| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is caiD [C]
Identifier: 222111134
GI number: 222111134
Start: 2077711
End: 2078478
Strand: Direct
Name: caiD [C]
Synonym: Dtpsy_1942
Alternate gene names: 222111134
Gene position: 2077711-2078478 (Clockwise)
Preceding gene: 222111133
Following gene: 222111135
Centisome position: 54.73
GC content: 69.53
Gene sequence:
>768_bases ATGCCCGCCGAACTGCAAAGCACCAGCCAGGGCCAGACCCTGGTCCTGACCCTTCGCCACCCCGAGCTGCGCAATGCCCT GGAGCCGGCCATCTGCGCGGCGGGCATCGAAGCCCTGAACGTGGCGGAGCGCAATCCCGATGTGCGCTGCGTGGTCATCA CGGGCGCGGACGGCCTGTTCAGCGCCGGCAACAGCCCCCAGCGGCTGCAGGCGTTGCGGCATCAGAGCGCGCCAGCGCAG GTGCATGGCCTGGATCTGCTGCACCACTGGATAGAGGCGATACGCACCCATCCCAAGCCCGTGATCGCCGCCGTGGAGGG TGAAGCCAAGGGTGCGGGGTTTTCACTCGCGCTGGCATGCGACCTGATGGTGGCCGCGCGCAACGCGGTGTTTGCCATGA ACCATGTCCACGCGGGCCTGTCGCCCGATGGCGGCGCCAGCTGGAGCCTGGCGCAAATGCTGCCCCGCGCGCTGGCGCAT GAGATCCTGATGTGCGGCGACCGCATCGACGCCGCACGACTGCAGTCCCTGGGCATGGTCAACCGGCTGGCCGATCCCGG GCGCGCCCTGCATGAGGCGCTGGCGCTGGCCCAGCGCCTGAACGATGGCCCGCCCCATGCGCTGGCGAGCATCAAGGAAC TGGTGGGCGAGGCGCGGCACCACAGCTTCACCGAACAGCTCGCGCTGGAGCGCAGCCACTTCGTGCGCAACCTCCAGCAT GCCCTGGCGGGCGAAACCCGGGCGGCTTCTGCCGACCCACGCGCTTAA
Upstream 100 bases:
>100_bases GACCCGCGCTACCGCCCCAGCCCCTGGCTGCGCCGGCGCGGCGCCATCGGCCTGAGCCTGACGCACGAAGAACCCTGACC CTGCCACCACCCGCGCCGCC
Downstream 100 bases:
>100_bases AGCTACTATTTTTATAGCTGCTAGCGCTTGACGGTCAAGCGCCGGCGGCTTGTCTCATTCAAACCCATCCATGGCATTGC TGGCTCCGCGGCAGCGGCGC
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MPAELQSTSQGQTLVLTLRHPELRNALEPAICAAGIEALNVAERNPDVRCVVITGADGLFSAGNSPQRLQALRHQSAPAQ VHGLDLLHHWIEAIRTHPKPVIAAVEGEAKGAGFSLALACDLMVAARNAVFAMNHVHAGLSPDGGASWSLAQMLPRALAH EILMCGDRIDAARLQSLGMVNRLADPGRALHEALALAQRLNDGPPHALASIKELVGEARHHSFTEQLALERSHFVRNLQH ALAGETRAASADPRA
Sequences:
>Translated_255_residues MPAELQSTSQGQTLVLTLRHPELRNALEPAICAAGIEALNVAERNPDVRCVVITGADGLFSAGNSPQRLQALRHQSAPAQ VHGLDLLHHWIEAIRTHPKPVIAAVEGEAKGAGFSLALACDLMVAARNAVFAMNHVHAGLSPDGGASWSLAQMLPRALAH EILMCGDRIDAARLQSLGMVNRLADPGRALHEALALAQRLNDGPPHALASIKELVGEARHHSFTEQLALERSHFVRNLQH ALAGETRAASADPRA >Mature_254_residues PAELQSTSQGQTLVLTLRHPELRNALEPAICAAGIEALNVAERNPDVRCVVITGADGLFSAGNSPQRLQALRHQSAPAQV HGLDLLHHWIEAIRTHPKPVIAAVEGEAKGAGFSLALACDLMVAARNAVFAMNHVHAGLSPDGGASWSLAQMLPRALAHE ILMCGDRIDAARLQSLGMVNRLADPGRALHEALALAQRLNDGPPHALASIKELVGEARHHSFTEQLALERSHFVRNLQHA LAGETRAASADPRA
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=224, Percent_Identity=30.8035714285714, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI70995211, Length=231, Percent_Identity=31.1688311688312, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI4757966, Length=203, Percent_Identity=28.0788177339901, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI51538581, Length=203, Percent_Identity=28.0788177339901, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI25453481, Length=203, Percent_Identity=28.0788177339901, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI51538573, Length=203, Percent_Identity=28.0788177339901, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI4757968, Length=203, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI49355787, Length=203, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI68989263, Length=196, Percent_Identity=33.1632653061224, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI45643119, Length=212, Percent_Identity=25, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI260275230, Length=212, Percent_Identity=25, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI260274832, Length=212, Percent_Identity=25, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI31542718, Length=188, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI116235487, Length=186, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI157694516, Length=221, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI213417737, Length=221, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI221142681, Length=244, Percent_Identity=34.0163934426229, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1787659, Length=233, Percent_Identity=30.9012875536481, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787660, Length=224, Percent_Identity=33.0357142857143, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788597, Length=199, Percent_Identity=30.6532663316583, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI87082183, Length=209, Percent_Identity=25.8373205741627, Blast_Score=71, Evalue=8e-14, Organism=Caenorhabditis elegans, GI25145438, Length=241, Percent_Identity=28.6307053941909, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17554946, Length=239, Percent_Identity=28.0334728033473, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17540714, Length=241, Percent_Identity=26.1410788381743, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17560910, Length=226, Percent_Identity=23.0088495575221, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17535521, Length=215, Percent_Identity=24.1860465116279, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17536985, Length=210, Percent_Identity=24.2857142857143, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17549921, Length=213, Percent_Identity=26.2910798122066, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI20129971, Length=240, Percent_Identity=27.9166666666667, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI24653477, Length=240, Percent_Identity=27.9166666666667, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI24653139, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI19920382, Length=225, Percent_Identity=27.5555555555556, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI19922422, Length=242, Percent_Identity=26.8595041322314, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 27153; Mature: 27022
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAELQSTSQGQTLVLTLRHPELRNALEPAICAAGIEALNVAERNPDVRCVVITGADGLF CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC SAGNSPQRLQALRHQSAPAQVHGLDLLHHWIEAIRTHPKPVIAAVEGEAKGAGFSLALAC CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH DLMVAARNAVFAMNHVHAGLSPDGGASWSLAQMLPRALAHEILMCGDRIDAARLQSLGMV HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NRLADPGRALHEALALAQRLNDGPPHALASIKELVGEARHHSFTEQLALERSHFVRNLQH HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAGETRAASADPRA HHCCCCCCCCCCCCC >Mature Secondary Structure PAELQSTSQGQTLVLTLRHPELRNALEPAICAAGIEALNVAERNPDVRCVVITGADGLF CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC SAGNSPQRLQALRHQSAPAQVHGLDLLHHWIEAIRTHPKPVIAAVEGEAKGAGFSLALAC CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH DLMVAARNAVFAMNHVHAGLSPDGGASWSLAQMLPRALAHEILMCGDRIDAARLQSLGMV HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NRLADPGRALHEALALAQRLNDGPPHALASIKELVGEARHHSFTEQLALERSHFVRNLQH HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAGETRAASADPRA HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA