Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is ydzA [H]

Identifier: 222150707

GI number: 222150707

Start: 484165

End: 484464

Strand: Direct

Name: ydzA [H]

Synonym: MCCL_0457

Alternate gene names: 222150707

Gene position: 484165-484464 (Clockwise)

Preceding gene: 222150706

Following gene: 222150708

Centisome position: 23.03

GC content: 33.0

Gene sequence:

>300_bases
ATGGGGGATAGTACTTTGAAGAGCGTGTTTAGATTCTTTGGTTTTCTAGAAGGCGGATCGCTCTTATTGTTATTAGGTAT
TGCAATGCCTCTTAAATATTTAGCTGGAAAGCCTGAAGTTGTAACAATAATTGGTTCAATTCATGGGTTTTTATTCACAG
TATATATAATTACATTAATATTAATAACGATTCAGACGAAATGGCCCCTGAAGTGGTCGGTCATCGGTCTTATTGTGGCA
TTTATACCATTTGGTACATTTGTATATGATCATTATTATATTCGTTCAAAATATTATTGA

Upstream 100 bases:

>100_bases
GTTGTATTAGAATCTGAGAATCATCAGATTATCACTGTTGCATTACATAAAGACTTCAATGCTTCAAGAAATAATCCAGA
CGAAGAAGAGGAAGCGTAAT

Downstream 100 bases:

>100_bases
AGCGTGTGAGGCAGGTAATGCCTCAGACGCTTTTACTTTGAAAGGTTGCTGGTTGTATGAGAATTAATAAGTTTTTATCA
GAAGCAGGCATTTGCTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MGDSTLKSVFRFFGFLEGGSLLLLLGIAMPLKYLAGKPEVVTIIGSIHGFLFTVYIITLILITIQTKWPLKWSVIGLIVA
FIPFGTFVYDHYYIRSKYY

Sequences:

>Translated_99_residues
MGDSTLKSVFRFFGFLEGGSLLLLLGIAMPLKYLAGKPEVVTIIGSIHGFLFTVYIITLILITIQTKWPLKWSVIGLIVA
FIPFGTFVYDHYYIRSKYY
>Mature_98_residues
GDSTLKSVFRFFGFLEGGSLLLLLGIAMPLKYLAGKPEVVTIIGSIHGFLFTVYIITLILITIQTKWPLKWSVIGLIVAF
IPFGTFVYDHYYIRSKYY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11244; Mature: 11113

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDSTLKSVFRFFGFLEGGSLLLLLGIAMPLKYLAGKPEVVTIIGSIHGFLFTVYIITLI
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH
LITIQTKWPLKWSVIGLIVAFIPFGTFVYDHYYIRSKYY
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GDSTLKSVFRFFGFLEGGSLLLLLGIAMPLKYLAGKPEVVTIIGSIHGFLFTVYIITLI
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH
LITIQTKWPLKWSVIGLIVAFIPFGTFVYDHYYIRSKYY
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]