| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222111078
Identifier: 222111078
GI number: 222111078
Start: 2007538
End: 2008608
Strand: Direct
Name: 222111078
Synonym: Dtpsy_1885
Alternate gene names: NA
Gene position: 2007538-2008608 (Clockwise)
Preceding gene: 222111076
Following gene: 222111079
Centisome position: 52.88
GC content: 64.24
Gene sequence:
>1071_bases GTGCCCCTCCCCTCACCCACGACCCATCTCACCCCTGAGGAGTCCGCGTTCCACGCGTTCTATGCGCAGGAGCGCCCGGC GCTGGACCACGCCTGCGCGTTTTACATGGCGCTGCTGCAGTCGCTGCTGTCGCAGGCGCGCCACATCGACATTGCCAAGA TCGAAGGGCGCGTGAAGGACCGCGATGAATGCCTGCGCAAGTTTTCGCGCAAGTACCGCGCGGCGCTGGAGGAAAGCGGG GCCCCCTATGAAATCCGCCCCTACATCACCGACCTGATCGGCGTGCGCGTGGTCTGCCTGTACGAGGACGAGTTGGAGAA GGTGGCGCAGATCGTCCAGTCGCACTTCGACGTGATCGACGTGACCGACAAGGTCAGCGCCCTGGAGGGCACCGAGGCCT CTTTCGGCTACAAGGGCCTGCACCTGGACCTGCGGCTCAACGCCGTGCAAGCCGCCCTACCCGAGAACGCCGCCTACGCG GCGCAGCCGTTCGAGCTGCAGGTGCGCACCATCATCCAGGACGCGTGGAGCGTGCTGGACCACAAGATCAAGTACAAGAA GTCGATTCCGGCCGAACTCAAGCGCCGCATCAACGTGCTGTCCGCCCTGTTCGAACTGGCGGACCGCGAGTTCCGCCAGA TCCGCGATGCCACCGATGCCGAACTGCTCTACGCACCCGACGAGACCACCGAGGCCGAGACCGAAGCCAGCCGAATGCCG GCGCCCGGCAGCGAGCTCAACGCCTTCACGTTCCTGAAGATTGCCCGCCATTTCTTCAAAGACGTGGAGTTCGACGCGCA GAAGGTGGACCTGTTCGTGGACGACATGCGCGCATGGTCACCGGGCATCACGCGTGCCCGCTTCAACACCCTGATGCGCG AAACGATTGCCACCGTCAAGCGCTACAAGCAGTTCTACGAGGCGCAGAACCCCGAGGGCAGCTTCAACCCCTTCACCGTG ATCCGCCACTGCCTGTACCTGGGCGACCGGCAGGCGTTTCGCCGCGCGCTGCGCAACAGCTCGCGCGAAGCCTTCGAAGC GTGGCTGCAGGAAAATCCCACCCTGATATAA
Upstream 100 bases:
>100_bases CCCGTCTGTGGGACGCGGCCTTGTCCTACCCCGCCGAGGGCCACCGCAGGCCCTTTCCTGCCCTACCATCCGTGGCTGTC CCTTGACCCCTGCGTCTGCC
Downstream 100 bases:
>100_bases GTCAAATCGACCTCCAGCGCTTGTCCATCAAGCGCTGACAGCTATCAAAAGCATTGCATCAAGCCCGCCCGCCAATGTCG CGCGCGGGACACTGAATGCG
Product: rela/spot domain-containing protein
Products: NA
Alternate protein names: RelA/SpoT Domain Protein; GTP Pyrophosphokinase; Region Found In RelA / SpoT Proteins; RelA/SpoT; Rela/Spot Domain Protein
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MPLPSPTTHLTPEESAFHAFYAQERPALDHACAFYMALLQSLLSQARHIDIAKIEGRVKDRDECLRKFSRKYRAALEESG APYEIRPYITDLIGVRVVCLYEDELEKVAQIVQSHFDVIDVTDKVSALEGTEASFGYKGLHLDLRLNAVQAALPENAAYA AQPFELQVRTIIQDAWSVLDHKIKYKKSIPAELKRRINVLSALFELADREFRQIRDATDAELLYAPDETTEAETEASRMP APGSELNAFTFLKIARHFFKDVEFDAQKVDLFVDDMRAWSPGITRARFNTLMRETIATVKRYKQFYEAQNPEGSFNPFTV IRHCLYLGDRQAFRRALRNSSREAFEAWLQENPTLI
Sequences:
>Translated_356_residues MPLPSPTTHLTPEESAFHAFYAQERPALDHACAFYMALLQSLLSQARHIDIAKIEGRVKDRDECLRKFSRKYRAALEESG APYEIRPYITDLIGVRVVCLYEDELEKVAQIVQSHFDVIDVTDKVSALEGTEASFGYKGLHLDLRLNAVQAALPENAAYA AQPFELQVRTIIQDAWSVLDHKIKYKKSIPAELKRRINVLSALFELADREFRQIRDATDAELLYAPDETTEAETEASRMP APGSELNAFTFLKIARHFFKDVEFDAQKVDLFVDDMRAWSPGITRARFNTLMRETIATVKRYKQFYEAQNPEGSFNPFTV IRHCLYLGDRQAFRRALRNSSREAFEAWLQENPTLI >Mature_355_residues PLPSPTTHLTPEESAFHAFYAQERPALDHACAFYMALLQSLLSQARHIDIAKIEGRVKDRDECLRKFSRKYRAALEESGA PYEIRPYITDLIGVRVVCLYEDELEKVAQIVQSHFDVIDVTDKVSALEGTEASFGYKGLHLDLRLNAVQAALPENAAYAA QPFELQVRTIIQDAWSVLDHKIKYKKSIPAELKRRINVLSALFELADREFRQIRDATDAELLYAPDETTEAETEASRMPA PGSELNAFTFLKIARHFFKDVEFDAQKVDLFVDDMRAWSPGITRARFNTLMRETIATVKRYKQFYEAQNPEGSFNPFTVI RHCLYLGDRQAFRRALRNSSREAFEAWLQENPTLI
Specific function: Unknown
COG id: COG2357
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40844; Mature: 40713
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPSPTTHLTPEESAFHAFYAQERPALDHACAFYMALLQSLLSQARHIDIAKIEGRVKD CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC RDECLRKFSRKYRAALEESGAPYEIRPYITDLIGVRVVCLYEDELEKVAQIVQSHFDVID HHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCEEE VTDKVSALEGTEASFGYKGLHLDLRLNAVQAALPENAAYAAQPFELQVRTIIQDAWSVLD HHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH HKIKYKKSIPAELKRRINVLSALFELADREFRQIRDATDAELLYAPDETTEAETEASRMP HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCC APGSELNAFTFLKIARHFFKDVEFDAQKVDLFVDDMRAWSPGITRARFNTLMRETIATVK CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RYKQFYEAQNPEGSFNPFTVIRHCLYLGDRQAFRRALRNSSREAFEAWLQENPTLI HHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCC >Mature Secondary Structure PLPSPTTHLTPEESAFHAFYAQERPALDHACAFYMALLQSLLSQARHIDIAKIEGRVKD CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC RDECLRKFSRKYRAALEESGAPYEIRPYITDLIGVRVVCLYEDELEKVAQIVQSHFDVID HHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCEEE VTDKVSALEGTEASFGYKGLHLDLRLNAVQAALPENAAYAAQPFELQVRTIIQDAWSVLD HHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH HKIKYKKSIPAELKRRINVLSALFELADREFRQIRDATDAELLYAPDETTEAETEASRMP HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCC APGSELNAFTFLKIARHFFKDVEFDAQKVDLFVDDMRAWSPGITRARFNTLMRETIATVK CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RYKQFYEAQNPEGSFNPFTVIRHCLYLGDRQAFRRALRNSSREAFEAWLQENPTLI HHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA