Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222111151

Identifier: 222111151

GI number: 222111151

Start: 2095438

End: 2096031

Strand: Direct

Name: 222111151

Synonym: Dtpsy_1959

Alternate gene names: NA

Gene position: 2095438-2096031 (Clockwise)

Preceding gene: 222111150

Following gene: 222111154

Centisome position: 55.19

GC content: 66.67

Gene sequence:

>594_bases
ATGGCTGATGTCGCTTTTTCGATCTGCGTGTACCTGGGCTCTCGCCCGGGCAACAACCCCTTGTTCACAGAAGCGGCCAC
GGCCGTGGGCCACTGGATAGGCCGCCACGGCGGCCAGTTGGTCTACGGCGGCGGCCGCAGCGGCCTCATGGGCACGGTGG
CGGAGGCCACGCGCGTGGCAGGCGGCCGGGTCGTGGGCATCATTCCGCAGGCTCTCGTGGACAAGGAACTGGCCAACCAC
TTCTGCGATGAGCTGCACATCGTGCAGACCATGCACGAGCGCAAGGCCATGATGGCCGAGCGCAGCGATGCCTTCGTCGC
CCTGCCGGGCGGCATCGGCACACTGGAAGAGCTGTTCGAAGTCTGGACCTGGCGCCAGCTGGGCTACCACGACAAGCCTA
TCGGCCTGTTGGACACCGACGGCTACTACGGCGGCATGCTGGGCTTCCTGCAGCATGCGGTACATGGCGGGCTCATGGGG
GAATGGCAGATGGGCCTGATCCGCGTGGGTACGGAGCCCGATGCCCTGCTCACCGCGCTGGTACAGGACGCAGGCGCGAA
TGCCAGCGCCATCCCCCTGCGCAGCGTGATCTGA

Upstream 100 bases:

>100_bases
CTGTCCAAGCGCGCCAAGGACTTGGGCAGCGCAGCGGTGCTGCTCAGCCTGCTGCTGTGCGCAGCCGTGTGGGCGGCCGC
GCTCTACCAAAGGTTCCTAC

Downstream 100 bases:

>100_bases
CGGCTGTCCCACCGCGCTGGCGTGCGCGGGATTGGCAGACGTGCCGTTCGTTACACCGCGGCGTCGTCCAGGTCGCCGGT
GCGGATGCGCACCACGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MADVAFSICVYLGSRPGNNPLFTEAATAVGHWIGRHGGQLVYGGGRSGLMGTVAEATRVAGGRVVGIIPQALVDKELANH
FCDELHIVQTMHERKAMMAERSDAFVALPGGIGTLEELFEVWTWRQLGYHDKPIGLLDTDGYYGGMLGFLQHAVHGGLMG
EWQMGLIRVGTEPDALLTALVQDAGANASAIPLRSVI

Sequences:

>Translated_197_residues
MADVAFSICVYLGSRPGNNPLFTEAATAVGHWIGRHGGQLVYGGGRSGLMGTVAEATRVAGGRVVGIIPQALVDKELANH
FCDELHIVQTMHERKAMMAERSDAFVALPGGIGTLEELFEVWTWRQLGYHDKPIGLLDTDGYYGGMLGFLQHAVHGGLMG
EWQMGLIRVGTEPDALLTALVQDAGANASAIPLRSVI
>Mature_196_residues
ADVAFSICVYLGSRPGNNPLFTEAATAVGHWIGRHGGQLVYGGGRSGLMGTVAEATRVAGGRVVGIIPQALVDKELANHF
CDELHIVQTMHERKAMMAERSDAFVALPGGIGTLEELFEVWTWRQLGYHDKPIGLLDTDGYYGGMLGFLQHAVHGGLMGE
WQMGLIRVGTEPDALLTALVQDAGANASAIPLRSVI

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=200, Percent_Identity=39, Blast_Score=138, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 21025; Mature: 20894

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVAFSICVYLGSRPGNNPLFTEAATAVGHWIGRHGGQLVYGGGRSGLMGTVAEATRVA
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHC
GGRVVGIIPQALVDKELANHFCDELHIVQTMHERKAMMAERSDAFVALPGGIGTLEELFE
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHH
VWTWRQLGYHDKPIGLLDTDGYYGGMLGFLQHAVHGGLMGEWQMGLIRVGTEPDALLTAL
HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHH
VQDAGANASAIPLRSVI
HHHCCCCCCCCCHHHCC
>Mature Secondary Structure 
ADVAFSICVYLGSRPGNNPLFTEAATAVGHWIGRHGGQLVYGGGRSGLMGTVAEATRVA
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHC
GGRVVGIIPQALVDKELANHFCDELHIVQTMHERKAMMAERSDAFVALPGGIGTLEELFE
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHH
VWTWRQLGYHDKPIGLLDTDGYYGGMLGFLQHAVHGGLMGEWQMGLIRVGTEPDALLTAL
HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHH
VQDAGANASAIPLRSVI
HHHCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]