| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is mutB [H]
Identifier: 222111042
GI number: 222111042
Start: 1968258
End: 1970420
Strand: Direct
Name: mutB [H]
Synonym: Dtpsy_1849
Alternate gene names: 222111042
Gene position: 1968258-1970420 (Clockwise)
Preceding gene: 222111039
Following gene: 222111043
Centisome position: 51.84
GC content: 64.77
Gene sequence:
>2163_bases ATGAGCAGCCATCCTGATCCCATCTTCCAGTCCGCCGACCTTGCCGCCTGGGCCAAGGCCGCGGCCAAGTCCGCGCCCGG CGGCGACGTGAATGCCCTGAACTGGGTGACGCCCGACGGCATCAGCGTGAAGCCCCTGTACACGGCGCAAGACACGCAGG ACCTGCCCTACGCCAACACGCTGCCGGGCTTCGAGCCCTACCTGCGCGGCCCGCAGGCCACCATGTACGCCGTGCGCCCC TGGACCATCCGCCAGTACGCGGGCTTTTCCACGGCCGAAGAATCCAACGCCTTCTACCGCAAAGCGCTGGCCGCGGGCGG GCAGGGTGTGTCGGTGGCCTTTGACCTGGCCACGCACCGCGGCTACGACTCCGACCACCCGCGCGTGACGGGCGACGTGG GCAAGGCGGGCGTCGCCATCGACAGCGTGGAGGACATGAAGATCCTGTTCGACGGCATTCCGCTGGACAAGGTGTCTGTT TCCATGACCATGAACGGCGCCGTGCTGCCCGTGCTGGCCGGCTACGTGGTGGCAGCCGAGGAGCAGGGCGTGAGCCAGGA CAAGCTGGCCGGGACCATCCAGAACGACATCCTCAAGGAGTTCATGGTCCGCAACACCTACATCTATCCGCCCAAGCCGT CGATGCGCATCATCGGCGACATCATCGAGTACACGAGCAAGAACATGCCCAAGTTCAACTCGATCTCGATCTCGGGCTAC CACATGCAGGAAGCCGGCGCCAACCAGGCGCTGGAACTGGCCTTCACCCTGGCCGACGGCAAGGAATACGTGAAGACGGC CATCGCCAAGGGCATGGACGTGGACGATTTCGCCGGGCGCCTGTCGTTCTTCTGGGCGATCGGCATGAACTTCTACCTGG AGATCGCCAAGATGCGCGCCGCGCGCCTGCTGTGGTGCCGCATCATGAAGGGCTTCAACGCCAAAAACCCCAAGAGCCTG ATGCTGCGCACGCACTGCCAGACCTCGGGCTGGTCGCTCACCGAGCAGGACCCGTACAACAACGTGGTGCGCACCACCAT CGAGGCCATGGCGGCCGTGTTCGGCGGCACGCAAAGCCTGCACACCAACGCGCTGGACGAAGCCATCGCGCTGCCCACCG AATTCAGCGCACGCATCGCGCGCAACACGCAGCTCATCATCCAGGAAGAGACCCACATCACCAACGTGATCGACCCCTGG GCCGGCTCCTACATGATGGAAAAGCTCACCCAGGACATGGCCGACGCCGCCTGGAAGATCATCGAAGAGGTCGAGGCGAT GGGCGGCATGACCGCCGCCGTGGACTCGGGCTGGGCCAAGCTCAAGATCGAGGCCGCGGCTGCGGAGAAGCAGGCGCGCA TCGATTCGGGCAAGGAGGTCATCGTCGGCGTGAACAAGTACAAGCTTGCCAAGGAAGACCCGGTGGACATCCTGGAGGTG GACAACGTCAAGGTGCGCGAGAACCAGATCGCGCGCCTCAACGCCATCAAGGCAAAACGCGATCAAAGCGCCGTGGATCA AGCGCTGGCTGCTCTTACTTCTGCAGCAGAGAGCGGCCAGGGCAACCTGCTGGATCTGTCGATCCAGGCGATTCGCGCAC GCGCCACGGTGGGCGAGGTGTCCGACGCACTGGAAAAAATCTTCGGGCGCCACCGCGCCGATACGCAAAAGGTGACCGGT GTGTACGCTGCTGCCTACGACTCGGCCGAAGGCTGGGAAAAGCTCAAGGGTGAAATCGATCAGGCCGCCGAACAGCTCGG