| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is graS [H]
Identifier: 222150531
GI number: 222150531
Start: 284241
End: 285137
Strand: Direct
Name: graS [H]
Synonym: MCCL_0281
Alternate gene names: 222150531
Gene position: 284241-285137 (Clockwise)
Preceding gene: 222150530
Following gene: 222150532
Centisome position: 13.52
GC content: 31.44
Gene sequence:
>897_bases ATGGGTTTTATTAAATATAAATTGAATGAAATCATTATTATTATCGTGCTTTCATTATTATTTGGACTAATTATGATGCT TTATAATACTCCTTTAGAAGGCATTGTATTAACTGCAGGTATTATTATATTTTTAGGAATTATTTATTTCAGTTACAGTA TGATGATATATAAAAAAGTGTGTACGGTACAAGAAGAAAATTTACAATTGAAAGAAGAAATTCAGGACATAAGAAATGAA AAGATCGAGTATCAAAGTGAAATAGAGTCATACTTCCTATTGTGGGTTCATCAAATGAAGACACCAATCACTGCTTCAAA ATTGTTGCTGGAAGCTGAAGATATTCAAACAATTTCACAGATGCGTCACGAGATTCTGCAGATTGATAATTATACGAATC TCGCACTCAGTTATCTAAAGCTAATGAATGAAAAGACAGACATGGTTTTTATGGAGGTGCGAATGGATGATTTAATCACC CCTCTCATTAAACGTTACTCAATTCAATTTATTCATAACGATACAAAGCTGCATTACGAAAAAATATACGACAGTGTATT AACTGATGCGAAATGGACTAGTGTGATGATAGAACAAATTTTAAATAATGCACTGAAGTATGCACGCGGTAAAAATATAT GGATCAAATATAGCGAAGCAGAAAATATCTTGTCGGTAAAAGATGATGGCATAGGGATTAATACTTCTGATTTGCCCAAG ATATTTGAAAAAGGCTTCTCCGGATATAATGGTAGATTGAATGATAAATCTAGCGGTATAGGTTTATATATTGTTAAAAC GATTGCGCGAAGAATGAATGTCTCTGTTTCAGTAGAATCTGAATTAGGCAAAGGGACAATTTTTCATATGAAATTCCCGA ACCTTACAAATTTGTAA
Upstream 100 bases:
>100_bases TTGCTGTCAACATGACACGATTACGTAAAAAGCTTCAGAACATTGGGCTTGATAATTTTATTGAAACAAAGAAAAATGTC GGATATCGAGTGGTGAAGTA
Downstream 100 bases:
>100_bases GGTTCATTTTTATCTTTGTAAGAATAGATGAAGGTCAGGAAGTTCACGACCGAGTACAATTTACATATAGATTAAAATTA AAGGAGTGACTTTCATGTTA
Product: sensor histidine kinase
Products: NA
Alternate protein names: Glycopeptide resistance-associated protein S [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MGFIKYKLNEIIIIIVLSLLFGLIMMLYNTPLEGIVLTAGIIIFLGIIYFSYSMMIYKKVCTVQEENLQLKEEIQDIRNE KIEYQSEIESYFLLWVHQMKTPITASKLLLEAEDIQTISQMRHEILQIDNYTNLALSYLKLMNEKTDMVFMEVRMDDLIT PLIKRYSIQFIHNDTKLHYEKIYDSVLTDAKWTSVMIEQILNNALKYARGKNIWIKYSEAENILSVKDDGIGINTSDLPK IFEKGFSGYNGRLNDKSSGIGLYIVKTIARRMNVSVSVESELGKGTIFHMKFPNLTNL
Sequences:
>Translated_298_residues MGFIKYKLNEIIIIIVLSLLFGLIMMLYNTPLEGIVLTAGIIIFLGIIYFSYSMMIYKKVCTVQEENLQLKEEIQDIRNE KIEYQSEIESYFLLWVHQMKTPITASKLLLEAEDIQTISQMRHEILQIDNYTNLALSYLKLMNEKTDMVFMEVRMDDLIT PLIKRYSIQFIHNDTKLHYEKIYDSVLTDAKWTSVMIEQILNNALKYARGKNIWIKYSEAENILSVKDDGIGINTSDLPK IFEKGFSGYNGRLNDKSSGIGLYIVKTIARRMNVSVSVESELGKGTIFHMKFPNLTNL >Mature_297_residues GFIKYKLNEIIIIIVLSLLFGLIMMLYNTPLEGIVLTAGIIIFLGIIYFSYSMMIYKKVCTVQEENLQLKEEIQDIRNEK IEYQSEIESYFLLWVHQMKTPITASKLLLEAEDIQTISQMRHEILQIDNYTNLALSYLKLMNEKTDMVFMEVRMDDLITP LIKRYSIQFIHNDTKLHYEKIYDSVLTDAKWTSVMIEQILNNALKYARGKNIWIKYSEAENILSVKDDGIGINTSDLPKI FEKGFSGYNGRLNDKSSGIGLYIVKTIARRMNVSVSVESELGKGTIFHMKFPNLTNL
Specific function: Member of the two-component regulatory system graR/graS involved in resistance against cationic antimicrobial peptides (CAMPs). GraS probably functions as a sensor protein kinase which is autophosphorylated at a histidine residue and transfers its phospha
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 34532; Mature: 34401
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFIKYKLNEIIIIIVLSLLFGLIMMLYNTPLEGIVLTAGIIIFLGIIYFSYSMMIYKKV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTVQEENLQLKEEIQDIRNEKIEYQSEIESYFLLWVHQMKTPITASKLLLEAEDIQTISQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MRHEILQIDNYTNLALSYLKLMNEKTDMVFMEVRMDDLITPLIKRYSIQFIHNDTKLHYE HHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHEEHEEECCCHHHHH KIYDSVLTDAKWTSVMIEQILNNALKYARGKNIWIKYSEAENILSVKDDGIGINTSDLPK HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCHHHHH IFEKGFSGYNGRLNDKSSGIGLYIVKTIARRMNVSVSVESELGKGTIFHMKFPNLTNL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCC >Mature Secondary Structure GFIKYKLNEIIIIIVLSLLFGLIMMLYNTPLEGIVLTAGIIIFLGIIYFSYSMMIYKKV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTVQEENLQLKEEIQDIRNEKIEYQSEIESYFLLWVHQMKTPITASKLLLEAEDIQTISQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MRHEILQIDNYTNLALSYLKLMNEKTDMVFMEVRMDDLITPLIKRYSIQFIHNDTKLHYE HHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHEEHEEECCCHHHHH KIYDSVLTDAKWTSVMIEQILNNALKYARGKNIWIKYSEAENILSVKDDGIGINTSDLPK HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCHHHHH IFEKGFSGYNGRLNDKSSGIGLYIVKTIARRMNVSVSVESELGKGTIFHMKFPNLTNL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA