Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is 222111154

Identifier: 222111154

GI number: 222111154

Start: 2098309

End: 2099679

Strand: Direct

Name: 222111154

Synonym: Dtpsy_1962

Alternate gene names: NA

Gene position: 2098309-2099679 (Clockwise)

Preceding gene: 222111151

Following gene: 222111157

Centisome position: 55.27

GC content: 67.61

Gene sequence:

>1371_bases
ATGCGGCTTAAGTGGTTGATTCGTAACGCCCGCCCCTGCACCGCCTCATTTTTAAGCAGGCTGCGCTACCGCGGAGAAAT
CCCCACGGCCACGCGGTCCGGGCTTTGGGGACATGATGCGCCCTGCCCTGATTGCGGCACCGCCCACTGCATGACCACAC
CCTGCCCTGCCAGCACGCCTGCTTACGCATTGCACCTGCACGACTCGATCCATCGCGTGGGCGCCGATGCATGGGACGCA
CTGCTGGCGCTCCAGCCCCACCCCACGCCCTTCCTGCGCCATGCCTACCTGTGCGCGCTCGAAGACAGCGGCAGCGCCAC
GCCCGCCCGGGGCTGGACGCCCGTCGTGTTCACCCTGTGGGCGGGCACGGACCTGCAGGCAGCCTGCATCGTGTACGCCA
AGGCGCACTCGTACGGTGAGTACGTGTTCGATTGGGCCTGGGCCGATGCCTACGCCCGCCACGGGCTGGCGTACTACCCC
AAGGCCGTGGCCGCCGTGCCGTTCACGCCGGTGCCCGGCACCCGGCTGATGGCCTGCGACGATGCCGCGCGGGACGCCCT
GCTGCGCGCCGTGCTGGACTGGGCGAAGCAGGCGGAGCTGTCGTCCCTGCACCTGCTGTTCGGCGCGCAGCAGGATCTGG
CTGCAGCGCACCAGGCGGGGATGCTGCTGCGCAGCACCGTGCAGTTCCACTGGCACAACCGGCGGCCCATGGACGGTGCA
AGGTTCGCGGATTTCGAGGACTTCCTCGCCTCCCTGAACCAGGACAAGCGCAAGAAGATCCGCCAGGAGCGCCGGCGCGT
GGCCCAGGCGGGGGTGTGCTTTCGCGTGCTGCGGGGCACGCAGATCACCACAGCAGACTGGGACTTCTTCTACCGCTGCT
ACGAGCGCACCTACCTGGAGCACGGCAATCCGCCCTACCTGACGCGGGCCTTCTTCCACGCCATGCAGCAGCACATGCCC
GAGGCCTGGGTGCTTTTCGTGGCGGAGCGCGCGGGCCGCCCCATTGCTACCAGTTTGATAGCTGTTGGCGCTTATCCCAA
CTGCGTAAACACCCCAAATGACATGCAATCCGTGGCCTATGGCCGCTACTGGGGTGCGCTAGAACGGGTGGACTGCCTGC
ATTTCGAGGCCTGCTACTACCAGCCCATCGAGTGGTGCATCGCGCAGGGTGTGCACCGTTTCGAAGGCGGTGCGCAGGGC
GAACACAAGATGGCCCGCGCCCTCCTGCCCGTGCGCGCGCAGAGCGCCCACTGGCTGGCGCACCCGGCGTTTGCCGAAGC
CGTGGACCGGTTCCTGGCGCGTGAAGGCGAAGGCGTGGAGCACTACCTGGAGGATCTGCACGCGCGCAACCCCTTCCGTC
GGGCAGGCTGA

Upstream 100 bases:

>100_bases
GCCCCGAGCCGCGCCTTGCCCCTGCGGCACGCCCCGGCTGCGCGCTTGTCCCCACAGGCCAGGGACAGGCCTGTGGATAA
GCTGCGGGCGAGGCGGGCAC

Downstream 100 bases:

>100_bases
CGGGCTGGACGCGGCCATGAAAAAGCGCGCCCATGGGCGCGCTTGGCAGAGATACAGCGAGAAGGCCCTCAGGCCGTCGC
GACCGACTGCACCAATCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MRLKWLIRNARPCTASFLSRLRYRGEIPTATRSGLWGHDAPCPDCGTAHCMTTPCPASTPAYALHLHDSIHRVGADAWDA
LLALQPHPTPFLRHAYLCALEDSGSATPARGWTPVVFTLWAGTDLQAACIVYAKAHSYGEYVFDWAWADAYARHGLAYYP
KAVAAVPFTPVPGTRLMACDDAARDALLRAVLDWAKQAELSSLHLLFGAQQDLAAAHQAGMLLRSTVQFHWHNRRPMDGA
RFADFEDFLASLNQDKRKKIRQERRRVAQAGVCFRVLRGTQITTADWDFFYRCYERTYLEHGNPPYLTRAFFHAMQQHMP
EAWVLFVAERAGRPIATSLIAVGAYPNCVNTPNDMQSVAYGRYWGALERVDCLHFEACYYQPIEWCIAQGVHRFEGGAQG
EHKMARALLPVRAQSAHWLAHPAFAEAVDRFLAREGEGVEHYLEDLHARNPFRRAG