TCGCCGCCCGCGCGTGATGATCGCGAAGCTCGGCCAAGACGGCCACGACCGTGGCGCCAAGGTGGTGGCCACAGCCTTTG CCGACCTGGGGTTCGATGTCGACATGGGCCCGCTGTTCCAGACCCCCGAGGAGTGCGCGCGCCAGGCCATCGAGAACGAC GTGCACGCCGTGGGCGTCTCCACCCTGGCCGCGGGCCACAAGACGCTGGTGCCCGCCATCATCGAAGAACTGAAAAAGCA GGGCGCCGACGACATCATCGTCTTCGTGGGCGGCGTGGTGCCCGCGCAGGACTACGACTTCCTCTACGGTGCAGGCGTCA AGGGCGTCTATGGTCCCGGCACGCCGATCCCGGCCAGCGCCAAGGATGTGCTGGAGCAAATCAAGAAGGCGCAGGCGCAG TGA
Upstream 100 bases:
>100_bases TAAGAATTAATAATTACAGATCAGGTAAACTCCGCAAAATTGCGAAAACGCAGCACGCATAACCACATCTCTTTGCCATC TTTGCGAAAGCGCCCCCGCC
Downstream 100 bases:
>100_bases CCCCCCAGCAGCTGCAAGAAGGCATCCTGCACGGCGCGCCCGCCGTGCGGCGCCGCGCCATGGCCAAGGCCATCACGCTG CTGGAATCCACGCGGGCCGA
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-alpha [H]
Number of amino acids: Translated: 720; Mature: 719
Protein sequence:
>720_residues MSSHPDPIFQSADLAAWAKAAAKSAPGGDVNALNWVTPDGISVKPLYTAQDTQDLPYANTLPGFEPYLRGPQATMYAVRP WTIRQYAGFSTAEESNAFYRKALAAGGQGVSVAFDLATHRGYDSDHPRVTGDVGKAGVAIDSVEDMKILFDGIPLDKVSV SMTMNGAVLPVLAGYVVAAEEQGVSQDKLAGTIQNDILKEFMVRNTYIYPPKPSMRIIGDIIEYTSKNMPKFNSISISGY HMQEAGANQALELAFTLADGKEYVKTAIAKGMDVDDFAGRLSFFWAIGMNFYLEIAKMRAARLLWCRIMKGFNAKNPKSL MLRTHCQTSGWSLTEQDPYNNVVRTTIEAMAAVFGGTQSLHTNALDEAIALPTEFSARIARNTQLIIQEETHITNVIDPW AGSYMMEKLTQDMADAAWKIIEEVEAMGGMTAAVDSGWAKLKIEAAAAEKQARIDSGKEVIVGVNKYKLAKEDPVDILEV DNVKVRENQIARLNAIKAKRDQSAVDQALAALTSAAESGQGNLLDLSIQAIRARATVGEVSDALEKIFGRHRADTQKVTG VYAAAYDSAEGWEKLKGEIDQAAEQLGRRPRVMIAKLGQDGHDRGAKVVATAFADLGFDVDMGPLFQTPEECARQAIEND VHAVGVSTLAAGHKTLVPAIIEELKKQGADDIIVFVGGVVPAQDYDFLYGAGVKGVYGPGTPIPASAKDVLEQIKKAQAQ
Sequences:
>Translated_720_residues MSSHPDPIFQSADLAAWAKAAAKSAPGGDVNALNWVTPDGISVKPLYTAQDTQDLPYANTLPGFEPYLRGPQATMYAVRP WTIRQYAGFSTAEESNAFYRKALAAGGQGVSVAFDLATHRGYDSDHPRVTGDVGKAGVAIDSVEDMKILFDGIPLDKVSV SMTMNGAVLPVLAGYVVAAEEQGVSQDKLAGTIQNDILKEFMVRNTYIYPPKPSMRIIGDIIEYTSKNMPKFNSISISGY HMQEAGANQALELAFTLADGKEYVKTAIAKGMDVDDFAGRLSFFWAIGMNFYLEIAKMRAARLLWCRIMKGFNAKNPKSL MLRTHCQTSGWSLTEQDPYNNVVRTTIEAMAAVFGGTQSLHTNALDEAIALPTEFSARIARNTQLIIQEETHITNVIDPW AGSYMMEKLTQDMADAAWKIIEEVEAMGGMTAAVDSGWAKLKIEAAAAEKQARIDSGKEVIVGVNKYKLAKEDPVDILEV DNVKVRENQIARLNAIKAKRDQSAVDQALAALTSAAESGQGNLLDLSIQAIRARATVGEVSDALEKIFGRHRADTQKVTG VYAAAYDSAEGWEKLKGEIDQAAEQLGRRPRVMIAKLGQDGHDRGAKVVATAFADLGFDVDMGPLFQTPEECARQAIEND VHAVGVSTLAAGHKTLVPAIIEELKKQGADDIIVFVGGVVPAQDYDFLYGAGVKGVYGPGTPIPASAKDVLEQIKKAQAQ >Mature_719_residues SSHPDPIFQSADLAAWAKAAAKSAPGGDVNALNWVTPDGISVKPLYTAQDTQDLPYANTLPGFEPYLRGPQATMYAVRPW TIRQYAGFSTAEESNAFYRKALAAGGQGVSVAFDLATHRGYDSDHPRVTGDVGKAGVAIDSVEDMKILFDGIPLDKVSVS MTMNGAVLPVLAGYVVAAEEQGVSQDKLAGTIQNDILKEFMVRNTYIYPPKPSMRIIGDIIEYTSKNMPKFNSISISGYH MQEAGANQALELAFTLADGKEYVKTAIAKGMDVDDFAGRLSFFWAIGMNFYLEIAKMRAARLLWCRIMKGFNAKNPKSLM LRTHCQTSGWSLTEQDPYNNVVRTTIEAMAAVFGGTQSLHTNALDEAIALPTEFSARIARNTQLIIQEETHITNVIDPWA GSYMMEKLTQDMADAAWKIIEEVEAMGGMTAAVDSGWAKLKIEAAAAEKQARIDSGKEVIVGVNKYKLAKEDPVDILEVD NVKVRENQIARLNAIKAKRDQSAVDQALAALTSAAESGQGNLLDLSIQAIRARATVGEVSDALEKIFGRHRADTQKVTGV YAAAYDSAEGWEKLKGEIDQAAEQLGRRPRVMIAKLGQDGHDRGAKVVATAFADLGFDVDMGPLFQTPEECARQAIENDV HAVGVSTLAAGHKTLVPAIIEELKKQGADDIIVFVGGVVPAQDYDFLYGAGVKGVYGPGTPIPASAKDVLEQIKKAQAQ
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=702, Percent_Identity=65.3846153846154, Blast_Score=966, Evalue=0.0, Organism=Escherichia coli, GI1789284, Length=711, Percent_Identity=62.1659634317862, Blast_Score=897, Evalue=0.0, Organism=Caenorhabditis elegans, GI25144500, Length=701, Percent_Identity=64.1940085592011, Blast_Score=934, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 77804; Mature: 77673
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00544 METMALONYL_COA_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHPDPIFQSADLAAWAKAAAKSAPGGDVNALNWVTPDGISVKPLYTAQDTQDLPYANT CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCC LPGFEPYLRGPQATMYAVRPWTIRQYAGFSTAEESNAFYRKALAAGGQGVSVAFDLATHR CCCCHHHHCCCCCEEEEECCEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHCC GYDSDHPRVTGDVGKAGVAIDSVEDMKILFDGIPLDKVSVSMTMNGAVLPVLAGYVVAAE CCCCCCCEEECCCCCCCEEECCHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHEEEC EQGVSQDKLAGTIQNDILKEFMVRNTYIYPPKPSMRIIGDIIEYTSKNMPKFNSISISGY CCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECE HMQEAGANQALELAFTLADGKEYVKTAIAKGMDVDDFAGRLSFFWAIGMNFYLEIAKMRA EHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLLWCRIMKGFNAKNPKSLMLRTHCQTSGWSLTEQDPYNNVVRTTIEAMAAVFGGTQSL HHHHHHHHHHCCCCCCCHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH HTNALDEAIALPTEFSARIARNTQLIIQEETHITNVIDPWAGSYMMEKLTQDMADAAWKI HHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH IEEVEAMGGMTAAVDSGWAKLKIEAAAAEKQARIDSGKEVIVGVNKYKLAKEDPVDILEV HHHHHHHCCCEEECCCCCEEEEEEHHHHHHHHHCCCCCEEEEECCCEECCCCCCCCEEEC DNVKVRENQIARLNAIKAKRDQSAVDQALAALTSAAESGQGNLLDLSIQAIRARATVGEV CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH SDALEKIFGRHRADTQKVTGVYAAAYDSAEGWEKLKGEIDQAAEQLGRRPRVMIAKLGQD HHHHHHHHHHCCCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC GHDRGAKVVATAFADLGFDVDMGPLFQTPEECARQAIENDVHAVGVSTLAAGHKTLVPAI CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH IEELKKQGADDIIVFVGGVVPAQDYDFLYGAGVKGVYGPGTPIPASAKDVLEQIKKAQAQ HHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SSHPDPIFQSADLAAWAKAAAKSAPGGDVNALNWVTPDGISVKPLYTAQDTQDLPYANT CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCC LPGFEPYLRGPQATMYAVRPWTIRQYAGFSTAEESNAFYRKALAAGGQGVSVAFDLATHR CCCCHHHHCCCCCEEEEECCEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHCC GYDSDHPRVTGDVGKAGVAIDSVEDMKILFDGIPLDKVSVSMTMNGAVLPVLAGYVVAAE CCCCCCCEEECCCCCCCEEECCHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHEEEC EQGVSQDKLAGTIQNDILKEFMVRNTYIYPPKPSMRIIGDIIEYTSKNMPKFNSISISGY CCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECE HMQEAGANQALELAFTLADGKEYVKTAIAKGMDVDDFAGRLSFFWAIGMNFYLEIAKMRA EHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLLWCRIMKGFNAKNPKSLMLRTHCQTSGWSLTEQDPYNNVVRTTIEAMAAVFGGTQSL HHHHHHHHHHCCCCCCCHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH HTNALDEAIALPTEFSARIARNTQLIIQEETHITNVIDPWAGSYMMEKLTQDMADAAWKI HHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH IEEVEAMGGMTAAVDSGWAKLKIEAAAAEKQARIDSGKEVIVGVNKYKLAKEDPVDILEV HHHHHHHCCCEEECCCCCEEEEEEHHHHHHHHHCCCCCEEEEECCCEECCCCCCCCEEEC DNVKVRENQIARLNAIKAKRDQSAVDQALAALTSAAESGQGNLLDLSIQAIRARATVGEV CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH SDALEKIFGRHRADTQKVTGVYAAAYDSAEGWEKLKGEIDQAAEQLGRRPRVMIAKLGQD HHHHHHHHHHCCCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC GHDRGAKVVATAFADLGFDVDMGPLFQTPEECARQAIENDVHAVGVSTLAAGHKTLVPAI CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH IEELKKQGADDIIVFVGGVVPAQDYDFLYGAGVKGVYGPGTPIPASAKDVLEQIKKAQAQ HHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566763; 12949112 [H]