| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is argK [C]
Identifier: 222111043
GI number: 222111043
Start: 1970417
End: 1971445
Strand: Direct
Name: argK [C]
Synonym: Dtpsy_1850
Alternate gene names: 222111043
Gene position: 1970417-1971445 (Clockwise)
Preceding gene: 222111042
Following gene: 222111044
Centisome position: 51.9
GC content: 68.32
Gene sequence:
>1029_bases GTGACCCCCCAGCAGCTGCAAGAAGGCATCCTGCACGGCGCGCCCGCCGTGCGGCGCCGCGCCATGGCCAAGGCCATCAC GCTGCTGGAATCCACGCGGGCCGACCATCGCACGCAGGGCGACGAACTGCTCACCGCGCTGCTGCCGCACACGGGCCGGG CGTTTCGCCTCGGCATCAGCGGCGTGCCTGGCGTGGGCAAGAGCACCTTCATCGAAGCCTTGGGCCTGCACCTGATCGCA CAAGGCCTGAAGGTGGCGGTGCTGGCCATCGACCCGTCATCCACCGTCTCGGGCGGCTCCATCCTCGGTGACAAGACGCG CATGGAGCACCTGTCGGTCCACCCCGATGCCTACATCCGCCCCAGCCCGTCCAGCGGCACGCTGGGCGGCGTGGCCGAGA AGACGCGCGAGGCCATGCTGGTGTGCGAGGCTGCGGGCTATGACGTGGTCATCATCGAGACCGTGGGCGTGGGCCAGAGC GAGATCGCCGTGCAGGGCATGACCGACATGTTCTGCGTGCTGCAGTTGCCCAACGCGGGCGACGACCTGCAGGCCATCAA GAAGGGTGTGATGGAGCTGGCCGACCTGGTGGTCATCAACAAGGCCGACATCGACCCGCACGCCGCCACACGCGCGCAGG CGCAGATCACTTCCAGCCTGCGCCTGCTGTCCATGCATGGCAACCCCGAGCATGCGCACCACGACGAATCCCTGTGGACG CCGAAGGTCATCACGCTCAGCGCGCTGAAAGGCGAGGGGGTGGATGGCTTCTGGGCCGCGGTGCAGGAGTTCCGCCGCCT GCAGACGGCCAACGGCCGCCTGGCCGCGCGGCGCGAGCGGCAATCACTGGCGTGGATGTGGGAGCGCATCGACGCAGGCC TGAAGCAGGCCTTCCGCCAGCACCCGCAGGTGCGCGAGCTGCTGCCCCGCCTGCAGCAGGACGTGGCCGCGGGGCGCGTA GCGGCTTCCACTGCAGCACGAAATTTGCTTGCGGCGCAATCTGGACAAGCGCTGCAAGCTACTATTTAA
Upstream 100 bases:
>100_bases TCCTCTACGGTGCAGGCGTCAAGGGCGTCTATGGTCCCGGCACGCCGATCCCGGCCAGCGCCAAGGATGTGCTGGAGCAA ATCAAGAAGGCGCAGGCGCA
Downstream 100 bases:
>100_bases ATAGCACTTCACTGAAAGAGCGACCATGCAAGACATCCTGGATCAACTGGAGAAAAAGCGCGAACTCGCCCGCCTGGGCG GTGGCCAGAAGCGCATCGAC
Product: arginine/ornithine transport system ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTPQQLQEGILHGAPAVRRRAMAKAITLLESTRADHRTQGDELLTALLPHTGRAFRLGISGVPGVGKSTFIEALGLHLIA QGLKVAVLAIDPSSTVSGGSILGDKTRMEHLSVHPDAYIRPSPSSGTLGGVAEKTREAMLVCEAAGYDVVIIETVGVGQS EIAVQGMTDMFCVLQLPNAGDDLQAIKKGVMELADLVVINKADIDPHAATRAQAQITSSLRLLSMHGNPEHAHHDESLWT PKVITLSALKGEGVDGFWAAVQEFRRLQTANGRLAARRERQSLAWMWERIDAGLKQAFRQHPQVRELLPRLQQDVAAGRV AASTAARNLLAAQSGQALQATI
Sequences:
>Translated_342_residues MTPQQLQEGILHGAPAVRRRAMAKAITLLESTRADHRTQGDELLTALLPHTGRAFRLGISGVPGVGKSTFIEALGLHLIA QGLKVAVLAIDPSSTVSGGSILGDKTRMEHLSVHPDAYIRPSPSSGTLGGVAEKTREAMLVCEAAGYDVVIIETVGVGQS EIAVQGMTDMFCVLQLPNAGDDLQAIKKGVMELADLVVINKADIDPHAATRAQAQITSSLRLLSMHGNPEHAHHDESLWT PKVITLSALKGEGVDGFWAAVQEFRRLQTANGRLAARRERQSLAWMWERIDAGLKQAFRQHPQVRELLPRLQQDVAAGRV AASTAARNLLAAQSGQALQATI >Mature_341_residues TPQQLQEGILHGAPAVRRRAMAKAITLLESTRADHRTQGDELLTALLPHTGRAFRLGISGVPGVGKSTFIEALGLHLIAQ GLKVAVLAIDPSSTVSGGSILGDKTRMEHLSVHPDAYIRPSPSSGTLGGVAEKTREAMLVCEAAGYDVVIIETVGVGQSE IAVQGMTDMFCVLQLPNAGDDLQAIKKGVMELADLVVINKADIDPHAATRAQAQITSSLRLLSMHGNPEHAHHDESLWTP KVITLSALKGEGVDGFWAAVQEFRRLQTANGRLAARRERQSLAWMWERIDAGLKQAFRQHPQVRELLPRLQQDVAAGRVA ASTAARNLLAAQSGQALQATI
