| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222111000
Identifier: 222111000
GI number: 222111000
Start: 1923422
End: 1923703
Strand: Direct
Name: 222111000
Synonym: Dtpsy_1807
Alternate gene names: NA
Gene position: 1923422-1923703 (Clockwise)
Preceding gene: 222110996
Following gene: 222111001
Centisome position: 50.66
GC content: 53.19
Gene sequence:
>282_bases ATGTCAGAACCCCACATTCACGCCAGTCATCCTGCGTTGATCAACCGACTCAAGCGAGCGAATGGTCACCTGGGCAGCGT GATCGCCATGCTGGAGGACGGTCGTTCTTGCGTAGATGTCGCCCAGCAGTTGCAAGCAGTTGAAAAAGCTATCCAACAGG CCAAAAAAACGCTGATTCAAGACCACATTGACCACTGCCTGGAGCATGCGATGCGTGGCGACCACCAGCACGGGCAAGGA CACGATTTCTCTGAGTTCAAAGAAATCACCAGATACCTCTGA
Upstream 100 bases:
>100_bases CAGGCAAAGCAGGCTCGAGGGCCAGCGCCTGCCCTTTGACTGGCGCATAATTTGGAAATTCTAGCATCCCCCCCAGGGGG ATAAACCTAAAGGGCATTGC
Downstream 100 bases:
>100_bases TCTGCTCGCAATCCCGCCACCACCCGCGCACTTCATGTCCGAACAATCAATCTGCTGAAGCATGTCCATCCGTAATGCTG CCCCCGCACTGGCTGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSEPHIHASHPALINRLKRANGHLGSVIAMLEDGRSCVDVAQQLQAVEKAIQQAKKTLIQDHIDHCLEHAMRGDHQHGQG HDFSEFKEITRYL
Sequences:
>Translated_93_residues MSEPHIHASHPALINRLKRANGHLGSVIAMLEDGRSCVDVAQQLQAVEKAIQQAKKTLIQDHIDHCLEHAMRGDHQHGQG HDFSEFKEITRYL >Mature_92_residues SEPHIHASHPALINRLKRANGHLGSVIAMLEDGRSCVDVAQQLQAVEKAIQQAKKTLIQDHIDHCLEHAMRGDHQHGQGH DFSEFKEITRYL
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10495; Mature: 10364
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPHIHASHPALINRLKRANGHLGSVIAMLEDGRSCVDVAQQLQAVEKAIQQAKKTLIQ CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH DHIDHCLEHAMRGDHQHGQGHDFSEFKEITRYL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SEPHIHASHPALINRLKRANGHLGSVIAMLEDGRSCVDVAQQLQAVEKAIQQAKKTLIQ CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH DHIDHCLEHAMRGDHQHGQGHDFSEFKEITRYL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA