINVIIYGADVVCASCVNAPTSKDIYDWIQPNLKRKFPELTFNFSYIDINNSSNLTDHDE
CEEEEEECCHHHHHHHCCCCCCCCHHHHHCCCHHHCCCCEEEEEEEEEECCCCCCCCCHH
NIIEQINNDELFYPLITMDDEIVADGYIQLPQVTKFVEQHYC
HHHHHCCCCCEEEEEEECCCCEECCCEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]