Specific function: May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone [H]
COG id: COG1703
COG function: function code E; Putative periplasmic protein kinase ArgK and related GTPases of G3E family
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgK family [H]
Homologues:
Organism=Homo sapiens, GI26892295, Length=339, Percent_Identity=46.9026548672566, Blast_Score=287, Evalue=9e-78, Organism=Escherichia coli, GI1789285, Length=269, Percent_Identity=52.4163568773234, Blast_Score=273, Evalue=8e-75, Organism=Caenorhabditis elegans, GI71994271, Length=339, Percent_Identity=43.0678466076696, Blast_Score=264, Evalue=4e-71, Organism=Caenorhabditis elegans, GI71994275, Length=278, Percent_Identity=45.6834532374101, Blast_Score=247, Evalue=5e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005129 - InterPro: IPR003593 [H]
Pfam domain/function: PF03308 ArgK [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 36653; Mature: 36521
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQQLQEGILHGAPAVRRRAMAKAITLLESTRADHRTQGDELLTALLPHTGRAFRLGIS CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHCCCCCEEEEECC GVPGVGKSTFIEALGLHLIAQGLKVAVLAIDPSSTVSGGSILGDKTRMEHLSVHPDAYIR CCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHEECCCCCEEC PSPSSGTLGGVAEKTREAMLVCEAAGYDVVIIETVGVGQSEIAVQGMTDMFCVLQLPNAG CCCCCCCCCHHHHHHHHHEEEEECCCCCEEEEEEECCCCHHHHHHCCHHEEEEEECCCCC DDLQAIKKGVMELADLVVINKADIDPHAATRAQAQITSSLRLLSMHGNPEHAHHDESLWT HHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC PKVITLSALKGEGVDGFWAAVQEFRRLQTANGRLAARRERQSLAWMWERIDAGLKQAFRQ CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HPQVRELLPRLQQDVAAGRVAASTAARNLLAAQSGQALQATI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure TPQQLQEGILHGAPAVRRRAMAKAITLLESTRADHRTQGDELLTALLPHTGRAFRLGIS CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHCCCCCEEEEECC GVPGVGKSTFIEALGLHLIAQGLKVAVLAIDPSSTVSGGSILGDKTRMEHLSVHPDAYIR CCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHEECCCCCEEC PSPSSGTLGGVAEKTREAMLVCEAAGYDVVIIETVGVGQSEIAVQGMTDMFCVLQLPNAG CCCCCCCCCHHHHHHHHHEEEEECCCCCEEEEEEECCCCHHHHHHCCHHEEEEEECCCCC DDLQAIKKGVMELADLVVINKADIDPHAATRAQAQITSSLRLLSMHGNPEHAHHDESLWT HHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC PKVITLSALKGEGVDGFWAAVQEFRRLQTANGRLAARRERQSLAWMWERIDAGLKQAFRQ CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HPQVRELLPRLQQDVAAGRVAASTAARNLLAAQSGQALQATI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Arg [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]