Sequences:

>Translated_456_residues
MRLKWLIRNARPCTASFLSRLRYRGEIPTATRSGLWGHDAPCPDCGTAHCMTTPCPASTPAYALHLHDSIHRVGADAWDA
LLALQPHPTPFLRHAYLCALEDSGSATPARGWTPVVFTLWAGTDLQAACIVYAKAHSYGEYVFDWAWADAYARHGLAYYP
KAVAAVPFTPVPGTRLMACDDAARDALLRAVLDWAKQAELSSLHLLFGAQQDLAAAHQAGMLLRSTVQFHWHNRRPMDGA
RFADFEDFLASLNQDKRKKIRQERRRVAQAGVCFRVLRGTQITTADWDFFYRCYERTYLEHGNPPYLTRAFFHAMQQHMP
EAWVLFVAERAGRPIATSLIAVGAYPNCVNTPNDMQSVAYGRYWGALERVDCLHFEACYYQPIEWCIAQGVHRFEGGAQG
EHKMARALLPVRAQSAHWLAHPAFAEAVDRFLAREGEGVEHYLEDLHARNPFRRAG
>Mature_456_residues
MRLKWLIRNARPCTASFLSRLRYRGEIPTATRSGLWGHDAPCPDCGTAHCMTTPCPASTPAYALHLHDSIHRVGADAWDA
LLALQPHPTPFLRHAYLCALEDSGSATPARGWTPVVFTLWAGTDLQAACIVYAKAHSYGEYVFDWAWADAYARHGLAYYP
KAVAAVPFTPVPGTRLMACDDAARDALLRAVLDWAKQAELSSLHLLFGAQQDLAAAHQAGMLLRSTVQFHWHNRRPMDGA
RFADFEDFLASLNQDKRKKIRQERRRVAQAGVCFRVLRGTQITTADWDFFYRCYERTYLEHGNPPYLTRAFFHAMQQHMP
EAWVLFVAERAGRPIATSLIAVGAYPNCVNTPNDMQSVAYGRYWGALERVDCLHFEACYYQPIEWCIAQGVHRFEGGAQG
EHKMARALLPVRAQSAHWLAHPAFAEAVDRFLAREGEGVEHYLEDLHARNPFRRAG

Specific function: Unknown

COG id: COG3146

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51393; Mature: 51393

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKWLIRNARPCTASFLSRLRYRGEIPTATRSGLWGHDAPCPDCGTAHCMTTPCPASTP
CCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AYALHLHDSIHRVGADAWDALLALQPHPTPFLRHAYLCALEDSGSATPARGWTPVVFTLW
CEEEEEHHHHHHHCCHHHHHHEECCCCCCHHHHHHEEEEECCCCCCCCCCCCCCEEEEEE
AGTDLQAACIVYAKAHSYGEYVFDWAWADAYARHGLAYYPKAVAAVPFTPVPGTRLMACD
CCCCCCEEHEEEEHHCCCCCHHHHHHHHHHHHHCCCHHCCCHHHCCCCCCCCCCEEEECC
DAARDALLRAVLDWAKQAELSSLHLLFGAQQDLAAAHQAGMLLRSTVQFHWHNRRPMDGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RFADFEDFLASLNQDKRKKIRQERRRVAQAGVCFRVLRGTQITTADWDFFYRCYERTYLE
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
HGNPPYLTRAFFHAMQQHMPEAWVLFVAERAGRPIATSLIAVGAYPNCVNTPNDMQSVAY
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHH
GRYWGALERVDCLHFEACYYQPIEWCIAQGVHRFEGGAQGEHKMARALLPVRAQSAHWLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHC
HPAFAEAVDRFLAREGEGVEHYLEDLHARNPFRRAG
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRLKWLIRNARPCTASFLSRLRYRGEIPTATRSGLWGHDAPCPDCGTAHCMTTPCPASTP
CCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AYALHLHDSIHRVGADAWDALLALQPHPTPFLRHAYLCALEDSGSATPARGWTPVVFTLW
CEEEEEHHHHHHHCCHHHHHHEECCCCCCHHHHHHEEEEECCCCCCCCCCCCCCEEEEEE
AGTDLQAACIVYAKAHSYGEYVFDWAWADAYARHGLAYYPKAVAAVPFTPVPGTRLMACD
CCCCCCEEHEEEEHHCCCCCHHHHHHHHHHHHHCCCHHCCCHHHCCCCCCCCCCEEEECC
DAARDALLRAVLDWAKQAELSSLHLLFGAQQDLAAAHQAGMLLRSTVQFHWHNRRPMDGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RFADFEDFLASLNQDKRKKIRQERRRVAQAGVCFRVLRGTQITTADWDFFYRCYERTYLE
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
HGNPPYLTRAFFHAMQQHMPEAWVLFVAERAGRPIATSLIAVGAYPNCVNTPNDMQSVAY
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHH
GRYWGALERVDCLHFEACYYQPIEWCIAQGVHRFEGGAQGEHKMARALLPVRAQSAHWLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHC
HPAFAEAVDRFLAREGEGVEHYLEDLHARNPFRRAG
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA